RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 POPDC2Q9HBU9 364 aa12.67□□□□□ -0.38
RHBDF1-211ENST00000493647 METTL5Q9NRN9 209 aaKnown RBP12.67□□□□□ -0.38
RHBDF1-211ENST00000493647 GKN1Q9NS71 199 aa12.67□□□□□ -0.38
RHBDF1-211ENST00000493647 SMPD4Q9NXE4 827 aa12.67□□□□□ -0.38
RHBDF1-211ENST00000493647 PRKAG3Q9UGI9 489 aa12.67□□□□□ -0.38
RHBDF1-211ENST00000493647 STRIP2Q9ULQ0 834 aa12.67□□□□□ -0.38
RHBDF1-211ENST00000493647 ARHGAP26Q9UNA1 814 aa12.67□□□□□ -0.38
RHBDF1-211ENST00000493647 NR2E1Q9Y466 385 aa12.67□□□□□ -0.38
RHBDF1-211ENST00000493647 CPQQ9Y646 472 aa12.67□□□□□ -0.38
RHBDF1-211ENST00000493647 ZFP37Q9Y6Q3 630 aaPredicted RBP12.67□□□□□ -0.38
RHBDF1-211ENST00000493647 MYO16Q9Y6X6 1858 aa12.67□□□□□ -0.38
RHBDF1-211ENST00000493647 ANAPC1Q9H1A4 1944 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 GOLGA6L6A8MZA4 724 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 MSI1O43347 362 aaKnown RBP12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 HSF2BPO75031 334 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 CKMP06732 381 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 NCAM1P13591 858 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 TFE3P19532 575 aaPredicted RBP12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 ABCB4P21439 1286 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 ATP5C1P36542 298 aaKnown RBP12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 AVPR1AP37288 418 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 GALCP54803 685 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 RNASE9P60153 205 aaKnown RBP12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 USP4Q13107 963 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 PLEKHA7Q6IQ23 1121 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 PPP1R2P3Q6NXS1 205 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 KLHDC10Q6PID8 442 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 TAC4Q86UU9 113 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 TMTC1Q8IUR5 882 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 EMC1Q8N766 993 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 SH3RF2Q8TEC5 729 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 ZNF653Q96CK0 615 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 NECAB3Q96P71 396 aaPredicted RBP12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 THAP2Q9H0W7 228 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 CD320Q9NPF0 282 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 CALCOCO1Q9P1Z2 691 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 WDR35Q9P2L0 1181 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 CNOT8Q9UFF9 292 aaKnown RBP12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 LIMD1Q9UGP4 676 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 SFMBT1Q9UHJ3 866 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 ZMYM5Q9UJ78 669 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 RASAL2Q9UJF2 1139 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 DNMT3LQ9UJW3 386 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 REXO2Q9Y3B8 237 aaKnown RBP12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 NUMBLQ9Y6R0 609 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 XIRP2A4UGR9 3374 aa12.66□□□□□ -0.38
RHBDF1-211ENST00000493647 SIGLEC16A6NMB1 481 aa12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 HEPACAM2A8MVW5 462 aa12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 LEFTY2O00292 366 aa12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 GREM1O60565 184 aa12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 LCA5LO95447 670 aa12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 CYP1A2P05177 515 aa12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 ASGR2P07307 311 aa12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 RFC1P35251 1148 aaPredicted RBP12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 RPL7AP62424 266 aaKnown RBP12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 MAMLD1Q13495 774 aa12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 ZNF77Q15935 545 aa12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 RAB6CQ53S08 254 aa12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 DCAF6Q58WW2 860 aa12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 DNAJC24Q6P3W2 148 aa12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 VITQ6UXI7 678 aa12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 RSRC2Q7L4I2 434 aaKnown RBP12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 MIB1Q86YT6 1006 aa12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 CCDC170Q8IYT3 715 aa12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 PLCD3Q8N3E9 789 aa12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 ADAM32Q8TC27 787 aa12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 RNF139Q8WU17 664 aa12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 GOLGA1Q92805 767 aa12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 CDK5RAP1Q96SZ6 601 aaKnown RBP12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 DDX23Q9BUQ8 820 aaKnown RBP12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 TRIM7Q9C029 511 aa12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 RAB6CQ9H0N0 254 aa12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 SMOC2Q9H3U7 446 aa12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 OLA1Q9NTK5 396 aaKnown RBP12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 TDP1Q9NUW8 608 aa12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 MARCH2Q9P0N8 246 aa12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 MYO1AQ9UBC5 1043 aa12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 EPN1Q9Y6I3 576 aaPredicted RBP12.65□□□□□ -0.38
RHBDF1-211ENST00000493647 DENND4CQ5VZ89 1909 aa12.64□□□□□ -0.39
RHBDF1-211ENST00000493647 SLC12A8A0AV02 714 aa12.64□□□□□ -0.39
RHBDF1-211ENST00000493647 ANKRD62A6NC57 917 aa12.64□□□□□ -0.39
RHBDF1-211ENST00000493647 C2CD4BA6NLJ0 364 aa12.64□□□□□ -0.39
RHBDF1-211ENST00000493647 EIF3CLB5ME19 914 aaKnown RBP12.64□□□□□ -0.39
RHBDF1-211ENST00000493647 SCAMP3O14828 347 aaKnown RBP12.64□□□□□ -0.39
RHBDF1-211ENST00000493647 ECI2O75521 394 aa12.64□□□□□ -0.39
RHBDF1-211ENST00000493647 NDUFA10O95299 355 aa12.64□□□□□ -0.39
RHBDF1-211ENST00000493647 IGLV3-25P01717 112 aa12.64□□□□□ -0.39
RHBDF1-211ENST00000493647 MYBL1P10243 752 aa12.64□□□□□ -0.39
RHBDF1-211ENST00000493647 IRF1P10914 325 aa12.64□□□□□ -0.39
RHBDF1-211ENST00000493647 KRT3P12035 628 aa12.64□□□□□ -0.39
RHBDF1-211ENST00000493647 TCF3P15923 654 aa12.64□□□□□ -0.39
RHBDF1-211ENST00000493647 NOS2P35228 1153 aa12.64□□□□□ -0.39
RHBDF1-211ENST00000493647 MATKP42679 507 aa12.64□□□□□ -0.39
RHBDF1-211ENST00000493647 CCZ1BP86790 482 aa12.64□□□□□ -0.39
RHBDF1-211ENST00000493647 CCZ1P86791 482 aaPredicted RBP12.64□□□□□ -0.39
RHBDF1-211ENST00000493647 OGDHQ02218 1023 aa12.64□□□□□ -0.39
RHBDF1-211ENST00000493647 EIF4EBP2Q13542 120 aaPredicted RBP12.64□□□□□ -0.39
RHBDF1-211ENST00000493647 TJAP1Q5JTD0 557 aa12.64□□□□□ -0.39
RHBDF1-211ENST00000493647 ARCQ7LC44 396 aa12.64□□□□□ -0.39
RHBDF1-211ENST00000493647 BNIPLQ7Z465 357 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms