RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 NUSAP1Q9BXS6 441 aaKnown RBP24.49■■□□□ 1.51
COL27A1-208ENST00000494780 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.49■■□□□ 1.51
COL27A1-208ENST00000494780 DNMT3LQ9UJW3 386 aa24.49■■□□□ 1.51
COL27A1-208ENST00000494780 A0A1W2PQH9 124 aa24.48■■□□□ 1.51
COL27A1-208ENST00000494780 TYRP14679 529 aa24.48■■□□□ 1.51
COL27A1-208ENST00000494780 GABRG2P18507 467 aa24.48■■□□□ 1.51
COL27A1-208ENST00000494780 CSRP1P21291 193 aaKnown RBP24.48■■□□□ 1.51
COL27A1-208ENST00000494780 PSMC2P35998 433 aaKnown RBP24.48■■□□□ 1.51
COL27A1-208ENST00000494780 PSEN1P49768 467 aa24.48■■□□□ 1.51
COL27A1-208ENST00000494780 SH3PXD2AQ5TCZ1 1133 aa24.48■■□□□ 1.51
COL27A1-208ENST00000494780 TPGS1Q6ZTW0 290 aa24.48■■□□□ 1.51
COL27A1-208ENST00000494780 MIB1Q86YT6 1006 aa24.48■■□□□ 1.51
COL27A1-208ENST00000494780 GUF1Q8N442 669 aaKnown RBP24.48■■□□□ 1.51
COL27A1-208ENST00000494780 ZNF276Q8N554 614 aa24.48■■□□□ 1.51
COL27A1-208ENST00000494780 TMEM8AQ9HCN3 771 aa24.48■■□□□ 1.51
COL27A1-208ENST00000494780 TNRC6BQ9UPQ9 1833 aaKnown RBP24.47■■□□□ 1.51
COL27A1-208ENST00000494780 A0A1W2PQF6 199 aa24.47■■□□□ 1.51
COL27A1-208ENST00000494780 GIPC1O14908 333 aa24.47■■□□□ 1.51
COL27A1-208ENST00000494780 ZBTB24O43167 697 aaPredicted RBP24.47■■□□□ 1.51
COL27A1-208ENST00000494780 AP5Z1O43299 807 aa24.47■■□□□ 1.51
COL27A1-208ENST00000494780 CD58P19256 250 aa24.47■■□□□ 1.51
COL27A1-208ENST00000494780 HOXD12P35452 270 aa24.47■■□□□ 1.51
COL27A1-208ENST00000494780 KIF11P52732 1056 aa24.47■■□□□ 1.51
COL27A1-208ENST00000494780 ADAM9Q13443 819 aa24.47■■□□□ 1.51
COL27A1-208ENST00000494780 C10orf120Q5SQS8 335 aa24.47■■□□□ 1.51
COL27A1-208ENST00000494780 EGFLAMQ63HQ2 1017 aa24.47■■□□□ 1.51
COL27A1-208ENST00000494780 SDE2Q6IQ49 451 aa24.47■■□□□ 1.51
COL27A1-208ENST00000494780 SLC36A4Q6YBV0 504 aa24.47■■□□□ 1.51
COL27A1-208ENST00000494780 CCDC186Q7Z3E2 898 aa24.47■■□□□ 1.51
COL27A1-208ENST00000494780 TADA2BQ86TJ2 420 aa24.47■■□□□ 1.51
COL27A1-208ENST00000494780 DUSP16Q9BY84 665 aa24.47■■□□□ 1.51
COL27A1-208ENST00000494780 TMEM74BQ9NUR3 256 aa24.47■■□□□ 1.51
COL27A1-208ENST00000494780 MAPK8IP1Q9UQF2 711 aa24.47■■□□□ 1.51
COL27A1-208ENST00000494780 CEACAM1P13688 526 aa24.46■■□□□ 1.51
COL27A1-208ENST00000494780 GTF2H1P32780 548 aa24.46■■□□□ 1.51
COL27A1-208ENST00000494780 WASP42768 502 aa24.46■■□□□ 1.51
COL27A1-208ENST00000494780 MCCD1P59942 119 aaPredicted RBP24.46■■□□□ 1.51
COL27A1-208ENST00000494780 ZNF252P-AS1Q0IIN9 211 aa24.46■■□□□ 1.51
COL27A1-208ENST00000494780 PEAR1Q5VY43 1037 aaPredicted RBP24.46■■□□□ 1.51
COL27A1-208ENST00000494780 SLC23A3Q6PIS1 610 aa24.46■■□□□ 1.51
COL27A1-208ENST00000494780 Q6ZNB5 142 aa24.46■■□□□ 1.51
COL27A1-208ENST00000494780 KRBA2Q6ZNG9 492 aa24.46■■□□□ 1.51
COL27A1-208ENST00000494780 CHPFQ8IZ52 775 aa24.46■■□□□ 1.51
COL27A1-208ENST00000494780 FAXDC2Q96IV6 333 aa24.46■■□□□ 1.51
COL27A1-208ENST00000494780 CDK5RAP1Q96SZ6 601 aaKnown RBP24.46■■□□□ 1.51
COL27A1-208ENST00000494780 MMRN2Q9H8L6 949 aa24.46■■□□□ 1.51
COL27A1-208ENST00000494780 CALCOCO1Q9P1Z2 691 aa24.46■■□□□ 1.51
COL27A1-208ENST00000494780 NAGPAQ9UK23 515 aa24.46■■□□□ 1.51
COL27A1-208ENST00000494780 PILRBQ9UKJ0 227 aa24.46■■□□□ 1.51
COL27A1-208ENST00000494780 NUDT5Q9UKK9 219 aa24.46■■□□□ 1.51
COL27A1-208ENST00000494780 USP24Q9UPU5 2620 aa24.46■■□□□ 1.51
COL27A1-208ENST00000494780 MDM4O15151 490 aa24.45■■□□□ 1.5
COL27A1-208ENST00000494780 ZNF217O75362 1048 aa24.45■■□□□ 1.5
COL27A1-208ENST00000494780 RALAP11233 206 aa24.45■■□□□ 1.5
COL27A1-208ENST00000494780 DGKGP49619 791 aa24.45■■□□□ 1.5
COL27A1-208ENST00000494780 RPL6Q02878 288 aaKnown RBP24.45■■□□□ 1.5
COL27A1-208ENST00000494780 UAP1L1Q3KQV9 507 aa24.45■■□□□ 1.5
COL27A1-208ENST00000494780 PPP1R26Q5T8A7 1209 aaPredicted RBP24.45■■□□□ 1.5
COL27A1-208ENST00000494780 KRT39Q6A163 491 aa24.45■■□□□ 1.5
COL27A1-208ENST00000494780 SCD5Q86SK9 330 aa24.45■■□□□ 1.5
COL27A1-208ENST00000494780 TTC39CQ8N584 583 aa24.45■■□□□ 1.5
COL27A1-208ENST00000494780 ACOX2Q99424 681 aa24.45■■□□□ 1.5
COL27A1-208ENST00000494780 GABRG3Q99928 467 aa24.45■■□□□ 1.5
COL27A1-208ENST00000494780 CD248Q9HCU0 757 aa24.45■■□□□ 1.5
COL27A1-208ENST00000494780 CLIC5Q9NZA1 410 aa24.45■■□□□ 1.5
COL27A1-208ENST00000494780 ZNF510Q9Y2H8 683 aa24.45■■□□□ 1.5
COL27A1-208ENST00000494780 ZDHHC9Q9Y397 364 aa24.45■■□□□ 1.5
COL27A1-208ENST00000494780 USP3Q9Y6I4 520 aa24.45■■□□□ 1.5
COL27A1-208ENST00000494780 A0A1W2PQ27 194 aa24.44■■□□□ 1.5
COL27A1-208ENST00000494780 A0A1W2PQ64 194 aa24.44■■□□□ 1.5
COL27A1-208ENST00000494780 A0A1W2PQD8 194 aa24.44■■□□□ 1.5
COL27A1-208ENST00000494780 PRRT4C9JH25 899 aa24.44■■□□□ 1.5
COL27A1-208ENST00000494780 CISD3P0C7P0 127 aa24.44■■□□□ 1.5
COL27A1-208ENST00000494780 ENGP17813 658 aa24.44■■□□□ 1.5
COL27A1-208ENST00000494780 ITPKAP23677 461 aa24.44■■□□□ 1.5
COL27A1-208ENST00000494780 ZCWPW2Q504Y3 356 aa24.44■■□□□ 1.5
COL27A1-208ENST00000494780 TOGARAM2Q6ZUX3 1019 aa24.44■■□□□ 1.5
COL27A1-208ENST00000494780 CEP76Q8TAP6 659 aa24.44■■□□□ 1.5
COL27A1-208ENST00000494780 IPO4Q8TEX9 1081 aaKnown RBP24.44■■□□□ 1.5
COL27A1-208ENST00000494780 CEP295Q9C0D2 2601 aa24.44■■□□□ 1.5
COL27A1-208ENST00000494780 ATXN2Q99700 1313 aaKnown RBP24.43■■□□□ 1.5
COL27A1-208ENST00000494780 GFRA2O00451 464 aa24.43■■□□□ 1.5
COL27A1-208ENST00000494780 STC2O76061 302 aa24.43■■□□□ 1.5
COL27A1-208ENST00000494780 EDRF1Q3B7T1 1238 aa24.43■■□□□ 1.5
COL27A1-208ENST00000494780 HEXIM2Q96MH2 286 aaKnown RBP24.43■■□□□ 1.5
COL27A1-208ENST00000494780 SCAND2PQ9GZW5 306 aaPredicted RBP24.43■■□□□ 1.5
COL27A1-208ENST00000494780 FBXO10Q9UK96 956 aa24.43■■□□□ 1.5
COL27A1-208ENST00000494780 IGHV1OR15-9A0A0B4J2B8 117 aa24.42■■□□□ 1.5
COL27A1-208ENST00000494780 NDUFV2P19404 249 aa24.42■■□□□ 1.5
COL27A1-208ENST00000494780 COG7P83436 770 aa24.42■■□□□ 1.5
COL27A1-208ENST00000494780 DUOXA1Q1HG43 343 aa24.42■■□□□ 1.5
COL27A1-208ENST00000494780 ZNF394Q53GI3 561 aa24.42■■□□□ 1.5
COL27A1-208ENST00000494780 RABEPKQ7Z6M1 372 aa24.42■■□□□ 1.5
COL27A1-208ENST00000494780 UBXN6Q9BZV1 441 aa24.42■■□□□ 1.5
COL27A1-208ENST00000494780 FAM124BQ9H5Z6 455 aaPredicted RBP24.42■■□□□ 1.5
COL27A1-208ENST00000494780 SLC6A14Q9UN76 642 aa24.42■■□□□ 1.5
COL27A1-208ENST00000494780 ATP6V1DQ9Y5K8 247 aa24.42■■□□□ 1.5
COL27A1-208ENST00000494780 LAMA1P25391 3075 aa24.41■■□□□ 1.5
COL27A1-208ENST00000494780 STX10O60499 249 aa24.41■■□□□ 1.5
COL27A1-208ENST00000494780 MAPK8P45983 427 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms