RNA–Protein interactions for RNA: ENST00000494372.1

UFM1-205, Transcript of ubiquitin fold modifier 1, humanhuman

TSL 2

Gene UFM1, Length 777 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-205ENST00000494372 SUMO4Q6EEV6 95 aa6.24□□□□□ -1.41
UFM1-205ENST00000494372 PGBD2Q6P3X8 592 aa6.24□□□□□ -1.41
UFM1-205ENST00000494372 TLDC1Q6P9B6 456 aa6.24□□□□□ -1.41
UFM1-205ENST00000494372 BCDIN3DQ7Z5W3 292 aaKnown RBP6.24□□□□□ -1.41
UFM1-205ENST00000494372 MYLK4Q86YV6 388 aaPredicted RBP6.24□□□□□ -1.41
UFM1-205ENST00000494372 RASGRP3Q8IV61 690 aa6.24□□□□□ -1.41
UFM1-205ENST00000494372 DNAJC10Q8IXB1 793 aa6.24□□□□□ -1.41
UFM1-205ENST00000494372 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.24□□□□□ -1.41
UFM1-205ENST00000494372 PNPLA1Q8N8W4 532 aa6.24□□□□□ -1.41
UFM1-205ENST00000494372 VPS37AQ8NEZ2 397 aa6.24□□□□□ -1.41
UFM1-205ENST00000494372 IPO4Q8TEX9 1081 aaKnown RBP6.24□□□□□ -1.41
UFM1-205ENST00000494372 PMM1Q92871 262 aa6.24□□□□□ -1.41
UFM1-205ENST00000494372 MMS19Q96T76 1030 aa6.24□□□□□ -1.41
UFM1-205ENST00000494372 NUDT22Q9BRQ3 303 aa6.24□□□□□ -1.41
UFM1-205ENST00000494372 HELLSQ9NRZ9 838 aa6.24□□□□□ -1.41
UFM1-205ENST00000494372 F5H423 210 aaPredicted RBP6.23□□□□□ -1.41
UFM1-205ENST00000494372 H7C1Q1 480 aa6.23□□□□□ -1.41
UFM1-205ENST00000494372 PIP5K1BO14986 540 aa6.23□□□□□ -1.41
UFM1-205ENST00000494372 GLP2RO95838 553 aa6.23□□□□□ -1.41
UFM1-205ENST00000494372 DGKQP52824 942 aa6.23□□□□□ -1.41
UFM1-205ENST00000494372 NHLH1Q02575 133 aa6.23□□□□□ -1.41
UFM1-205ENST00000494372 CHAF1AQ13111 956 aaPredicted RBP6.23□□□□□ -1.41
UFM1-205ENST00000494372 KCNJ12Q14500 433 aa6.23□□□□□ -1.41
UFM1-205ENST00000494372 AASDHQ4L235 1098 aaPredicted RBP6.23□□□□□ -1.41
UFM1-205ENST00000494372 GGT6Q6P531 493 aa6.23□□□□□ -1.41
UFM1-205ENST00000494372 CA12O43570 354 aa6.22□□□□□ -1.41
UFM1-205ENST00000494372 NTSR2O95665 410 aa6.22□□□□□ -1.41
UFM1-205ENST00000494372 LDHAP00338 332 aaKnown RBP6.22□□□□□ -1.41
UFM1-205ENST00000494372 MT-CO3P00414 261 aa6.22□□□□□ -1.41
UFM1-205ENST00000494372 RENBPP51606 427 aa6.22□□□□□ -1.41
UFM1-205ENST00000494372 COPB1P53618 953 aaKnown RBP6.22□□□□□ -1.41
UFM1-205ENST00000494372 DNASE1L3Q13609 305 aa6.22□□□□□ -1.41
UFM1-205ENST00000494372 SPARCL1Q14515 664 aa6.22□□□□□ -1.41
UFM1-205ENST00000494372 TMEM196Q5HYL7 178 aa6.22□□□□□ -1.41
UFM1-205ENST00000494372 TMEM63BQ5T3F8 832 aa6.22□□□□□ -1.41
UFM1-205ENST00000494372 P3H2Q8IVL5 708 aa6.22□□□□□ -1.41
UFM1-205ENST00000494372 LINC01465Q8N7H1 131 aa6.22□□□□□ -1.41
UFM1-205ENST00000494372 C12orf76Q8N812 135 aaPredicted RBP6.22□□□□□ -1.41
UFM1-205ENST00000494372 ENAHQ8N8S7 591 aaPredicted RBP6.22□□□□□ -1.41
UFM1-205ENST00000494372 POF1BQ8WVV4 589 aa6.22□□□□□ -1.41
UFM1-205ENST00000494372 ASIC5Q9NY37 505 aa6.22□□□□□ -1.41
UFM1-205ENST00000494372 TCRBV5S1A1TA0A578 114 aa6.21□□□□□ -1.42
UFM1-205ENST00000494372 DHHO43323 396 aa6.21□□□□□ -1.42
UFM1-205ENST00000494372 C1RP00736 705 aa6.21□□□□□ -1.42
UFM1-205ENST00000494372 APEHP13798 732 aaKnown RBP6.21□□□□□ -1.42
UFM1-205ENST00000494372 DRD1P21728 446 aa6.21□□□□□ -1.42
UFM1-205ENST00000494372 TXNL4AP83876 142 aaKnown RBP6.21□□□□□ -1.42
UFM1-205ENST00000494372 CFHR3Q02985 330 aa6.21□□□□□ -1.42
UFM1-205ENST00000494372 TFF2Q03403 129 aa6.21□□□□□ -1.42
UFM1-205ENST00000494372 PUM3Q15397 648 aaKnown RBP6.21□□□□□ -1.42
UFM1-205ENST00000494372 PFKFB4Q16877 469 aa6.21□□□□□ -1.42
UFM1-205ENST00000494372 TRIM71Q2Q1W2 868 aaKnown RBP6.21□□□□□ -1.42
UFM1-205ENST00000494372 C10orf62Q5T681 223 aaPredicted RBP6.21□□□□□ -1.42
UFM1-205ENST00000494372 FAM90A2PQ658T7 463 aa6.21□□□□□ -1.42
UFM1-205ENST00000494372 ZNF788Q6ZQV5 615 aa6.21□□□□□ -1.42
UFM1-205ENST00000494372 CLASRPQ8N2M8 674 aaKnown RBP6.21□□□□□ -1.42
UFM1-205ENST00000494372 FAM71DQ8N9W8 422 aa6.21□□□□□ -1.42
UFM1-205ENST00000494372 EDC3Q96F86 508 aaKnown RBP6.21□□□□□ -1.42
UFM1-205ENST00000494372 CRAMP1Q96RY5 1269 aa6.21□□□□□ -1.42
UFM1-205ENST00000494372 EPS8L2Q9H6S3 715 aa6.21□□□□□ -1.42
UFM1-205ENST00000494372 OBP2BQ9NPH6 170 aa6.21□□□□□ -1.42
UFM1-205ENST00000494372 RXFP3Q9NSD7 469 aa6.21□□□□□ -1.42
UFM1-205ENST00000494372 GAR1Q9NY12 217 aaKnown RBP6.21□□□□□ -1.42
UFM1-205ENST00000494372 KAT6AQ92794 2004 aa6.21□□□□□ -1.42
UFM1-205ENST00000494372 PNMA6EA0A0J9YXQ4 647 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 AQP12BA6NM10 295 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 LGALS16A8MUM7 142 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 J3KTA2 159 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 SMIM22K7EJ46 135 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 PCDH17O14917 1159 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 NPC1O15118 1278 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 PPFIA2O75334 1257 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 SKAP2O75563 359 aaPredicted RBP6.2□□□□□ -1.42
UFM1-205ENST00000494372 NHLRC4P0CG21 123 aaPredicted RBP6.2□□□□□ -1.42
UFM1-205ENST00000494372 NPPBP16860 134 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 ZNF37AP17032 561 aaPredicted RBP6.2□□□□□ -1.42
UFM1-205ENST00000494372 PROK1P58294 105 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 GPC5P78333 572 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 ICA1Q05084 483 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 CCDC15Q0P6D6 951 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 PTK2BQ14289 1009 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 KRT72Q14CN4 511 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 PROSER3Q2NL68 480 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 C4orf46Q504U0 113 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 PRAMEF17Q5VTA0 474 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 FAM71BQ8TC56 605 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 ADAMTS18Q8TE60 1221 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 HASPINQ8TF76 798 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 OVCA2Q8WZ82 227 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 PRR11Q96HE9 360 aaPredicted RBP6.2□□□□□ -1.42
UFM1-205ENST00000494372 FYTTD1Q96QD9 318 aaKnown RBP6.2□□□□□ -1.42
UFM1-205ENST00000494372 PRPF18Q99633 342 aaKnown RBP6.2□□□□□ -1.42
UFM1-205ENST00000494372 CINPQ9BW66 212 aaPredicted RBP6.2□□□□□ -1.42
UFM1-205ENST00000494372 SAP30LQ9HAJ7 183 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 USP29Q9HBJ7 922 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 FSCN3Q9NQT6 498 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 VPS45Q9NRW7 570 aa6.2□□□□□ -1.42
UFM1-205ENST00000494372 BTBD19C9JJ37 291 aa6.19□□□□□ -1.42
UFM1-205ENST00000494372 POC1B-GALNT4F8VUJ3 575 aa6.19□□□□□ -1.42
UFM1-205ENST00000494372 H3BNC9 293 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms