RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 KAT6AQ92794 2004 aa11.63□□□□□ -0.55
CHMP3-209ENST00000494623 CXorf49A8MYA2 514 aaPredicted RBP11.63□□□□□ -0.55
CHMP3-209ENST00000494623 F5H423 210 aaPredicted RBP11.63□□□□□ -0.55
CHMP3-209ENST00000494623 MDM4O15151 490 aa11.63□□□□□ -0.55
CHMP3-209ENST00000494623 DCTN3O75935 186 aa11.63□□□□□ -0.55
CHMP3-209ENST00000494623 SMIM10L2AP0DMW4 78 aa11.63□□□□□ -0.55
CHMP3-209ENST00000494623 SMIM10L2BP0DMW5 78 aa11.63□□□□□ -0.55
CHMP3-209ENST00000494623 CCNB1P14635 433 aa11.63□□□□□ -0.55
CHMP3-209ENST00000494623 SLC8A1P32418 973 aa11.63□□□□□ -0.55
CHMP3-209ENST00000494623 FBXO47Q5MNV8 452 aa11.63□□□□□ -0.55
CHMP3-209ENST00000494623 FYB2Q5VWT5 728 aa11.63□□□□□ -0.55
CHMP3-209ENST00000494623 ARHGAP17Q68EM7 881 aa11.63□□□□□ -0.55
CHMP3-209ENST00000494623 IQSEC1Q6DN90 963 aa11.63□□□□□ -0.55
CHMP3-209ENST00000494623 ZNF449Q6P9G9 518 aa11.63□□□□□ -0.55
CHMP3-209ENST00000494623 CCDC185Q8N715 623 aa11.63□□□□□ -0.55
CHMP3-209ENST00000494623 ANKRD52Q8NB46 1076 aa11.63□□□□□ -0.55
CHMP3-209ENST00000494623 MAGEC3Q8TD91 643 aa11.63□□□□□ -0.55
CHMP3-209ENST00000494623 STK32AQ8WU08 396 aa11.63□□□□□ -0.55
CHMP3-209ENST00000494623 DNAJB3Q8WWF6 145 aa11.63□□□□□ -0.55
CHMP3-209ENST00000494623 TMEM237Q96Q45 408 aa11.63□□□□□ -0.55
CHMP3-209ENST00000494623 VPS11Q9H270 941 aa11.63□□□□□ -0.55
CHMP3-209ENST00000494623 SNX25Q9H3E2 840 aa11.63□□□□□ -0.55
CHMP3-209ENST00000494623 SPON1Q9HCB6 807 aa11.63□□□□□ -0.55
CHMP3-209ENST00000494623 TXLNGQ9NUQ3 528 aa11.63□□□□□ -0.55
CHMP3-209ENST00000494623 L3MBTL1Q9Y468 752 aa11.63□□□□□ -0.55
CHMP3-209ENST00000494623 MAD1L1Q9Y6D9 718 aa11.63□□□□□ -0.55
CHMP3-209ENST00000494623 SMIM28A0A1B0GU29 152 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 KPNA7A9QM74 516 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 AMPD1P23109 780 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 BST2Q10589 180 aaKnown RBP11.62□□□□□ -0.55
CHMP3-209ENST00000494623 RIPK1Q13546 671 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 PLEKHG4Q58EX7 1191 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 ALKAL1Q6UXT8 129 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 SLC26A11Q86WA9 606 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 ZDHHC17Q8IUH5 632 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 PYROXD2Q8N2H3 581 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 NETO2Q8NC67 525 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 RFWD2Q8NHY2 731 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 SLC2A14Q8TDB8 520 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 KBTBD7Q8WVZ9 684 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 RTP4Q96DX8 246 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 CYLDQ9NQC7 956 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 UBQLN1Q9UMX0 589 aaKnown RBP11.62□□□□□ -0.55
CHMP3-209ENST00000494623 AP4E1Q9UPM8 1137 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 PIN4Q9Y237 131 aaKnown RBP11.62□□□□□ -0.55
CHMP3-209ENST00000494623 TTLL3Q9Y4R7 772 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 TRIM49D1C9J1S8 452 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 UGT1A9O60656 530 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 SPAG6O75602 509 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 DARSP14868 501 aaKnown RBP11.62□□□□□ -0.55
CHMP3-209ENST00000494623 GTF2A2P52657 109 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 PREPLQ4J6C6 727 aaPredicted RBP11.62□□□□□ -0.55
CHMP3-209ENST00000494623 TAF1BQ53T94 588 aaPredicted RBP11.62□□□□□ -0.55
CHMP3-209ENST00000494623 TTC39BQ5VTQ0 682 aaPredicted RBP11.62□□□□□ -0.55
CHMP3-209ENST00000494623 KCNT2Q6UVM3 1135 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 NLRP9Q7RTR0 991 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 MTDHQ86UE4 582 aaKnown RBP11.62□□□□□ -0.55
CHMP3-209ENST00000494623 CDKL3Q8IVW4 592 aaPredicted RBP11.62□□□□□ -0.55
CHMP3-209ENST00000494623 AGAP11Q8TF27 550 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 USP6NLQ92738 828 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 KCTD15Q96SI1 283 aaPredicted RBP11.62□□□□□ -0.55
CHMP3-209ENST00000494623 UGT1A7Q9HAW7 530 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 UGT1A10Q9HAW8 530 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 UGT1A8Q9HAW9 530 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 POPDC2Q9HBU9 364 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 CNTN3Q9P232 1028 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 MFHAS1Q9Y4C4 1052 aa11.62□□□□□ -0.55
CHMP3-209ENST00000494623 SYNJ2BP-COX16A0A087WUM0 186 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 A0A0G2JND7 137 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 PIRO00625 290 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 TROVE2P10155 538 aaKnown RBP eCLIP11.61□□□□□ -0.55
CHMP3-209ENST00000494623 ALADP13716 330 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 EZRP15311 586 aaKnown RBP11.61□□□□□ -0.55
CHMP3-209ENST00000494623 BGNP21810 368 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 GRIA1P42261 906 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 SKIV2L2P42285 1042 aaKnown RBP11.61□□□□□ -0.55
CHMP3-209ENST00000494623 PTPN9P43378 593 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 BCAT1P54687 386 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 SLC18A2Q05940 514 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 GRB14Q14449 540 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 HIC1Q14526 733 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 DPYSL2Q16555 572 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 PLEKHH3Q7Z736 793 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 VPS52Q8N1B4 723 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 MPP5Q8N3R9 675 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 TMEM40Q8WWA1 233 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 LENG1Q96BZ8 264 aaPredicted RBP11.61□□□□□ -0.55
CHMP3-209ENST00000494623 APOPT1Q96IL0 206 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 L3MBTL3Q96JM7 780 aaPredicted RBP11.61□□□□□ -0.55
CHMP3-209ENST00000494623 NCAPGQ9BPX3 1015 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 PNPLA8Q9NP80 782 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 SMYD2Q9NRG4 433 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 MTMR10Q9NXD2 777 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 COX16Q9P0S2 106 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 MORF4L1Q9UBU8 362 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 PLXNA1Q9UIW2 1896 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 NRCAMQ92823 1304 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 SLC15A5A6NIM6 579 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 COPEO14579 308 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 CBX6O95503 412 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms