RNA–Protein interactions for RNA: ENST00000494920.1

KDM1A-205, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-205ENST00000494920 OR6B2Q6IFH4 312 aa11.54□□□□□ -0.56
KDM1A-205ENST00000494920 PLEKHA7Q6IQ23 1121 aa11.54□□□□□ -0.56
KDM1A-205ENST00000494920 PPP1R2P3Q6NXS1 205 aa11.54□□□□□ -0.56
KDM1A-205ENST00000494920 VITQ6UXI7 678 aa11.54□□□□□ -0.56
KDM1A-205ENST00000494920 TOGARAM2Q6ZUX3 1019 aa11.54□□□□□ -0.56
KDM1A-205ENST00000494920 MTSS1LQ765P7 747 aa11.54□□□□□ -0.56
KDM1A-205ENST00000494920 KIAA1958Q8N8K9 716 aa11.54□□□□□ -0.56
KDM1A-205ENST00000494920 SPC24Q8NBT2 197 aa11.54□□□□□ -0.56
KDM1A-205ENST00000494920 DQX1Q8TE96 717 aaKnown RBP11.54□□□□□ -0.56
KDM1A-205ENST00000494920 EDEM1Q92611 657 aa11.54□□□□□ -0.56
KDM1A-205ENST00000494920 NXPE3Q969Y0 559 aa11.54□□□□□ -0.56
KDM1A-205ENST00000494920 CDK5RAP1Q96SZ6 601 aaKnown RBP11.54□□□□□ -0.56
KDM1A-205ENST00000494920 KLF16Q9BXK1 252 aaPredicted RBP11.54□□□□□ -0.56
KDM1A-205ENST00000494920 SMOC2Q9H3U7 446 aa11.54□□□□□ -0.56
KDM1A-205ENST00000494920 SLITRK6Q9H5Y7 841 aa11.54□□□□□ -0.56
KDM1A-205ENST00000494920 NHEJ1Q9H9Q4 299 aaPredicted RBP11.54□□□□□ -0.56
KDM1A-205ENST00000494920 KIF9Q9HAQ2 790 aa11.54□□□□□ -0.56
KDM1A-205ENST00000494920 KCNK12Q9HB15 430 aa11.54□□□□□ -0.56
KDM1A-205ENST00000494920 POPDC2Q9HBU9 364 aa11.54□□□□□ -0.56
KDM1A-205ENST00000494920 TRPC7Q9HCX4 862 aa11.54□□□□□ -0.56
KDM1A-205ENST00000494920 TDP1Q9NUW8 608 aa11.54□□□□□ -0.56
KDM1A-205ENST00000494920 SEPT11Q9NVA2 429 aaKnown RBP11.54□□□□□ -0.56
KDM1A-205ENST00000494920 NAALADL1Q9UQQ1 740 aa11.54□□□□□ -0.56
KDM1A-205ENST00000494920 CPQQ9Y646 472 aa11.54□□□□□ -0.56
KDM1A-205ENST00000494920 NUMBLQ9Y6R0 609 aa11.54□□□□□ -0.56
KDM1A-205ENST00000494920 TICRRQ7Z2Z1 1910 aa11.54□□□□□ -0.56
KDM1A-205ENST00000494920 C2CD4BA6NLJ0 364 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 HEPACAM2A8MVW5 462 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 ARNTLO00327 626 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 GJB6O95452 261 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 ABL1P00519 1130 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 FTLP02792 175 aaPredicted RBP11.53□□□□□ -0.56
KDM1A-205ENST00000494920 CKMP06732 381 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 ASGR2P07307 311 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 RALAP11233 206 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 RRM1P23921 792 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 AVPR1AP37288 418 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 SNX16P57768 344 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 GFPT1Q06210 699 aaPredicted RBP11.53□□□□□ -0.56
KDM1A-205ENST00000494920 NNTQ13423 1086 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 GSE1Q14687 1217 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 C10orf120Q5SQS8 335 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 BTBD8Q5XKL5 378 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 ALKBH5Q6P6C2 394 aaKnown RBP11.53□□□□□ -0.56
KDM1A-205ENST00000494920 TAC4Q86UU9 113 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 DEFB106AQ8N104 65 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 MSANTD4Q8NCY6 345 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 ST13P5Q8NFI4 369 aaPredicted RBP11.53□□□□□ -0.56
KDM1A-205ENST00000494920 JOSD2Q8TAC2 188 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 RSAD2Q8WXG1 361 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 FAM149B1Q96BN6 582 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 ASIC4Q96FT7 647 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 SLC39A13Q96H72 371 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 NPY6RQ99463 290 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 DDX23Q9BUQ8 820 aaKnown RBP11.53□□□□□ -0.56
KDM1A-205ENST00000494920 SYNCQ9H7C4 482 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 ZNHIT6Q9NWK9 470 aaKnown RBP11.53□□□□□ -0.56
KDM1A-205ENST00000494920 CALCOCO1Q9P1Z2 691 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 IGSF9Q9P2J2 1179 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 WDR35Q9P2L0 1181 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 LIMD1Q9UGP4 676 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 DNMT3LQ9UJW3 386 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 STRIP2Q9ULQ0 834 aa11.53□□□□□ -0.56
KDM1A-205ENST00000494920 TMCO5BA8MYB1 307 aa11.52□□□□□ -0.57
KDM1A-205ENST00000494920 LEFTY2O00292 366 aa11.52□□□□□ -0.57
KDM1A-205ENST00000494920 IRAK2O43187 625 aa11.52□□□□□ -0.57
KDM1A-205ENST00000494920 ATMINO43313 823 aaPredicted RBP11.52□□□□□ -0.57
KDM1A-205ENST00000494920 GRAP2O75791 330 aa11.52□□□□□ -0.57
KDM1A-205ENST00000494920 MBL2P11226 248 aaPredicted RBP11.52□□□□□ -0.57
KDM1A-205ENST00000494920 TFE3P19532 575 aaPredicted RBP11.52□□□□□ -0.57
KDM1A-205ENST00000494920 ATP5C1P36542 298 aaKnown RBP11.52□□□□□ -0.57
KDM1A-205ENST00000494920 MATKP42679 507 aa11.52□□□□□ -0.57
KDM1A-205ENST00000494920 EFEMP1Q12805 493 aa11.52□□□□□ -0.57
KDM1A-205ENST00000494920 MAMLD1Q13495 774 aa11.52□□□□□ -0.57
KDM1A-205ENST00000494920 TRIP4Q15650 581 aaPredicted RBP11.52□□□□□ -0.57
KDM1A-205ENST00000494920 FAM102AQ5T9C2 384 aaPredicted RBP11.52□□□□□ -0.57
KDM1A-205ENST00000494920 RAD9BQ6WBX8 426 aa11.52□□□□□ -0.57
KDM1A-205ENST00000494920 Q6ZNB5 142 aa11.52□□□□□ -0.57
KDM1A-205ENST00000494920 TADA2BQ86TJ2 420 aa11.52□□□□□ -0.57
KDM1A-205ENST00000494920 VPS36Q86VN1 386 aa11.52□□□□□ -0.57
KDM1A-205ENST00000494920 RNF135Q8IUD6 432 aa11.52□□□□□ -0.57
KDM1A-205ENST00000494920 MFSD6LQ8IWD5 586 aa11.52□□□□□ -0.57
KDM1A-205ENST00000494920 GJD3Q8N144 294 aa11.52□□□□□ -0.57
KDM1A-205ENST00000494920 CELF5Q8N6W0 485 aaKnown RBP11.52□□□□□ -0.57
KDM1A-205ENST00000494920 SH3RF2Q8TEC5 729 aa11.52□□□□□ -0.57
KDM1A-205ENST00000494920 DEPDC1BQ8WUY9 529 aa11.52□□□□□ -0.57
KDM1A-205ENST00000494920 E2F7Q96AV8 911 aa11.52□□□□□ -0.57
KDM1A-205ENST00000494920 PGAP3Q96FM1 320 aaPredicted RBP11.52□□□□□ -0.57
KDM1A-205ENST00000494920 KXD1Q9BQD3 176 aa11.52□□□□□ -0.57
KDM1A-205ENST00000494920 TRIM62Q9BVG3 475 aa11.52□□□□□ -0.57
KDM1A-205ENST00000494920 PACSIN1Q9BY11 444 aa11.52□□□□□ -0.57
KDM1A-205ENST00000494920 ZFP14Q9HCL3 533 aa11.52□□□□□ -0.57
KDM1A-205ENST00000494920 METTL5Q9NRN9 209 aaKnown RBP11.52□□□□□ -0.57
KDM1A-205ENST00000494920 GKN1Q9NS71 199 aa11.52□□□□□ -0.57
KDM1A-205ENST00000494920 OLA1Q9NTK5 396 aaKnown RBP11.52□□□□□ -0.57
KDM1A-205ENST00000494920 SPTLC3Q9NUV7 552 aa11.52□□□□□ -0.57
KDM1A-205ENST00000494920 SMPD4Q9NXE4 827 aa11.52□□□□□ -0.57
KDM1A-205ENST00000494920 MARCH2Q9P0N8 246 aa11.52□□□□□ -0.57
KDM1A-205ENST00000494920 SOWAHDA6NJG2 315 aa11.51□□□□□ -0.57
KDM1A-205ENST00000494920 SIGLEC16A6NMB1 481 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms