RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 TPGS1Q6ZTW0 290 aa23.28■■□□□ 1.32
HDDC3-203ENST00000494993 NUSAP1Q9BXS6 441 aaKnown RBP23.28■■□□□ 1.32
HDDC3-203ENST00000494993 NIF3L1Q9GZT8 377 aa23.28■■□□□ 1.32
HDDC3-203ENST00000494993 TMEM74BQ9NUR3 256 aa23.28■■□□□ 1.32
HDDC3-203ENST00000494993 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.28■■□□□ 1.32
HDDC3-203ENST00000494993 WDR35Q9P2L0 1181 aa23.28■■□□□ 1.32
HDDC3-203ENST00000494993 FAM237AA0A1B0GTK4 181 aa23.27■■□□□ 1.32
HDDC3-203ENST00000494993 A0A1W2PQH9 124 aa23.27■■□□□ 1.32
HDDC3-203ENST00000494993 CILPO75339 1184 aa23.27■■□□□ 1.32
HDDC3-203ENST00000494993 RARGP13631 454 aa23.27■■□□□ 1.32
HDDC3-203ENST00000494993 KRT13P13646 458 aa23.27■■□□□ 1.32
HDDC3-203ENST00000494993 CSRP1P21291 193 aaKnown RBP23.27■■□□□ 1.32
HDDC3-203ENST00000494993 DPP6P42658 865 aa23.27■■□□□ 1.32
HDDC3-203ENST00000494993 WASP42768 502 aa23.27■■□□□ 1.32
HDDC3-203ENST00000494993 KRT85P78386 507 aa23.27■■□□□ 1.32
HDDC3-203ENST00000494993 ENPEPQ07075 957 aa23.27■■□□□ 1.32
HDDC3-203ENST00000494993 ZNF252P-AS1Q0IIN9 211 aa23.27■■□□□ 1.32
HDDC3-203ENST00000494993 FAM186BQ8IYM0 893 aa23.27■■□□□ 1.32
HDDC3-203ENST00000494993 A0A1W2PQF6 199 aa23.26■■□□□ 1.31
HDDC3-203ENST00000494993 MDM4O15151 490 aa23.26■■□□□ 1.31
HDDC3-203ENST00000494993 AP5Z1O43299 807 aa23.26■■□□□ 1.31
HDDC3-203ENST00000494993 CD58P19256 250 aa23.26■■□□□ 1.31
HDDC3-203ENST00000494993 NDUFA8P51970 172 aa23.26■■□□□ 1.31
HDDC3-203ENST00000494993 KIF11P52732 1056 aa23.26■■□□□ 1.31
HDDC3-203ENST00000494993 DPYDQ12882 1025 aa23.26■■□□□ 1.31
HDDC3-203ENST00000494993 UAP1L1Q3KQV9 507 aa23.26■■□□□ 1.31
HDDC3-203ENST00000494993 PEAR1Q5VY43 1037 aaPredicted RBP23.26■■□□□ 1.31
HDDC3-203ENST00000494993 MMRN2Q9H8L6 949 aa23.26■■□□□ 1.31
HDDC3-203ENST00000494993 CALCOCO1Q9P1Z2 691 aa23.26■■□□□ 1.31
HDDC3-203ENST00000494993 DNMT3LQ9UJW3 386 aa23.26■■□□□ 1.31
HDDC3-203ENST00000494993 PILRBQ9UKJ0 227 aa23.26■■□□□ 1.31
HDDC3-203ENST00000494993 NUDT5Q9UKK9 219 aa23.26■■□□□ 1.31
HDDC3-203ENST00000494993 MAPK8IP1Q9UQF2 711 aa23.26■■□□□ 1.31
HDDC3-203ENST00000494993 PCDH15Q96QU1 1955 aa23.26■■□□□ 1.31
HDDC3-203ENST00000494993 ATXN2Q99700 1313 aaKnown RBP23.26■■□□□ 1.31
HDDC3-203ENST00000494993 FRYQ5TBA9 3013 aa23.25■■□□□ 1.31
HDDC3-203ENST00000494993 CEACAM1P13688 526 aa23.25■■□□□ 1.31
HDDC3-203ENST00000494993 ITPKAP23677 461 aa23.25■■□□□ 1.31
HDDC3-203ENST00000494993 RPL13P26373 211 aaKnown RBP23.25■■□□□ 1.31
HDDC3-203ENST00000494993 HOXD12P35452 270 aa23.25■■□□□ 1.31
HDDC3-203ENST00000494993 PLA2G4AP47712 749 aa23.25■■□□□ 1.31
HDDC3-203ENST00000494993 RPL6Q02878 288 aaKnown RBP23.25■■□□□ 1.31
HDDC3-203ENST00000494993 C10orf120Q5SQS8 335 aa23.25■■□□□ 1.31
HDDC3-203ENST00000494993 SLC23A3Q6PIS1 610 aa23.25■■□□□ 1.31
HDDC3-203ENST00000494993 SLC36A4Q6YBV0 504 aa23.25■■□□□ 1.31
HDDC3-203ENST00000494993 Q6ZNB5 142 aa23.25■■□□□ 1.31
HDDC3-203ENST00000494993 TOGARAM2Q6ZUX3 1019 aa23.25■■□□□ 1.31
HDDC3-203ENST00000494993 CCDC186Q7Z3E2 898 aa23.25■■□□□ 1.31
HDDC3-203ENST00000494993 CHPFQ8IZ52 775 aa23.25■■□□□ 1.31
HDDC3-203ENST00000494993 GUF1Q8N442 669 aaKnown RBP23.25■■□□□ 1.31
HDDC3-203ENST00000494993 ACOX2Q99424 681 aa23.25■■□□□ 1.31
HDDC3-203ENST00000494993 DNAI2Q9GZS0 605 aa23.25■■□□□ 1.31
HDDC3-203ENST00000494993 TMEM8AQ9HCN3 771 aa23.25■■□□□ 1.31
HDDC3-203ENST00000494993 CD248Q9HCU0 757 aa23.25■■□□□ 1.31
HDDC3-203ENST00000494993 NAGPAQ9UK23 515 aa23.25■■□□□ 1.31
HDDC3-203ENST00000494993 PRRT4C9JH25 899 aa23.24■■□□□ 1.31
HDDC3-203ENST00000494993 ENGP17813 658 aa23.24■■□□□ 1.31
HDDC3-203ENST00000494993 PSMC2P35998 433 aaKnown RBP23.24■■□□□ 1.31
HDDC3-203ENST00000494993 DGKGP49619 791 aa23.24■■□□□ 1.31
HDDC3-203ENST00000494993 PSEN1P49768 467 aa23.24■■□□□ 1.31
HDDC3-203ENST00000494993 PPP1R26Q5T8A7 1209 aaPredicted RBP23.24■■□□□ 1.31
HDDC3-203ENST00000494993 SDE2Q6IQ49 451 aa23.24■■□□□ 1.31
HDDC3-203ENST00000494993 SCD5Q86SK9 330 aa23.24■■□□□ 1.31
HDDC3-203ENST00000494993 TADA2BQ86TJ2 420 aa23.24■■□□□ 1.31
HDDC3-203ENST00000494993 ZNF276Q8N554 614 aa23.24■■□□□ 1.31
HDDC3-203ENST00000494993 CCDC150Q8NCX0 1101 aa23.24■■□□□ 1.31
HDDC3-203ENST00000494993 IPO4Q8TEX9 1081 aaKnown RBP23.24■■□□□ 1.31
HDDC3-203ENST00000494993 GABRG3Q99928 467 aa23.24■■□□□ 1.31
HDDC3-203ENST00000494993 DUSP16Q9BY84 665 aa23.24■■□□□ 1.31
HDDC3-203ENST00000494993 ZDHHC9Q9Y397 364 aa23.24■■□□□ 1.31
HDDC3-203ENST00000494993 CACNA1EQ15878 2313 aa23.24■■□□□ 1.31
HDDC3-203ENST00000494993 STC2O76061 302 aa23.23■■□□□ 1.31
HDDC3-203ENST00000494993 CISD3P0C7P0 127 aa23.23■■□□□ 1.31
HDDC3-203ENST00000494993 ADAM9Q13443 819 aa23.23■■□□□ 1.31
HDDC3-203ENST00000494993 KIAA1211LQ6NV74 962 aa23.23■■□□□ 1.31
HDDC3-203ENST00000494993 KRBA2Q6ZNG9 492 aa23.23■■□□□ 1.31
HDDC3-203ENST00000494993 USP3Q9Y6I4 520 aa23.23■■□□□ 1.31
HDDC3-203ENST00000494993 CKAP5Q14008 2032 aa23.22■■□□□ 1.31
HDDC3-203ENST00000494993 IGHV1OR15-9A0A0B4J2B8 117 aa23.22■■□□□ 1.31
HDDC3-203ENST00000494993 ZBTB24O43167 697 aaPredicted RBP23.22■■□□□ 1.31
HDDC3-203ENST00000494993 RALAP11233 206 aa23.22■■□□□ 1.31
HDDC3-203ENST00000494993 NDUFV2P19404 249 aa23.22■■□□□ 1.31
HDDC3-203ENST00000494993 GTF2H1P32780 548 aa23.22■■□□□ 1.31
HDDC3-203ENST00000494993 MAPK8P45983 427 aa23.22■■□□□ 1.31
HDDC3-203ENST00000494993 MCCD1P59942 119 aaPredicted RBP23.22■■□□□ 1.31
HDDC3-203ENST00000494993 FOXC1Q12948 553 aa23.22■■□□□ 1.31
HDDC3-203ENST00000494993 ZCWPW2Q504Y3 356 aa23.22■■□□□ 1.31
HDDC3-203ENST00000494993 ZNF394Q53GI3 561 aa23.22■■□□□ 1.31
HDDC3-203ENST00000494993 KRT39Q6A163 491 aa23.22■■□□□ 1.31
HDDC3-203ENST00000494993 DEFB119Q8N690 84 aa23.22■■□□□ 1.31
HDDC3-203ENST00000494993 DEFB124Q8NES8 71 aa23.22■■□□□ 1.31
HDDC3-203ENST00000494993 CEP76Q8TAP6 659 aa23.22■■□□□ 1.31
HDDC3-203ENST00000494993 BHMTQ93088 406 aa23.22■■□□□ 1.31
HDDC3-203ENST00000494993 PLK2Q9NYY3 685 aa23.22■■□□□ 1.31
HDDC3-203ENST00000494993 CLIC5Q9NZA1 410 aa23.22■■□□□ 1.31
HDDC3-203ENST00000494993 ZNF217O75362 1048 aa23.21■■□□□ 1.31
HDDC3-203ENST00000494993 CFIP05156 583 aa23.21■■□□□ 1.31
HDDC3-203ENST00000494993 ZNF33AQ06730 810 aa23.21■■□□□ 1.31
HDDC3-203ENST00000494993 DUOXA1Q1HG43 343 aa23.21■■□□□ 1.31
HDDC3-203ENST00000494993 SEMA4DQ92854 862 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms