RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 CEBPBP17676 345 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 GPD1P21695 349 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 SDC4P31431 198 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 AVPR1AP37288 418 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 ZNF143P52747 638 aaPredicted RBP12.07□□□□□ -0.48
LSM2-214ENST00000493387 SLC7A9P82251 487 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 COG7P83436 770 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 CYP4F8P98187 520 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 MTA1Q13330 715 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 NNTQ13423 1086 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 ACAP1Q15027 740 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 IFI16Q16666 785 aaKnown RBP12.07□□□□□ -0.48
LSM2-214ENST00000493387 SLC25A52Q3SY17 297 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 TXNDC8Q6A555 127 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 ZNF662Q6ZS27 426 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 DDX42Q86XP3 938 aaKnown RBP eCLIP12.07□□□□□ -0.48
LSM2-214ENST00000493387 DNAAF5Q86Y56 855 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 CMTM8Q8IZV2 173 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 MAB21L3Q8N8X9 362 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 ZNF564Q8TBZ8 553 aaPredicted RBP12.07□□□□□ -0.48
LSM2-214ENST00000493387 RXFP2Q8WXD0 754 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 EDEM1Q92611 657 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 FGF13Q92913 245 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 ACSF2Q96CM8 615 aaPredicted RBP12.07□□□□□ -0.48
LSM2-214ENST00000493387 PIWIL1Q96J94 861 aaKnown RBP12.07□□□□□ -0.48
LSM2-214ENST00000493387 SERPINB11Q96P15 392 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 MCEEQ96PE7 176 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 DESI2Q9BSY9 194 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 SLC46A2Q9BY10 475 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 KCNF1Q9H3M0 494 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 SMOC2Q9H3U7 446 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 TRPC7Q9HCX4 862 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 BRWD1Q9NSI6 2320 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 MARCH2Q9P0N8 246 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 IP6K2Q9UHH9 426 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 NAALADL1Q9UQQ1 740 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 REXO2Q9Y3B8 237 aaKnown RBP12.07□□□□□ -0.48
LSM2-214ENST00000493387 HBS1LQ9Y450 684 aaKnown RBP12.07□□□□□ -0.48
LSM2-214ENST00000493387 PAXBP1Q9Y5B6 917 aa12.07□□□□□ -0.48
LSM2-214ENST00000493387 C2orf78A6NCI8 922 aa12.06□□□□□ -0.48
LSM2-214ENST00000493387 GRXCR2A6NFK2 248 aa12.06□□□□□ -0.48
LSM2-214ENST00000493387 ZSCAN12O43309 604 aa12.06□□□□□ -0.48
LSM2-214ENST00000493387 ATMINO43313 823 aaPredicted RBP12.06□□□□□ -0.48
LSM2-214ENST00000493387 COCHO43405 550 aa12.06□□□□□ -0.48
LSM2-214ENST00000493387 KRT86O43790 486 aa12.06□□□□□ -0.48
LSM2-214ENST00000493387 CKMP06732 381 aa12.06□□□□□ -0.48
LSM2-214ENST00000493387 SLC2A3P11169 496 aa12.06□□□□□ -0.48
LSM2-214ENST00000493387 MBL2P11226 248 aaPredicted RBP12.06□□□□□ -0.48
LSM2-214ENST00000493387 GJA1P17302 382 aa12.06□□□□□ -0.48
LSM2-214ENST00000493387 RFC1P35251 1148 aaPredicted RBP12.06□□□□□ -0.48
LSM2-214ENST00000493387 ARHGAP25P42331 645 aa12.06□□□□□ -0.48
LSM2-214ENST00000493387 PTPN9P43378 593 aa12.06□□□□□ -0.48
LSM2-214ENST00000493387 NOP2P46087 812 aaKnown RBP12.06□□□□□ -0.48
LSM2-214ENST00000493387 PGFP49763 221 aa12.06□□□□□ -0.48
LSM2-214ENST00000493387 HADHBP55084 474 aaKnown RBP12.06□□□□□ -0.48
LSM2-214ENST00000493387 PIGHQ14442 188 aaPredicted RBP12.06□□□□□ -0.48
LSM2-214ENST00000493387 SND1Q7KZF4 910 aaKnown RBP eCLIP12.06□□□□□ -0.48
LSM2-214ENST00000493387 GET4Q7L5D6 327 aaPredicted RBP12.06□□□□□ -0.48
LSM2-214ENST00000493387 NPAS3Q8IXF0 933 aa12.06□□□□□ -0.48
LSM2-214ENST00000493387 KIAA1958Q8N8K9 716 aa12.06□□□□□ -0.48
LSM2-214ENST00000493387 ARL14EPQ8N8R7 260 aaPredicted RBP12.06□□□□□ -0.48
LSM2-214ENST00000493387 SLC35G2Q8TBE7 412 aa12.06□□□□□ -0.48
LSM2-214ENST00000493387 DQX1Q8TE96 717 aaKnown RBP12.06□□□□□ -0.48
LSM2-214ENST00000493387 ING5Q8WYH8 240 aa12.06□□□□□ -0.48
LSM2-214ENST00000493387 NT5C3BQ969T7 300 aa12.06□□□□□ -0.48
LSM2-214ENST00000493387 E2F7Q96AV8 911 aa12.06□□□□□ -0.48
LSM2-214ENST00000493387 ARHGEF26Q96DR7 871 aa12.06□□□□□ -0.48
LSM2-214ENST00000493387 TRIM44Q96DX7 344 aaPredicted RBP12.06□□□□□ -0.48
LSM2-214ENST00000493387 PGAP3Q96FM1 320 aaPredicted RBP12.06□□□□□ -0.48
LSM2-214ENST00000493387 ZNF830Q96NB3 372 aaPredicted RBP12.06□□□□□ -0.48
LSM2-214ENST00000493387 NPY6RQ99463 290 aa12.06□□□□□ -0.48
LSM2-214ENST00000493387 CNPY3Q9BT09 278 aa12.06□□□□□ -0.48
LSM2-214ENST00000493387 PHF7Q9BWX1 381 aaPredicted RBP12.06□□□□□ -0.48
LSM2-214ENST00000493387 POMKQ9H5K3 350 aa12.06□□□□□ -0.48
LSM2-214ENST00000493387 CCSER2Q9H7U1 834 aa12.06□□□□□ -0.48
LSM2-214ENST00000493387 KIF9Q9HAQ2 790 aa12.06□□□□□ -0.48
LSM2-214ENST00000493387 ARHGAP26Q9UNA1 814 aa12.06□□□□□ -0.48
LSM2-214ENST00000493387 NR2E1Q9Y466 385 aa12.06□□□□□ -0.48
LSM2-214ENST00000493387 DOCK6Q96HP0 2047 aa12.05□□□□□ -0.48
LSM2-214ENST00000493387 NOTCH4Q99466 2003 aa12.05□□□□□ -0.48
LSM2-214ENST00000493387 RNF8O76064 485 aa12.05□□□□□ -0.48
LSM2-214ENST00000493387 TRUB2O95900 331 aaKnown RBP12.05□□□□□ -0.48
LSM2-214ENST00000493387 TCF3P15923 654 aa12.05□□□□□ -0.48
LSM2-214ENST00000493387 PSMA2P25787 234 aa12.05□□□□□ -0.48
LSM2-214ENST00000493387 GBP2P32456 591 aaPredicted RBP12.05□□□□□ -0.48
LSM2-214ENST00000493387 FLT3P36888 993 aa12.05□□□□□ -0.48
LSM2-214ENST00000493387 SULT1E1P49888 294 aa12.05□□□□□ -0.48
LSM2-214ENST00000493387 RPL7AP62424 266 aaKnown RBP12.05□□□□□ -0.48
LSM2-214ENST00000493387 EFEMP1Q12805 493 aa12.05□□□□□ -0.48
LSM2-214ENST00000493387 TRIP4Q15650 581 aaPredicted RBP12.05□□□□□ -0.48
LSM2-214ENST00000493387 SMAD2Q15796 467 aaKnown RBP12.05□□□□□ -0.48
LSM2-214ENST00000493387 SYPL2Q5VXT5 272 aa12.05□□□□□ -0.48
LSM2-214ENST00000493387 PTCRAQ6ISU1 281 aaPredicted RBP12.05□□□□□ -0.48
LSM2-214ENST00000493387 STRADAQ7RTN6 431 aa12.05□□□□□ -0.48
LSM2-214ENST00000493387 PLCD3Q8N3E9 789 aa12.05□□□□□ -0.48
LSM2-214ENST00000493387 RNF10Q8N5U6 811 aaKnown RBP12.05□□□□□ -0.48
LSM2-214ENST00000493387 EMC1Q8N766 993 aa12.05□□□□□ -0.48
LSM2-214ENST00000493387 JOSD2Q8TAC2 188 aa12.05□□□□□ -0.48
LSM2-214ENST00000493387 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.05□□□□□ -0.48
LSM2-214ENST00000493387 ZSCAN18Q8TBC5 510 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms