RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 AKR1B10O60218 316 aa17.88■□□□□ 0.45
HDAC6-235ENST00000495515 PLEKP08567 350 aaPredicted RBP17.88■□□□□ 0.45
HDAC6-235ENST00000495515 EIF4A3P38919 411 aaKnown RBP17.88■□□□□ 0.45
HDAC6-235ENST00000495515 MRE11P49959 708 aa17.88■□□□□ 0.45
HDAC6-235ENST00000495515 GSCP56915 257 aaPredicted RBP17.88■□□□□ 0.45
HDAC6-235ENST00000495515 MAPK8IP2Q13387 824 aaPredicted RBP17.88■□□□□ 0.45
HDAC6-235ENST00000495515 ARHGAP29Q52LW3 1261 aa17.88■□□□□ 0.45
HDAC6-235ENST00000495515 MSANTD2Q6P1R3 559 aa17.88■□□□□ 0.45
HDAC6-235ENST00000495515 VITQ6UXI7 678 aa17.88■□□□□ 0.45
HDAC6-235ENST00000495515 MON1BQ7L1V2 547 aa17.88■□□□□ 0.45
HDAC6-235ENST00000495515 MIB1Q86YT6 1006 aa17.88■□□□□ 0.45
HDAC6-235ENST00000495515 TC2NQ8N9U0 490 aa17.88■□□□□ 0.45
HDAC6-235ENST00000495515 TTC16Q8NEE8 873 aa17.88■□□□□ 0.45
HDAC6-235ENST00000495515 RSAD2Q8WXG1 361 aa17.88■□□□□ 0.45
HDAC6-235ENST00000495515 ANP32BQ92688 251 aaKnown RBP17.88■□□□□ 0.45
HDAC6-235ENST00000495515 PANX2Q96RD6 677 aa17.88■□□□□ 0.45
HDAC6-235ENST00000495515 RRN3Q9NYV6 651 aa17.88■□□□□ 0.45
HDAC6-235ENST00000495515 LSM7Q9UK45 103 aaKnown RBP17.88■□□□□ 0.45
HDAC6-235ENST00000495515 CCL26Q9Y258 94 aa17.88■□□□□ 0.45
HDAC6-235ENST00000495515 SH3BP1Q9Y3L3 701 aa17.88■□□□□ 0.45
HDAC6-235ENST00000495515 FAM170AA1A519 330 aa17.87■□□□□ 0.45
HDAC6-235ENST00000495515 SLC9A3R1O14745 358 aaPredicted RBP17.87■□□□□ 0.45
HDAC6-235ENST00000495515 DAB1O75553 588 aa17.87■□□□□ 0.45
HDAC6-235ENST00000495515 FTLP02792 175 aaPredicted RBP17.87■□□□□ 0.45
HDAC6-235ENST00000495515 FCHO2Q0JRZ9 810 aa17.87■□□□□ 0.45
HDAC6-235ENST00000495515 USP4Q13107 963 aa17.87■□□□□ 0.45
HDAC6-235ENST00000495515 MTF1Q14872 753 aa17.87■□□□□ 0.45
HDAC6-235ENST00000495515 ZNF77Q15935 545 aa17.87■□□□□ 0.45
HDAC6-235ENST00000495515 C2CD6Q53TS8 623 aa17.87■□□□□ 0.45
HDAC6-235ENST00000495515 DCAF6Q58WW2 860 aa17.87■□□□□ 0.45
HDAC6-235ENST00000495515 UBALD2Q8IYN6 164 aa17.87■□□□□ 0.45
HDAC6-235ENST00000495515 MCOLN2Q8IZK6 566 aa17.87■□□□□ 0.45
HDAC6-235ENST00000495515 SPC24Q8NBT2 197 aa17.87■□□□□ 0.45
HDAC6-235ENST00000495515 ST13P5Q8NFI4 369 aaPredicted RBP17.87■□□□□ 0.45
HDAC6-235ENST00000495515 OLIG1Q8TAK6 271 aa17.87■□□□□ 0.45
HDAC6-235ENST00000495515 IRF7Q92985 503 aa17.87■□□□□ 0.45
HDAC6-235ENST00000495515 SERPINB11Q96P15 392 aa17.87■□□□□ 0.45
HDAC6-235ENST00000495515 SLC2A13Q96QE2 648 aa17.87■□□□□ 0.45
HDAC6-235ENST00000495515 RPP25Q9BUL9 199 aaKnown RBP17.87■□□□□ 0.45
HDAC6-235ENST00000495515 KLF16Q9BXK1 252 aaPredicted RBP17.87■□□□□ 0.45
HDAC6-235ENST00000495515 TMEM51Q9NW97 253 aa17.87■□□□□ 0.45
HDAC6-235ENST00000495515 CFAP97Q9P2B7 532 aa17.87■□□□□ 0.45
HDAC6-235ENST00000495515 STAP1Q9ULZ2 295 aa17.87■□□□□ 0.45
HDAC6-235ENST00000495515 NAALADL1Q9UQQ1 740 aa17.87■□□□□ 0.45
HDAC6-235ENST00000495515 HBS1LQ9Y450 684 aaKnown RBP17.87■□□□□ 0.45
HDAC6-235ENST00000495515 ZNF638Q14966 1978 aaKnown RBP17.86■□□□□ 0.45
HDAC6-235ENST00000495515 DOCK8Q8NF50 2099 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 SLC12A8A0AV02 714 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 E2F8A0AVK6 867 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 ANKRD62A6NC57 917 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 ZNF263O14978 683 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 MDM4O15151 490 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 CHADO15335 359 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 GRAP2O75791 330 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 FYNP06241 537 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 MYBL1P10243 752 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 SRFP11831 508 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 GDI1P31150 447 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 NOS2P35228 1153 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 MATKP42679 507 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 RNASE9P60153 205 aaKnown RBP17.86■□□□□ 0.45
HDAC6-235ENST00000495515 PFKPQ01813 784 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 PTP4A2Q12974 167 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 GRM2Q14416 872 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 TAF5Q15542 800 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 SLC18A3Q16572 532 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 DNAJC24Q6P3W2 148 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 ALKBH5Q6P6C2 394 aaKnown RBP17.86■□□□□ 0.45
HDAC6-235ENST00000495515 ARCQ7LC44 396 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 DEFB106AQ8N104 65 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 C3orf20Q8ND61 904 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 PLD4Q96BZ4 506 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 RSPRY1Q96DX4 576 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 PIWIL1Q96J94 861 aaKnown RBP17.86■□□□□ 0.45
HDAC6-235ENST00000495515 SELENOOQ9BVL4 669 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 PLA2G2FQ9BZM2 168 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 DCLK3Q9C098 648 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 ISCUQ9H1K1 167 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 SMOC2Q9H3U7 446 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 BRD9Q9H8M2 597 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 NHEJ1Q9H9Q4 299 aaPredicted RBP17.86■□□□□ 0.45
HDAC6-235ENST00000495515 CD320Q9NPF0 282 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 TAS2R14Q9NYV8 317 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.86■□□□□ 0.45
HDAC6-235ENST00000495515 TBC1D14Q9P2M4 693 aa17.86■□□□□ 0.45
HDAC6-235ENST00000495515 A0A087X0T9 212 aa17.85■□□□□ 0.45
HDAC6-235ENST00000495515 FAM228BP0C875 321 aa17.85■□□□□ 0.45
HDAC6-235ENST00000495515 KRT3P12035 628 aa17.85■□□□□ 0.45
HDAC6-235ENST00000495515 GBP1P32455 592 aa17.85■□□□□ 0.45
HDAC6-235ENST00000495515 GSDMDP57764 484 aa17.85■□□□□ 0.45
HDAC6-235ENST00000495515 NNTQ13423 1086 aa17.85■□□□□ 0.45
HDAC6-235ENST00000495515 PDGFRLQ15198 375 aa17.85■□□□□ 0.45
HDAC6-235ENST00000495515 CCDC122Q5T0U0 273 aa17.85■□□□□ 0.45
HDAC6-235ENST00000495515 DQX1Q8TE96 717 aaKnown RBP17.85■□□□□ 0.45
HDAC6-235ENST00000495515 ZFRQ96KR1 1074 aaKnown RBP17.85■□□□□ 0.45
HDAC6-235ENST00000495515 CHP1Q99653 195 aa17.85■□□□□ 0.45
HDAC6-235ENST00000495515 SLC2A4RGQ9NR83 387 aa17.85■□□□□ 0.45
HDAC6-235ENST00000495515 GKN1Q9NS71 199 aa17.85■□□□□ 0.45
HDAC6-235ENST00000495515 PARVAQ9NVD7 372 aa17.85■□□□□ 0.45
HDAC6-235ENST00000495515 SFMBT1Q9UHJ3 866 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms