RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 NCOA4Q13772 614 aa18.53■□□□□ 0.56
TMEM53-209ENST00000495630 STK38Q15208 465 aa18.53■□□□□ 0.56
TMEM53-209ENST00000495630 KLHDC10Q6PID8 442 aa18.53■□□□□ 0.56
TMEM53-209ENST00000495630 TOGARAM2Q6ZUX3 1019 aa18.53■□□□□ 0.56
TMEM53-209ENST00000495630 UNC13DQ70J99 1090 aa18.53■□□□□ 0.56
TMEM53-209ENST00000495630 UNC93AQ86WB7 457 aa18.53■□□□□ 0.56
TMEM53-209ENST00000495630 PARD3BQ8TEW8 1205 aa18.53■□□□□ 0.56
TMEM53-209ENST00000495630 DNASE2BQ8WZ79 361 aa18.53■□□□□ 0.56
TMEM53-209ENST00000495630 DHX58Q96C10 678 aa18.53■□□□□ 0.56
TMEM53-209ENST00000495630 KRT82Q9NSB4 513 aa18.53■□□□□ 0.56
TMEM53-209ENST00000495630 FBXO10Q9UK96 956 aa18.53■□□□□ 0.56
TMEM53-209ENST00000495630 SCML2Q9UQR0 700 aa18.53■□□□□ 0.56
TMEM53-209ENST00000495630 MTMR6Q9Y217 621 aa18.53■□□□□ 0.56
TMEM53-209ENST00000495630 DSPP15924 2871 aaKnown RBP18.52■□□□□ 0.56
TMEM53-209ENST00000495630 FASNP49327 2511 aaKnown RBP18.52■□□□□ 0.56
TMEM53-209ENST00000495630 PPP6R2O75170 966 aa18.52■□□□□ 0.56
TMEM53-209ENST00000495630 CD6P30203 668 aa18.52■□□□□ 0.56
TMEM53-209ENST00000495630 PLA2G4AP47712 749 aa18.52■□□□□ 0.56
TMEM53-209ENST00000495630 CASP4P49662 377 aa18.52■□□□□ 0.56
TMEM53-209ENST00000495630 MAP3K7CLP57077 242 aa18.52■□□□□ 0.56
TMEM53-209ENST00000495630 SCAPQ12770 1279 aa18.52■□□□□ 0.56
TMEM53-209ENST00000495630 KNOP1Q1ED39 458 aaKnown RBP18.52■□□□□ 0.56
TMEM53-209ENST00000495630 SGSM1Q2NKQ1 1148 aa18.52■□□□□ 0.56
TMEM53-209ENST00000495630 CCNI2Q6ZMN8 369 aaPredicted RBP18.52■□□□□ 0.56
TMEM53-209ENST00000495630 CADM4Q8NFZ8 388 aa18.52■□□□□ 0.56
TMEM53-209ENST00000495630 GOLGA5Q8TBA6 731 aa18.52■□□□□ 0.56
TMEM53-209ENST00000495630 PLEKHO2Q8TD55 490 aa18.52■□□□□ 0.56
TMEM53-209ENST00000495630 SLC2A14Q8TDB8 520 aa18.52■□□□□ 0.56
TMEM53-209ENST00000495630 SDCBP2Q9H190 292 aa18.52■□□□□ 0.56
TMEM53-209ENST00000495630 ITM2CQ9NQX7 267 aa18.52■□□□□ 0.56
TMEM53-209ENST00000495630 CACNA2D2Q9NY47 1150 aa18.52■□□□□ 0.56
TMEM53-209ENST00000495630 TFIP11Q9UBB9 837 aaKnown RBP18.52■□□□□ 0.56
TMEM53-209ENST00000495630 APOBEC2Q9Y235 224 aaKnown RBP18.52■□□□□ 0.56
TMEM53-209ENST00000495630 RAD54BQ9Y620 910 aa18.52■□□□□ 0.56
TMEM53-209ENST00000495630 A0A1B0GTW7 788 aa18.51■□□□□ 0.55
TMEM53-209ENST00000495630 PVALEFA0A1B0GWK0 134 aa18.51■□□□□ 0.55
TMEM53-209ENST00000495630 WASH3PC4AMC7 463 aa18.51■□□□□ 0.55
TMEM53-209ENST00000495630 NPC1O15118 1278 aa18.51■□□□□ 0.55
TMEM53-209ENST00000495630 SPTLC2O15270 562 aa18.51■□□□□ 0.55
TMEM53-209ENST00000495630 RPN1P04843 607 aaKnown RBP18.51■□□□□ 0.55
TMEM53-209ENST00000495630 MAOBP27338 520 aa18.51■□□□□ 0.55
TMEM53-209ENST00000495630 KIAA1324Q6UXG2 1013 aaKnown RBP18.51■□□□□ 0.55
TMEM53-209ENST00000495630 GLRX5Q86SX6 157 aa18.51■□□□□ 0.55
TMEM53-209ENST00000495630 NAXDQ8IW45 347 aa18.51■□□□□ 0.55
TMEM53-209ENST00000495630 SLC6A17Q9H1V8 727 aa18.51■□□□□ 0.55
TMEM53-209ENST00000495630 MAGEF1Q9HAY2 307 aa18.51■□□□□ 0.55
TMEM53-209ENST00000495630 OSER1Q9NX31 292 aa18.51■□□□□ 0.55
TMEM53-209ENST00000495630 WSB2Q9NYS7 404 aaPredicted RBP18.51■□□□□ 0.55
TMEM53-209ENST00000495630 DNMT3LQ9UJW3 386 aa18.51■□□□□ 0.55
TMEM53-209ENST00000495630 SLC27A6Q9Y2P4 619 aa18.51■□□□□ 0.55
TMEM53-209ENST00000495630 GPSM3Q9Y4H4 160 aa18.51■□□□□ 0.55
TMEM53-209ENST00000495630 STON1Q9Y6Q2 735 aa18.51■□□□□ 0.55
TMEM53-209ENST00000495630 PCDH15Q96QU1 1955 aa18.51■□□□□ 0.55
TMEM53-209ENST00000495630 WDFY3Q8IZQ1 3526 aa18.51■□□□□ 0.55
TMEM53-209ENST00000495630 LRRIQ3A6PVS8 624 aaPredicted RBP18.5■□□□□ 0.55
TMEM53-209ENST00000495630 CLSTN1O94985 981 aa18.5■□□□□ 0.55
TMEM53-209ENST00000495630 VNN1O95497 513 aa18.5■□□□□ 0.55
TMEM53-209ENST00000495630 FTH1P19P0C7X4 201 aa18.5■□□□□ 0.55
TMEM53-209ENST00000495630 CCDC130P13994 396 aa18.5■□□□□ 0.55
TMEM53-209ENST00000495630 TRIM21P19474 475 aaKnown RBP18.5■□□□□ 0.55
TMEM53-209ENST00000495630 NDST1P52848 882 aa18.5■□□□□ 0.55
TMEM53-209ENST00000495630 GRIK2Q13002 908 aa18.5■□□□□ 0.55
TMEM53-209ENST00000495630 STARD3Q14849 445 aa18.5■□□□□ 0.55
TMEM53-209ENST00000495630 SCARA5Q6ZMJ2 495 aa18.5■□□□□ 0.55
TMEM53-209ENST00000495630 Q6ZNB5 142 aa18.5■□□□□ 0.55
TMEM53-209ENST00000495630 ZNF276Q8N554 614 aa18.5■□□□□ 0.55
TMEM53-209ENST00000495630 TAF4BQ92750 862 aa18.5■□□□□ 0.55
TMEM53-209ENST00000495630 ERLEC1Q96DZ1 483 aa18.5■□□□□ 0.55
TMEM53-209ENST00000495630 TOE1Q96GM8 510 aaKnown RBP18.5■□□□□ 0.55
TMEM53-209ENST00000495630 INTS4Q96HW7 963 aaKnown RBP18.5■□□□□ 0.55
TMEM53-209ENST00000495630 HNRNPABQ99729 332 aaKnown RBP18.5■□□□□ 0.55
TMEM53-209ENST00000495630 PRDM16Q9HAZ2 1276 aa18.5■□□□□ 0.55
TMEM53-209ENST00000495630 SLC39A2Q9NP94 309 aa18.5■□□□□ 0.55
TMEM53-209ENST00000495630 CD93Q9NPY3 652 aa18.5■□□□□ 0.55
TMEM53-209ENST00000495630 KIAA1522Q9P206 1035 aaPredicted RBP18.5■□□□□ 0.55
TMEM53-209ENST00000495630 ZNF510Q9Y2H8 683 aa18.5■□□□□ 0.55
TMEM53-209ENST00000495630 ADAMTS9Q9P2N4 1935 aa18.49■□□□□ 0.55
TMEM53-209ENST00000495630 CUTAO60888 179 aa18.49■□□□□ 0.55
TMEM53-209ENST00000495630 CBFA2T3O75081 653 aa18.49■□□□□ 0.55
TMEM53-209ENST00000495630 FAM200BP0CF97 657 aa18.49■□□□□ 0.55
TMEM53-209ENST00000495630 ACO1P21399 889 aaKnown RBP18.49■□□□□ 0.55
TMEM53-209ENST00000495630 OXTRP30559 389 aa18.49■□□□□ 0.55
TMEM53-209ENST00000495630 ENPP2Q13822 863 aa18.49■□□□□ 0.55
TMEM53-209ENST00000495630 E2F5Q15329 346 aa18.49■□□□□ 0.55
TMEM53-209ENST00000495630 FUT11Q495W5 492 aa18.49■□□□□ 0.55
TMEM53-209ENST00000495630 PNPLA1Q8N8W4 532 aa18.49■□□□□ 0.55
TMEM53-209ENST00000495630 C12orf29Q8N999 325 aa18.49■□□□□ 0.55
TMEM53-209ENST00000495630 TMEM174Q8WUU8 243 aa18.49■□□□□ 0.55
TMEM53-209ENST00000495630 CCDC86Q9H6F5 360 aaKnown RBP18.49■□□□□ 0.55
TMEM53-209ENST00000495630 PNPLA8Q9NP80 782 aa18.49■□□□□ 0.55
TMEM53-209ENST00000495630 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.49■□□□□ 0.55
TMEM53-209ENST00000495630 DMAC2Q9NW81 257 aa18.49■□□□□ 0.55
TMEM53-209ENST00000495630 USP36Q9P275 1121 aaKnown RBP18.49■□□□□ 0.55
TMEM53-209ENST00000495630 THAP10Q9P2Z0 257 aaPredicted RBP18.49■□□□□ 0.55
TMEM53-209ENST00000495630 PCDHA5Q9Y5H7 936 aa18.49■□□□□ 0.55
TMEM53-209ENST00000495630 CEP192Q8TEP8 1941 aa18.49■□□□□ 0.55
TMEM53-209ENST00000495630 FREM2Q5SZK8 3169 aa18.48■□□□□ 0.55
TMEM53-209ENST00000495630 METTL12A8MUP2 240 aa18.48■□□□□ 0.55
TMEM53-209ENST00000495630 HHLA1C9JL84 531 aa18.48■□□□□ 0.55
TMEM53-209ENST00000495630 ZNF883P0CG24 379 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms