RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 SDCBP2Q9H190 292 aa15.91■□□□□ 0.14
SDF4-207ENST00000494748 SLC38A10Q9HBR0 1119 aa15.91■□□□□ 0.14
SDF4-207ENST00000494748 ZC3H7BQ9UGR2 993 aaKnown RBP15.91■□□□□ 0.14
SDF4-207ENST00000494748 FBXO40Q9UH90 709 aa15.91■□□□□ 0.14
SDF4-207ENST00000494748 POMPQ9Y244 141 aa15.91■□□□□ 0.14
SDF4-207ENST00000494748 PTPRFP10586 1907 aa15.91■□□□□ 0.14
SDF4-207ENST00000494748 OPHN1O60890 802 aa15.91■□□□□ 0.14
SDF4-207ENST00000494748 APOEP02649 317 aa15.91■□□□□ 0.14
SDF4-207ENST00000494748 TFAP2AP05549 437 aa15.91■□□□□ 0.14
SDF4-207ENST00000494748 ITGAXP20702 1163 aa15.91■□□□□ 0.14
SDF4-207ENST00000494748 ASPAP45381 313 aa15.91■□□□□ 0.14
SDF4-207ENST00000494748 CHN2P52757 468 aa15.91■□□□□ 0.14
SDF4-207ENST00000494748 STX3Q13277 289 aa15.91■□□□□ 0.14
SDF4-207ENST00000494748 OGFRL1Q5TC84 451 aaPredicted RBP15.91■□□□□ 0.14
SDF4-207ENST00000494748 TMC7Q7Z402 723 aa15.91■□□□□ 0.14
SDF4-207ENST00000494748 KBTBD6Q86V97 674 aa15.91■□□□□ 0.14
SDF4-207ENST00000494748 KCTD6Q8NC69 237 aa15.91■□□□□ 0.14
SDF4-207ENST00000494748 FAF2Q96CS3 445 aa15.91■□□□□ 0.14
SDF4-207ENST00000494748 SORT1Q99523 831 aa15.91■□□□□ 0.14
SDF4-207ENST00000494748 UBAP1Q9NZ09 502 aa15.91■□□□□ 0.14
SDF4-207ENST00000494748 CLIC5Q9NZA1 410 aa15.91■□□□□ 0.14
SDF4-207ENST00000494748 CLRN2A0PK11 232 aa15.91■□□□□ 0.14
SDF4-207ENST00000494748 PEX1O43933 1283 aa15.91■□□□□ 0.14
SDF4-207ENST00000494748 ERBB2P04626 1255 aa15.91■□□□□ 0.14
SDF4-207ENST00000494748 SLC26A7Q8TE54 656 aa15.91■□□□□ 0.14
SDF4-207ENST00000494748 TFB1MQ8WVM0 346 aaKnown RBP15.91■□□□□ 0.14
SDF4-207ENST00000494748 TMEM143Q96AN5 459 aa15.91■□□□□ 0.14
SDF4-207ENST00000494748 APOL6Q9BWW8 343 aa15.91■□□□□ 0.14
SDF4-207ENST00000494748 MAP3K20Q9NYL2 800 aaKnown RBP15.91■□□□□ 0.14
SDF4-207ENST00000494748 SRCAPQ6ZRS2 3230 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 TRNP1Q6NT89 227 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 DARS2Q6PI48 645 aaKnown RBP15.9■□□□□ 0.14
SDF4-207ENST00000494748 NDUFAF2Q8N183 169 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 MPP5Q8N3R9 675 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.9■□□□□ 0.145e-12■□□□□ 11.3
SDF4-207ENST00000494748 HSPH1Q92598 858 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 NLRP4Q96MN2 994 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 RAB6BQ9NRW1 208 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 C15orf38-AP3S2A0A0A6YYH1 394 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 YDJCA8MPS7 323 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 PROCP04070 461 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 USP4Q13107 963 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 EMC2Q15006 297 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 HADHQ16836 314 aaKnown RBP15.9■□□□□ 0.14
SDF4-207ENST00000494748 SH3PXD2AQ5TCZ1 1133 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 FAXCQ5TGI0 409 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 ARPINQ7Z6K5 226 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 LCA5Q86VQ0 697 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 PIWIL2Q8TC59 973 aaKnown RBP15.9■□□□□ 0.14
SDF4-207ENST00000494748 FAM151AQ8WW52 585 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 NMD3Q96D46 503 aaKnown RBP15.9■□□□□ 0.14
SDF4-207ENST00000494748 MTMR12Q9C0I1 747 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 MIS12Q9H081 205 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 DNAJC16Q9Y2G8 782 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 ARHGAP42A6NI28 874 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 H0YCG3 227 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 STK10O94804 968 aaKnown RBP15.9■□□□□ 0.14
SDF4-207ENST00000494748 PGM3O95394 542 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 ITGA2BP08514 1039 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 RAG1P15918 1043 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 ALOX15P16050 662 aaPredicted RBP15.9■□□□□ 0.14
SDF4-207ENST00000494748 IDH3AP50213 366 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 FOLH1Q04609 750 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 PEX6Q13608 980 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 TIFABQ6ZNK6 161 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 HPS6Q86YV9 775 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 MARVELD2Q8N4S9 558 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 EFCAB3Q8N7B9 438 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 JADE3Q92613 823 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 ATP6V0A1Q93050 837 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 BTBD9Q96Q07 612 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 SIKE1Q9BRV8 207 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 NIF3L1Q9GZT8 377 aa15.9■□□□□ 0.14
SDF4-207ENST00000494748 SCN4AP35499 1836 aa15.89■□□□□ 0.14
SDF4-207ENST00000494748 YY1P25490 414 aa15.89■□□□□ 0.13
SDF4-207ENST00000494748 COPAP53621 1224 aa15.89■□□□□ 0.13
SDF4-207ENST00000494748 EPHB1P54762 984 aa15.89■□□□□ 0.13
SDF4-207ENST00000494748 USP46P62068 366 aa15.89■□□□□ 0.13
SDF4-207ENST00000494748 FASTKD1Q53R41 847 aaKnown RBP15.89■□□□□ 0.13
SDF4-207ENST00000494748 MROH9Q5TGP6 573 aa15.89■□□□□ 0.13
SDF4-207ENST00000494748 VSIG10LQ86VR7 867 aa15.89■□□□□ 0.13
SDF4-207ENST00000494748 MPP4Q96JB8 637 aa15.89■□□□□ 0.13
SDF4-207ENST00000494748 SIGLEC10Q96LC7 697 aa15.89■□□□□ 0.13
SDF4-207ENST00000494748 XYLT2Q9H1B5 865 aa15.89■□□□□ 0.13
SDF4-207ENST00000494748 STN1Q9H668 368 aaKnown RBP15.89■□□□□ 0.13
SDF4-207ENST00000494748 PTTG2Q9NZH5 202 aa15.89■□□□□ 0.13
SDF4-207ENST00000494748 PGAP2Q9UHJ9 254 aa15.89■□□□□ 0.13
SDF4-207ENST00000494748 TCEAL9Q9UHQ7 104 aa15.89■□□□□ 0.13
SDF4-207ENST00000494748 USP18Q9UMW8 372 aa15.89■□□□□ 0.13
SDF4-207ENST00000494748 DENRO43583 198 aaKnown RBP15.89■□□□□ 0.13
SDF4-207ENST00000494748 CD1EP15812 388 aa15.89■□□□□ 0.13
SDF4-207ENST00000494748 IL4RP24394 825 aa15.89■□□□□ 0.13
SDF4-207ENST00000494748 R3HDM1Q15032 1099 aaKnown RBP15.89■□□□□ 0.13
SDF4-207ENST00000494748 MMEL1Q495T6 779 aa15.89■□□□□ 0.13
SDF4-207ENST00000494748 SLFN12LQ6IEE8 588 aa15.89■□□□□ 0.13
SDF4-207ENST00000494748 ABHD15Q6UXT9 468 aa15.89■□□□□ 0.13
SDF4-207ENST00000494748 BRSK2Q8IWQ3 736 aa15.89■□□□□ 0.13
SDF4-207ENST00000494748 LHX5Q9H2C1 402 aa15.89■□□□□ 0.13
SDF4-207ENST00000494748 LDHAP00338 332 aaKnown RBP15.89■□□□□ 0.13
SDF4-207ENST00000494748 OSBPP22059 807 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms