RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 DEUP1Q05D60 604 aa4.43□□□□□ -1.7
CD46-217ENST00000493796 HLTFQ14527 1009 aaKnown RBP eCLIP4.43□□□□□ -1.7
CD46-217ENST00000493796 SUPT20HL1Q3ZLR7 823 aa4.43□□□□□ -1.7
CD46-217ENST00000493796 TMEM63BQ5T3F8 832 aa4.43□□□□□ -1.7
CD46-217ENST00000493796 C1QL2Q7Z5L3 287 aa4.43□□□□□ -1.7
CD46-217ENST00000493796 LIX1LQ8IVB5 337 aa4.43□□□□□ -1.7
CD46-217ENST00000493796 PNPLA1Q8N8W4 532 aa4.43□□□□□ -1.7
CD46-217ENST00000493796 NGDNQ8NEJ9 315 aaKnown RBP4.43□□□□□ -1.7
CD46-217ENST00000493796 MAFAQ8NHW3 353 aaPredicted RBP4.43□□□□□ -1.7
CD46-217ENST00000493796 MBD3L2Q8NHZ7 208 aaPredicted RBP4.43□□□□□ -1.7
CD46-217ENST00000493796 ZC3H10Q96K80 434 aaKnown RBP4.43□□□□□ -1.7
CD46-217ENST00000493796 ZNF778Q96MU6 729 aa4.43□□□□□ -1.7
CD46-217ENST00000493796 COLEC11Q9BWP8 271 aa4.43□□□□□ -1.7
CD46-217ENST00000493796 SLC25A32Q9H2D1 315 aa4.43□□□□□ -1.7
CD46-217ENST00000493796 NRIP3Q9NQ35 241 aa4.43□□□□□ -1.7
CD46-217ENST00000493796 PDGFCQ9NRA1 345 aa4.43□□□□□ -1.7
CD46-217ENST00000493796 ASAP1Q9ULH1 1129 aa4.43□□□□□ -1.7
CD46-217ENST00000493796 PRG4Q92954 1404 aaPredicted RBP4.43□□□□□ -1.7
CD46-217ENST00000493796 IQGAP2Q13576 1575 aa4.43□□□□□ -1.7
CD46-217ENST00000493796 WDR17Q8IZU2 1322 aa4.43□□□□□ -1.7
CD46-217ENST00000493796 MAGI3Q5TCQ9 1506 aa4.42□□□□□ -1.7
CD46-217ENST00000493796 SMIM35A0A1B0GVV1 85 aa4.42□□□□□ -1.7
CD46-217ENST00000493796 TMEM232C9JQI7 657 aa4.42□□□□□ -1.7
CD46-217ENST00000493796 PMM2O15305 246 aa4.42□□□□□ -1.7
CD46-217ENST00000493796 ATF7P17544 494 aaPredicted RBP4.42□□□□□ -1.7
CD46-217ENST00000493796 FGFR2P21802 821 aa4.42□□□□□ -1.7
CD46-217ENST00000493796 SFPQP23246 707 aaKnown RBP eCLIP4.42□□□□□ -1.7
CD46-217ENST00000493796 ADRA1DP25100 572 aa4.42□□□□□ -1.7
CD46-217ENST00000493796 ATICP31939 592 aa4.42□□□□□ -1.7
CD46-217ENST00000493796 CFHR3Q02985 330 aa4.42□□□□□ -1.7
CD46-217ENST00000493796 IFIT5Q13325 482 aaKnown RBP4.42□□□□□ -1.7
CD46-217ENST00000493796 FHL3Q13643 280 aa4.42□□□□□ -1.7
CD46-217ENST00000493796 LARS2Q15031 903 aaKnown RBP4.42□□□□□ -1.7
CD46-217ENST00000493796 FHOD3Q2V2M9 1422 aa4.42□□□□□ -1.7
CD46-217ENST00000493796 MORN5Q5VZ52 161 aa4.42□□□□□ -1.7
CD46-217ENST00000493796 MIS18BP1Q6P0N0 1132 aa4.42□□□□□ -1.7
CD46-217ENST00000493796 TMEM65Q6PI78 240 aa4.42□□□□□ -1.7
CD46-217ENST00000493796 ZNF813Q6ZN06 617 aa4.42□□□□□ -1.7
CD46-217ENST00000493796 CCAR1Q8IX12 1150 aaKnown RBP4.42□□□□□ -1.7
CD46-217ENST00000493796 CCDC33Q8N5R6 958 aa4.42□□□□□ -1.7
CD46-217ENST00000493796 C12orf76Q8N812 135 aaPredicted RBP4.42□□□□□ -1.7
CD46-217ENST00000493796 PJA1Q8NG27 643 aa4.42□□□□□ -1.7
CD46-217ENST00000493796 ZNF398Q8TD17 642 aa4.42□□□□□ -1.7
CD46-217ENST00000493796 PNISRQ8TF01 805 aaKnown RBP4.42□□□□□ -1.7
CD46-217ENST00000493796 SMG7Q92540 1137 aaKnown RBP4.42□□□□□ -1.7
CD46-217ENST00000493796 EDC3Q96F86 508 aaKnown RBP4.42□□□□□ -1.7
CD46-217ENST00000493796 TBCBQ99426 244 aa4.42□□□□□ -1.7
CD46-217ENST00000493796 MYO1AQ9UBC5 1043 aa4.42□□□□□ -1.7
CD46-217ENST00000493796 RNF7Q9UBF6 113 aa4.42□□□□□ -1.7
CD46-217ENST00000493796 BTBD3Q9Y2F9 522 aa4.42□□□□□ -1.7
CD46-217ENST00000493796 KIAA0556O60303 1618 aa4.42□□□□□ -1.7
CD46-217ENST00000493796 PLB1Q6P1J6 1458 aa4.42□□□□□ -1.7
CD46-217ENST00000493796 CYP2D7A0A087X1C5 515 aa4.41□□□□□ -1.7
CD46-217ENST00000493796 A0A1W2PPC4 97 aa4.41□□□□□ -1.7
CD46-217ENST00000493796 KCNQ3O43525 872 aa4.41□□□□□ -1.7
CD46-217ENST00000493796 WDR47O94967 919 aa4.41□□□□□ -1.7
CD46-217ENST00000493796 TMEM225BP0DP42 221 aa4.41□□□□□ -1.7
CD46-217ENST00000493796 MYL4P12829 197 aa4.41□□□□□ -1.7
CD46-217ENST00000493796 GNALP38405 381 aa4.41□□□□□ -1.7
CD46-217ENST00000493796 ARHGAP25P42331 645 aa4.41□□□□□ -1.7
CD46-217ENST00000493796 STT3AP46977 705 aa4.41□□□□□ -1.7
CD46-217ENST00000493796 MTAPQ13126 283 aa4.41□□□□□ -1.7
CD46-217ENST00000493796 DAZAP2Q15038 168 aaPredicted RBP4.41□□□□□ -1.7
CD46-217ENST00000493796 AWAT1Q58HT5 328 aa4.41□□□□□ -1.7
CD46-217ENST00000493796 SLC2A7Q6PXP3 512 aa4.41□□□□□ -1.7
CD46-217ENST00000493796 CRTC1Q6UUV9 634 aa4.41□□□□□ -1.7
CD46-217ENST00000493796 DCDC5Q6ZRR9 648 aa4.41□□□□□ -1.7
CD46-217ENST00000493796 BEND5Q7L4P6 421 aa4.41□□□□□ -1.7
CD46-217ENST00000493796 FSTL5Q8N475 847 aaPredicted RBP4.41□□□□□ -1.7
CD46-217ENST00000493796 SUN3Q8TAQ9 357 aa4.41□□□□□ -1.7
CD46-217ENST00000493796 LRRC46Q96FV0 321 aa4.41□□□□□ -1.7
CD46-217ENST00000493796 KAZALD1Q96I82 304 aa4.41□□□□□ -1.7
CD46-217ENST00000493796 VPS50Q96JG6 964 aa4.41□□□□□ -1.7
CD46-217ENST00000493796 EFHD1Q9BUP0 239 aa4.41□□□□□ -1.7
CD46-217ENST00000493796 NAA15Q9BXJ9 866 aaKnown RBP4.41□□□□□ -1.7
CD46-217ENST00000493796 PRSS22Q9GZN4 317 aa4.41□□□□□ -1.7
CD46-217ENST00000493796 ZBTB26Q9HCK0 441 aa4.41□□□□□ -1.7
CD46-217ENST00000493796 GJB4Q9NTQ9 266 aa4.41□□□□□ -1.7
CD46-217ENST00000493796 GEMIN8Q9NWZ8 242 aaKnown RBP4.41□□□□□ -1.7
CD46-217ENST00000493796 SCAF8Q9UPN6 1271 aaKnown RBP4.41□□□□□ -1.7
CD46-217ENST00000493796 ABCC2Q92887 1545 aa4.41□□□□□ -1.7
CD46-217ENST00000493796 ABCA8O94911 1581 aa4.4□□□□□ -1.7
CD46-217ENST00000493796 EEA1Q15075 1411 aa4.4□□□□□ -1.7
CD46-217ENST00000493796 APOL1O14791 398 aa4.4□□□□□ -1.71
CD46-217ENST00000493796 BCAR3O75815 825 aa4.4□□□□□ -1.71
CD46-217ENST00000493796 ARP10275 920 aa4.4□□□□□ -1.71
CD46-217ENST00000493796 GPC5P78333 572 aa4.4□□□□□ -1.71
CD46-217ENST00000493796 TXNL4AP83876 142 aaKnown RBP4.4□□□□□ -1.71
CD46-217ENST00000493796 KRTAP1-1Q07627 177 aa4.4□□□□□ -1.71
CD46-217ENST00000493796 KLF9Q13886 244 aaPredicted RBP4.4□□□□□ -1.71
CD46-217ENST00000493796 KCNB1Q14721 858 aa4.4□□□□□ -1.71
CD46-217ENST00000493796 ACOX1Q15067 660 aa4.4□□□□□ -1.71
CD46-217ENST00000493796 MEX3CQ5U5Q3 659 aaKnown RBP4.4□□□□□ -1.71
CD46-217ENST00000493796 ABLIM2Q6H8Q1 611 aa4.4□□□□□ -1.71
CD46-217ENST00000493796 GRHL2Q6ISB3 625 aa4.4□□□□□ -1.71
CD46-217ENST00000493796 ZNF425Q6IV72 752 aa4.4□□□□□ -1.71
CD46-217ENST00000493796 USP17L6PQ6QN14 398 aa4.4□□□□□ -1.71
CD46-217ENST00000493796 VSTM1Q6UX27 236 aa4.4□□□□□ -1.71
CD46-217ENST00000493796 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.4□□□□□ -1.71
CD46-217ENST00000493796 RPL36ALQ969Q0 106 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms