RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 OLFML1Q6UWY5 402 aa20.33■□□□□ 0.85
HDAC4-212ENST00000495497 MMS22LQ6ZRQ5 1243 aa20.33■□□□□ 0.85
HDAC4-212ENST00000495497 TMC6Q7Z403 805 aa20.33■□□□□ 0.85
HDAC4-212ENST00000495497 XYLT1Q86Y38 959 aa20.33■□□□□ 0.85
HDAC4-212ENST00000495497 FMNL3Q8IVF7 1028 aa20.33■□□□□ 0.85
HDAC4-212ENST00000495497 OSCP1Q8WVF1 389 aa20.33■□□□□ 0.85
HDAC4-212ENST00000495497 C18orf8Q96DM3 657 aa20.33■□□□□ 0.85
HDAC4-212ENST00000495497 IQCDQ96DY2 449 aa20.33■□□□□ 0.85
HDAC4-212ENST00000495497 EBF3Q9H4W6 596 aa20.33■□□□□ 0.85
HDAC4-212ENST00000495497 HPS4Q9NQG7 708 aa20.33■□□□□ 0.85
HDAC4-212ENST00000495497 DUS2Q9NX74 493 aaKnown RBP20.33■□□□□ 0.85
HDAC4-212ENST00000495497 GTSE1Q9NYZ3 720 aa20.33■□□□□ 0.85
HDAC4-212ENST00000495497 MARCH2Q9P0N8 246 aa20.33■□□□□ 0.85
HDAC4-212ENST00000495497 SH3BP1Q9Y3L3 701 aa20.33■□□□□ 0.85
HDAC4-212ENST00000495497 NCOR1O75376 2440 aa20.32■□□□□ 0.84
HDAC4-212ENST00000495497 TMEM221A6NGB7 291 aa20.32■□□□□ 0.84
HDAC4-212ENST00000495497 M0R296 226 aa20.32■□□□□ 0.84
HDAC4-212ENST00000495497 MSI1O43347 362 aaKnown RBP20.32■□□□□ 0.84
HDAC4-212ENST00000495497 GREM1O60565 184 aa20.32■□□□□ 0.84
HDAC4-212ENST00000495497 PRKCIP41743 596 aa20.32■□□□□ 0.84
HDAC4-212ENST00000495497 IFNAR2P48551 515 aa20.32■□□□□ 0.84
HDAC4-212ENST00000495497 SLC6A3Q01959 620 aa20.32■□□□□ 0.84
HDAC4-212ENST00000495497 HGSNATQ68CP4 663 aa20.32■□□□□ 0.84
HDAC4-212ENST00000495497 TRIM72Q6ZMU5 477 aa20.32■□□□□ 0.84
HDAC4-212ENST00000495497 DDX42Q86XP3 938 aaKnown RBP eCLIP20.32■□□□□ 0.84
HDAC4-212ENST00000495497 SIX5Q8N196 739 aa20.32■□□□□ 0.84
HDAC4-212ENST00000495497 C11orf70Q9BRQ4 267 aa20.32■□□□□ 0.84
HDAC4-212ENST00000495497 OLA1Q9NTK5 396 aaKnown RBP20.32■□□□□ 0.84
HDAC4-212ENST00000495497 TAS2R14Q9NYV8 317 aa20.32■□□□□ 0.84
HDAC4-212ENST00000495497 WNT16Q9UBV4 365 aa20.32■□□□□ 0.84
HDAC4-212ENST00000495497 COL4A3Q01955 1670 aa20.32■□□□□ 0.84
HDAC4-212ENST00000495497 OTOL1A6NHN0 477 aaPredicted RBP20.31■□□□□ 0.84
HDAC4-212ENST00000495497 TMCO5BA8MYB1 307 aa20.31■□□□□ 0.84
HDAC4-212ENST00000495497 GOLGA8SH3BPF8 625 aa20.31■□□□□ 0.84
HDAC4-212ENST00000495497 CAPN9O14815 690 aa20.31■□□□□ 0.84
HDAC4-212ENST00000495497 PLEKP08567 350 aaPredicted RBP20.31■□□□□ 0.84
HDAC4-212ENST00000495497 SOX9P48436 509 aa20.31■□□□□ 0.84
HDAC4-212ENST00000495497 SNX16P57768 344 aa20.31■□□□□ 0.84
HDAC4-212ENST00000495497 RNASE9P60153 205 aaKnown RBP20.31■□□□□ 0.84
HDAC4-212ENST00000495497 YWHAZP63104 245 aaKnown RBP20.31■□□□□ 0.84
HDAC4-212ENST00000495497 PFKPQ01813 784 aa20.31■□□□□ 0.84
HDAC4-212ENST00000495497 CENPCQ03188 943 aa20.31■□□□□ 0.84
HDAC4-212ENST00000495497 EML3Q32P44 896 aa20.31■□□□□ 0.84
HDAC4-212ENST00000495497 EFHC1Q5JVL4 640 aa20.31■□□□□ 0.84
HDAC4-212ENST00000495497 DNAAF5Q86Y56 855 aa20.31■□□□□ 0.84
HDAC4-212ENST00000495497 DEFB106AQ8N104 65 aa20.31■□□□□ 0.84
HDAC4-212ENST00000495497 ADAM32Q8TC27 787 aa20.31■□□□□ 0.84
HDAC4-212ENST00000495497 CSGALNACT1Q8TDX6 532 aa20.31■□□□□ 0.84
HDAC4-212ENST00000495497 DNASE1L2Q92874 299 aa20.31■□□□□ 0.84
HDAC4-212ENST00000495497 NUCKS1Q9H1E3 243 aaKnown RBP20.31■□□□□ 0.84
HDAC4-212ENST00000495497 POPDC2Q9HBU9 364 aa20.31■□□□□ 0.84
HDAC4-212ENST00000495497 C11orf16Q9NQ32 467 aa20.31■□□□□ 0.84
HDAC4-212ENST00000495497 ARHGEF3Q9NR81 526 aa20.31■□□□□ 0.84
HDAC4-212ENST00000495497 STRIP2Q9ULQ0 834 aa20.31■□□□□ 0.84
HDAC4-212ENST00000495497 E2F8A0AVK6 867 aa20.3■□□□□ 0.84
HDAC4-212ENST00000495497 STC2O76061 302 aa20.3■□□□□ 0.84
HDAC4-212ENST00000495497 MMP8P22894 467 aa20.3■□□□□ 0.84
HDAC4-212ENST00000495497 NSFP46459 744 aaKnown RBP20.3■□□□□ 0.84
HDAC4-212ENST00000495497 ADKP55263 362 aaKnown RBP20.3■□□□□ 0.84
HDAC4-212ENST00000495497 PITX1P78337 314 aaPredicted RBP20.3■□□□□ 0.84
HDAC4-212ENST00000495497 PTP4A2Q12974 167 aa20.3■□□□□ 0.84
HDAC4-212ENST00000495497 RUNX3Q13761 415 aa20.3■□□□□ 0.84
HDAC4-212ENST00000495497 TRIM14Q14142 442 aa20.3■□□□□ 0.84
HDAC4-212ENST00000495497 MLF2Q15773 248 aaPredicted RBP20.3■□□□□ 0.84
HDAC4-212ENST00000495497 TDRD12Q587J7 1177 aaKnown RBP20.3■□□□□ 0.84
HDAC4-212ENST00000495497 FAM102AQ5T9C2 384 aaPredicted RBP20.3■□□□□ 0.84
HDAC4-212ENST00000495497 MSANTD2Q6P1R3 559 aa20.3■□□□□ 0.84
HDAC4-212ENST00000495497 TOGARAM2Q6ZUX3 1019 aa20.3■□□□□ 0.84
HDAC4-212ENST00000495497 BBS7Q8IWZ6 715 aa20.3■□□□□ 0.84
HDAC4-212ENST00000495497 MSANTD4Q8NCY6 345 aa20.3■□□□□ 0.84
HDAC4-212ENST00000495497 DQX1Q8TE96 717 aaKnown RBP20.3■□□□□ 0.84
HDAC4-212ENST00000495497 SYN2Q92777 582 aaPredicted RBP20.3■□□□□ 0.84
HDAC4-212ENST00000495497 ASNSD1Q9NWL6 643 aa20.3■□□□□ 0.84
HDAC4-212ENST00000495497 ADAM22Q9P0K1 906 aa20.3■□□□□ 0.84
HDAC4-212ENST00000495497 TRIOO75962 3097 aa20.3■□□□□ 0.84
HDAC4-212ENST00000495497 DDX3XO00571 662 aaKnown RBP eCLIP20.29■□□□□ 0.84
HDAC4-212ENST00000495497 GJB6O95452 261 aa20.29■□□□□ 0.84
HDAC4-212ENST00000495497 KLKB1P03952 638 aa20.29■□□□□ 0.84
HDAC4-212ENST00000495497 SERPING1P05155 500 aa20.29■□□□□ 0.84
HDAC4-212ENST00000495497 CD72P21854 359 aa20.29■□□□□ 0.84
HDAC4-212ENST00000495497 COG7P83436 770 aa20.29■□□□□ 0.84
HDAC4-212ENST00000495497 TBX2Q13207 712 aaPredicted RBP20.29■□□□□ 0.84
HDAC4-212ENST00000495497 PDGFRLQ15198 375 aa20.29■□□□□ 0.84
HDAC4-212ENST00000495497 DCAF6Q58WW2 860 aa20.29■□□□□ 0.84
HDAC4-212ENST00000495497 ACAD10Q6JQN1 1059 aa20.29■□□□□ 0.84
HDAC4-212ENST00000495497 HTR3DQ70Z44 454 aa20.29■□□□□ 0.84
HDAC4-212ENST00000495497 SLC26A9Q7LBE3 791 aa20.29■□□□□ 0.84
HDAC4-212ENST00000495497 ZDHHC17Q8IUH5 632 aa20.29■□□□□ 0.84
HDAC4-212ENST00000495497 SLC2A13Q96QE2 648 aa20.29■□□□□ 0.84
HDAC4-212ENST00000495497 TRPV5Q9NQA5 729 aa20.29■□□□□ 0.84
HDAC4-212ENST00000495497 PIAS3Q9Y6X2 628 aa20.29■□□□□ 0.84
HDAC4-212ENST00000495497 HELZP42694 1942 aaKnown RBP20.29■□□□□ 0.84
HDAC4-212ENST00000495497 SHISA7A6NL88 538 aa20.28■□□□□ 0.84
HDAC4-212ENST00000495497 HSF2BPO75031 334 aa20.28■□□□□ 0.84
HDAC4-212ENST00000495497 GLI1P08151 1106 aa20.28■□□□□ 0.84
HDAC4-212ENST00000495497 KPNA1P52294 538 aaPredicted RBP20.28■□□□□ 0.84
HDAC4-212ENST00000495497 ITPRIPL2Q3MIP1 535 aa20.28■□□□□ 0.84
HDAC4-212ENST00000495497 WDR59Q6PJI9 974 aa20.28■□□□□ 0.84
HDAC4-212ENST00000495497 TPRG1Q6ZUI0 275 aa20.28■□□□□ 0.84
HDAC4-212ENST00000495497 BEND5Q7L4P6 421 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms