RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 PLEKHG4Q58EX7 1191 aa14.61□□□□□ -0.07
PTPN7-216ENST00000492977 PRUNE1Q86TP1 453 aa14.61□□□□□ -0.07
PTPN7-216ENST00000492977 PCDH19Q8TAB3 1148 aa14.61□□□□□ -0.07
PTPN7-216ENST00000492977 IRGQQ8WZA9 623 aa14.61□□□□□ -0.07
PTPN7-216ENST00000492977 FAM193BQ96PV7 902 aaPredicted RBP14.61□□□□□ -0.07
PTPN7-216ENST00000492977 CDC42EP4Q9H3Q1 356 aaKnown RBP14.61□□□□□ -0.07
PTPN7-216ENST00000492977 DHX35Q9H5Z1 703 aaKnown RBP14.61□□□□□ -0.07
PTPN7-216ENST00000492977 PNPLA8Q9NP80 782 aa14.61□□□□□ -0.07
PTPN7-216ENST00000492977 PRDM10Q9NQV6 1147 aa14.61□□□□□ -0.07
PTPN7-216ENST00000492977 TBC1D13Q9NVG8 400 aa14.61□□□□□ -0.07
PTPN7-216ENST00000492977 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.61□□□□□ -0.07
PTPN7-216ENST00000492977 RCOR3Q9P2K3 495 aaPredicted RBP14.61□□□□□ -0.07
PTPN7-216ENST00000492977 FZD10Q9ULW2 581 aa14.61□□□□□ -0.07
PTPN7-216ENST00000492977 SHOC2Q9UQ13 582 aa14.61□□□□□ -0.07
PTPN7-216ENST00000492977 CFAP69A5D8W1 941 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 SMAPO00193 183 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 NRP1O14786 923 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 TTC4O95801 387 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 CYP2F1P24903 491 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 ATXN1P54253 815 aaKnown RBP14.6□□□□□ -0.07
PTPN7-216ENST00000492977 CACNA2D1P54289 1103 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 AIF1P55008 147 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 YWHAHQ04917 246 aaPredicted RBP14.6□□□□□ -0.07
PTPN7-216ENST00000492977 RNASELQ05823 741 aaKnown RBP14.6□□□□□ -0.07
PTPN7-216ENST00000492977 GPNMBQ14956 572 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 PPP6R3Q5H9R7 873 aaPredicted RBP14.6□□□□□ -0.07
PTPN7-216ENST00000492977 RNASEH2BQ5TBB1 312 aaKnown RBP14.6□□□□□ -0.07
PTPN7-216ENST00000492977 KCTD16Q68DU8 428 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 DARS2Q6PI48 645 aaKnown RBP14.6□□□□□ -0.07
PTPN7-216ENST00000492977 UNC45BQ8IWX7 931 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 OR10T2Q8NGX3 314 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 SEPT8Q92599 483 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 APBB2Q92870 758 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 SLC9A7Q96T83 725 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 ROPN1BQ9BZX4 212 aaPredicted RBP14.6□□□□□ -0.07
PTPN7-216ENST00000492977 NRDE2Q9H7Z3 1164 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 ROPN1Q9HAT0 212 aaPredicted RBP14.6□□□□□ -0.07
PTPN7-216ENST00000492977 DMAP1Q9NPF5 467 aaPredicted RBP14.6□□□□□ -0.07
PTPN7-216ENST00000492977 TMEM30AQ9NV96 361 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 MTMR10Q9NXD2 777 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 CALCOCO1Q9P1Z2 691 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 OGDHLQ9ULD0 1010 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 PCDHB7Q9Y5E2 793 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 YJEFN3A6XGL0 299 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 E7ENQ6 273 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 M0QYT0 321 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 CAPN9O14815 690 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 OAZ2O95190 189 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 LTFP02788 710 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 SHBGP04278 402 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 FYNP06241 537 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 BDNFP23560 247 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 RPL22P35268 128 aaKnown RBP14.6□□□□□ -0.07
PTPN7-216ENST00000492977 NR2C2P49116 596 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 SKOR1P84550 965 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 DEUP1Q05D60 604 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 DSG2Q14126 1118 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 C6orf118Q5T5N4 469 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 OTUD1Q5VV17 481 aaPredicted RBP14.6□□□□□ -0.07
PTPN7-216ENST00000492977 SYPL2Q5VXT5 272 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 PM20D1Q6GTS8 502 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 C1orf228Q6PIY5 440 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 NPNTQ6UXI9 565 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 C4orf50Q6ZRC1 276 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 HFE2Q6ZVN8 426 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 GPRIN1Q7Z2K8 1008 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 LRRTM3Q86VH5 581 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 CCDC185Q8N715 623 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 DBF4BQ8NFT6 615 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 PGAP3Q96FM1 320 aaPredicted RBP14.6□□□□□ -0.07
PTPN7-216ENST00000492977 KCTD15Q96SI1 283 aaPredicted RBP14.6□□□□□ -0.07
PTPN7-216ENST00000492977 CENPHQ9H3R5 247 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 TMLHEQ9NVH6 421 aa14.6□□□□□ -0.07
PTPN7-216ENST00000492977 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.59□□□□□ -0.07
PTPN7-216ENST00000492977 BCLAF3A2AJT9 711 aaKnown RBP14.59□□□□□ -0.07
PTPN7-216ENST00000492977 H7C0C1 242 aa14.59□□□□□ -0.07
PTPN7-216ENST00000492977 B4GALT3O60512 393 aa14.59□□□□□ -0.07
PTPN7-216ENST00000492977 F9P00740 461 aa14.59□□□□□ -0.07
PTPN7-216ENST00000492977 USP17L7P0C7H9 530 aa14.59□□□□□ -0.07
PTPN7-216ENST00000492977 ARL4AP40617 200 aa14.59□□□□□ -0.07
PTPN7-216ENST00000492977 OR1G1P47890 313 aa14.59□□□□□ -0.07
PTPN7-216ENST00000492977 ATP5OP48047 213 aa14.59□□□□□ -0.07
PTPN7-216ENST00000492977 LMAN1P49257 510 aa14.59□□□□□ -0.07
PTPN7-216ENST00000492977 GDF10P55107 478 aa14.59□□□□□ -0.07
PTPN7-216ENST00000492977 XRCC4Q13426 336 aa14.59□□□□□ -0.07
PTPN7-216ENST00000492977 KDM7AQ6ZMT4 941 aa14.59□□□□□ -0.07
PTPN7-216ENST00000492977 FAM131BQ86XD5 332 aa14.59□□□□□ -0.07
PTPN7-216ENST00000492977 PPIL6Q8IXY8 311 aa14.59□□□□□ -0.07
PTPN7-216ENST00000492977 ABI1Q8IZP0 508 aa14.59□□□□□ -0.07
PTPN7-216ENST00000492977 SH2D3CQ8N5H7 860 aa14.59□□□□□ -0.07
PTPN7-216ENST00000492977 ARFGAP2Q8N6H7 521 aa14.59□□□□□ -0.07
PTPN7-216ENST00000492977 FAM71DQ8N9W8 422 aa14.59□□□□□ -0.07
PTPN7-216ENST00000492977 PGM2Q96G03 612 aa14.59□□□□□ -0.07
PTPN7-216ENST00000492977 DEFB118Q96PH6 123 aa14.59□□□□□ -0.07
PTPN7-216ENST00000492977 CSPG4P5Q96PW8 444 aa14.59□□□□□ -0.07
PTPN7-216ENST00000492977 RBM15Q96T37 977 aaKnown RBP eCLIP14.59□□□□□ -0.07
PTPN7-216ENST00000492977 TRIM62Q9BVG3 475 aa14.59□□□□□ -0.07
PTPN7-216ENST00000492977 PHACTR1Q9C0D0 580 aa14.59□□□□□ -0.07
PTPN7-216ENST00000492977 NAALADL1Q9UQQ1 740 aa14.59□□□□□ -0.07
PTPN7-216ENST00000492977 CENPFP49454 3210 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms