RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 PARP6Q2NL67 630 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 XKR4Q5GH76 650 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 SH3PXD2AQ5TCZ1 1133 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 CGB2Q6NT52 195 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 CHADLQ6NUI6 762 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 NPNTQ6UXI9 565 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 ASRGL1Q7L266 308 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 AGGF1Q8N302 714 aaeCLIP10.01□□□□□ -0.81
NPHP3-209ENST00000493732 TOP6BLQ8N6T0 577 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 TCP10LQ8TDR4 215 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 KHSRPQ92945 711 aaKnown RBP eCLIP10.01□□□□□ -0.814e-6■■■■□ 22.3
NPHP3-209ENST00000493732 MRRFQ96E11 262 aaKnown RBP10.01□□□□□ -0.81
NPHP3-209ENST00000493732 ZMAT2Q96NC0 199 aaKnown RBP10.01□□□□□ -0.81
NPHP3-209ENST00000493732 C11orf84Q9BUA3 381 aaPredicted RBP10.01□□□□□ -0.81
NPHP3-209ENST00000493732 KATNAL1Q9BW62 490 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 MANSC1Q9H8J5 431 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 C10orf88Q9H8K7 445 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 KIF9Q9HAQ2 790 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 SAR1AQ9NR31 198 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 FAM49BQ9NUQ9 324 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 ZC3H7BQ9UGR2 993 aaKnown RBP10.01□□□□□ -0.81
NPHP3-209ENST00000493732 KLF11O14901 512 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 XPO1O14980 1071 aaKnown RBP10.01□□□□□ -0.81
NPHP3-209ENST00000493732 BANF1O75531 89 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 RECQL4O94761 1208 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 PRKCHP24723 683 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 CPT1AP50416 773 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 AIF1P55008 147 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 KBTBD12Q3ZCT8 623 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 PPP6R3Q5H9R7 873 aaPredicted RBP10.01□□□□□ -0.81
NPHP3-209ENST00000493732 HEATR6Q6AI08 1181 aaKnown RBP10.01□□□□□ -0.81
NPHP3-209ENST00000493732 LIMS2Q7Z4I7 341 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 C7orf31Q8N865 590 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 TMEM237Q96Q45 408 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 NAT9Q9BTE0 207 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 TRIM55Q9BYV6 548 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 FAM49AQ9H0Q0 323 aaPredicted RBP10.01□□□□□ -0.81
NPHP3-209ENST00000493732 MKS1Q9NXB0 559 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 TUBGCP4Q9UGJ1 667 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 AP4E1Q9UPM8 1137 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 GINS2Q9Y248 185 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 Q9Y3F1 56 aa10.01□□□□□ -0.81
NPHP3-209ENST00000493732 SF3B1O75533 1304 aaKnown RBP eCLIP10.01□□□□□ -0.81
NPHP3-209ENST00000493732 SCN4AP35499 1836 aa10□□□□□ -0.81
NPHP3-209ENST00000493732 SMIM28A0A1B0GU29 152 aa10□□□□□ -0.81
NPHP3-209ENST00000493732 PIK3R2O00459 728 aa10□□□□□ -0.81
NPHP3-209ENST00000493732 COPEO14579 308 aa10□□□□□ -0.81
NPHP3-209ENST00000493732 DYNC1LI2O43237 492 aaPredicted RBP10□□□□□ -0.81
NPHP3-209ENST00000493732 APRTP07741 180 aa10□□□□□ -0.81
NPHP3-209ENST00000493732 DHRS4L1P0CG22 281 aa10□□□□□ -0.81
NPHP3-209ENST00000493732 NEFHP12036 1026 aa10□□□□□ -0.81
NPHP3-209ENST00000493732 WARSP23381 471 aaKnown RBP10□□□□□ -0.81
NPHP3-209ENST00000493732 MATKP42679 507 aa10□□□□□ -0.81
NPHP3-209ENST00000493732 PSMC4P43686 418 aa10□□□□□ -0.81
NPHP3-209ENST00000493732 CRYBB1P53674 252 aaPredicted RBP10□□□□□ -0.81
NPHP3-209ENST00000493732 YWHAZP63104 245 aaKnown RBP10□□□□□ -0.81
NPHP3-209ENST00000493732 GAD2Q05329 585 aa10□□□□□ -0.81
NPHP3-209ENST00000493732 DBN1Q16643 649 aa10□□□□□ -0.81
NPHP3-209ENST00000493732 PDZD4Q76G19 769 aaPredicted RBP10□□□□□ -0.81
NPHP3-209ENST00000493732 RAB3IL1Q8TBN0 382 aa10□□□□□ -0.81
NPHP3-209ENST00000493732 BRI3BPQ8WY22 251 aa10□□□□□ -0.81
NPHP3-209ENST00000493732 PIWIL1Q96J94 861 aaKnown RBP10□□□□□ -0.81
NPHP3-209ENST00000493732 RMDN2Q96LZ7 410 aa10□□□□□ -0.81
NPHP3-209ENST00000493732 QKIQ96PU8 341 aaKnown RBP eCLIP10□□□□□ -0.81
NPHP3-209ENST00000493732 OSMRQ99650 979 aa10□□□□□ -0.81
NPHP3-209ENST00000493732 HNRNPABQ99729 332 aaKnown RBP10□□□□□ -0.81
NPHP3-209ENST00000493732 WDR83Q9BRX9 315 aaKnown RBP10□□□□□ -0.81
NPHP3-209ENST00000493732 LRMDAQ9H2I8 198 aa10□□□□□ -0.81
NPHP3-209ENST00000493732 DHX35Q9H5Z1 703 aaKnown RBP10□□□□□ -0.81
NPHP3-209ENST00000493732 NOD2Q9HC29 1040 aa10□□□□□ -0.81
NPHP3-209ENST00000493732 STAP1Q9ULZ2 295 aa10□□□□□ -0.81
NPHP3-209ENST00000493732 RPL26L1Q9UNX3 145 aaKnown RBP10□□□□□ -0.81
NPHP3-209ENST00000493732 MTO1Q9Y2Z2 717 aaKnown RBP10□□□□□ -0.81
NPHP3-209ENST00000493732 RAD54BQ9Y620 910 aa10□□□□□ -0.81
NPHP3-209ENST00000493732 ZNF236Q9UL36 1845 aa9.99□□□□□ -0.81
NPHP3-209ENST00000493732 H3BRJ5 948 aa9.99□□□□□ -0.81
NPHP3-209ENST00000493732 IGF2BP3O00425 579 aaKnown RBP eCLIP9.99□□□□□ -0.81
NPHP3-209ENST00000493732 WFS1O76024 890 aa9.99□□□□□ -0.81
NPHP3-209ENST00000493732 ITGBL1O95965 494 aaPredicted RBP9.99□□□□□ -0.81
NPHP3-209ENST00000493732 APOEP02649 317 aa9.99□□□□□ -0.81
NPHP3-209ENST00000493732 CCND1P24385 295 aa9.99□□□□□ -0.81
NPHP3-209ENST00000493732 ADRA1DP25100 572 aa9.99□□□□□ -0.81
NPHP3-209ENST00000493732 NEK3P51956 506 aa9.99□□□□□ -0.81
NPHP3-209ENST00000493732 SF3A3Q12874 501 aaKnown RBP eCLIP9.99□□□□□ -0.81
NPHP3-209ENST00000493732 NAB1Q13506 487 aa9.99□□□□□ -0.81
NPHP3-209ENST00000493732 SEMA5AQ13591 1074 aa9.99□□□□□ -0.81
NPHP3-209ENST00000493732 MFSD10Q14728 455 aa9.99□□□□□ -0.81
NPHP3-209ENST00000493732 SLC25A52Q3SY17 297 aa9.99□□□□□ -0.81
NPHP3-209ENST00000493732 WLSQ5T9L3 541 aa9.99□□□□□ -0.81
NPHP3-209ENST00000493732 OTOAQ7RTW8 1153 aa9.99□□□□□ -0.81
NPHP3-209ENST00000493732 CTAGE3PQ8IX95 158 aa9.99□□□□□ -0.81
NPHP3-209ENST00000493732 GSDMBQ8TAX9 411 aa9.99□□□□□ -0.81
NPHP3-209ENST00000493732 TFB1MQ8WVM0 346 aaKnown RBP9.99□□□□□ -0.81
NPHP3-209ENST00000493732 C10orf82Q8WW14 230 aa9.99□□□□□ -0.81
NPHP3-209ENST00000493732 KCTD13Q8WZ19 329 aa9.99□□□□□ -0.81
NPHP3-209ENST00000493732 ERP27Q96DN0 273 aa9.99□□□□□ -0.81
NPHP3-209ENST00000493732 SLC9A7Q96T83 725 aa9.99□□□□□ -0.81
NPHP3-209ENST00000493732 EBNA1BP2Q99848 306 aaKnown RBP9.99□□□□□ -0.81
NPHP3-209ENST00000493732 EIF2AQ9BY44 585 aaKnown RBP9.99□□□□□ -0.81
NPHP3-209ENST00000493732 ETNK1Q9HBU6 452 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms