RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 CNPP09543 421 aaKnown RBP8.38□□□□□ -1.07
FDPS-218ENST00000492887 ATF2P15336 505 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 TCF4P15884 667 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 ATF6P18850 670 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 PCK1P35558 622 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 ATXN1P54253 815 aaKnown RBP8.38□□□□□ -1.07
FDPS-218ENST00000492887 DYNLT1P63172 113 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 TAF10Q12962 218 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 RAB33AQ14088 237 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 ARL13BQ3SXY8 428 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 SLC25A52Q3SY17 297 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 PPP6R3Q5H9R7 873 aaPredicted RBP8.38□□□□□ -1.07
FDPS-218ENST00000492887 EFHC2Q5JST6 749 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 PPM1LQ5SGD2 360 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 SH3PXD2AQ5TCZ1 1133 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 DCAF12L1Q5VU92 463 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 C8orf74Q6P047 294 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 CCDC149Q6ZUS6 474 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 STRADAQ7RTN6 431 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 TAC4Q86UU9 113 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 ITIH5Q86UX2 942 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 FAM131BQ86XD5 332 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 MAP7D3Q8IWC1 876 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 KLHL7Q8IXQ5 586 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 KATNAL2Q8IYT4 538 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 PDZD8Q8NEN9 1154 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 MYRIPQ8NFW9 859 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 EXD1Q8NHP7 514 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 UBXN4Q92575 508 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 ALG3Q92685 438 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 CD101Q93033 1021 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 RPGRIP1Q96KN7 1286 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 SPATA17Q96L03 361 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 CCDC114Q96M63 670 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 ZNF512Q96ME7 567 aaPredicted RBP8.38□□□□□ -1.07
FDPS-218ENST00000492887 KLHL5Q96PQ7 755 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 SLC2A13Q96QE2 648 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 DDX23Q9BUQ8 820 aaKnown RBP8.38□□□□□ -1.07
FDPS-218ENST00000492887 SNRNP25Q9BV90 132 aaKnown RBP8.38□□□□□ -1.07
FDPS-218ENST00000492887 AP1M1Q9BXS5 423 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 CRISPLD1Q9H336 500 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 DHX35Q9H5Z1 703 aaKnown RBP8.38□□□□□ -1.07
FDPS-218ENST00000492887 ABCC13Q9NSE7 274 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.38□□□□□ -1.07
FDPS-218ENST00000492887 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.38□□□□□ -1.07
FDPS-218ENST00000492887 SFMBT1Q9UHJ3 866 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 NUDT5Q9UKK9 219 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 AP4E1Q9UPM8 1137 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 SCML2Q9UQR0 700 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 LZTS1Q9Y250 596 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 ANKRD36A6QL64 1941 aa8.38□□□□□ -1.07
FDPS-218ENST00000492887 NYNRINQ9P2P1 1898 aaKnown RBP8.38□□□□□ -1.07
FDPS-218ENST00000492887 KIF26AQ9ULI4 1882 aaPredicted RBP8.38□□□□□ -1.07
FDPS-218ENST00000492887 MKI67P46013 3256 aaKnown RBP8.37□□□□□ -1.07
FDPS-218ENST00000492887 H0YGN5 161 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 CCDC188H7C350 402 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 TNFRSF10BO14763 440 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 GRM6O15303 877 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 ARHGEF15O94989 841 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 VNN2O95498 520 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 EFEMP2O95967 443 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 MOCS2O96007 188 aaPredicted RBP8.37□□□□□ -1.07
FDPS-218ENST00000492887 APOEP02649 317 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 C8AP07357 584 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 HMBSP08397 361 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 RHOXF2BP0C7M4 288 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 RARAP10276 462 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 PYGMP11217 842 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 RARGP13631 454 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 TFE3P19532 575 aaPredicted RBP8.37□□□□□ -1.07
FDPS-218ENST00000492887 PBX2P40425 430 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 ARL4AP40617 200 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 PSEN1P49768 467 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 ERVFC1P60507 584 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 USP46P62068 366 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 PITX1P78337 314 aaPredicted RBP8.37□□□□□ -1.07
FDPS-218ENST00000492887 SLC25A11Q02978 314 aaKnown RBP8.37□□□□□ -1.07
FDPS-218ENST00000492887 EFEMP1Q12805 493 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 MMRN1Q13201 1228 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 ATP13A4Q4VNC1 1196 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 RAB6CQ53S08 254 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 C10orf120Q5SQS8 335 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 RASIP1Q5U651 963 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 SYPL2Q5VXT5 272 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 TXNRD3NBQ6F5E7 133 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 PM20D1Q6GTS8 502 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 ELMSAN1Q6PJG2 1045 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 SPOCD1Q6ZMY3 1216 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 ARCQ7LC44 396 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 POLNQ7Z5Q5 900 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 SPRED2Q7Z698 418 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 TADA2BQ86TJ2 420 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 MON1AQ86VX9 555 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 SLC13A5Q86YT5 568 aaPredicted RBP8.37□□□□□ -1.07
FDPS-218ENST00000492887 CREG2Q8IUH2 290 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 RCOR2Q8IZ40 523 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 SCML4Q8N228 414 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 LRRN4CLQ8ND94 238 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 TTC16Q8NEE8 873 aa8.37□□□□□ -1.07
FDPS-218ENST00000492887 SPPL3Q8TCT6 385 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms