RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 MARK1Q9P0L2 795 aa19.41■□□□□ 0.7
CHD1L-209ENST00000492728 DNMT3LQ9UJW3 386 aa19.41■□□□□ 0.7
CHD1L-209ENST00000492728 TCRBV21S2A2A0A5A6 115 aa19.4■□□□□ 0.7
CHD1L-209ENST00000492728 PRRT4C9JH25 899 aa19.4■□□□□ 0.7
CHD1L-209ENST00000492728 TYRP14679 529 aa19.4■□□□□ 0.7
CHD1L-209ENST00000492728 TRIM21P19474 475 aaKnown RBP19.4■□□□□ 0.7
CHD1L-209ENST00000492728 BMP6P22004 513 aa19.4■□□□□ 0.7
CHD1L-209ENST00000492728 P2RY2P41231 377 aa19.4■□□□□ 0.7
CHD1L-209ENST00000492728 WASP42768 502 aa19.4■□□□□ 0.7
CHD1L-209ENST00000492728 LIMK1P53667 647 aa19.4■□□□□ 0.7
CHD1L-209ENST00000492728 FKBP3Q00688 224 aaKnown RBP19.4■□□□□ 0.7
CHD1L-209ENST00000492728 CUL2Q13617 745 aa19.4■□□□□ 0.7
CHD1L-209ENST00000492728 HSF5Q4G112 596 aaPredicted RBP19.4■□□□□ 0.7
CHD1L-209ENST00000492728 USP39Q53GS9 565 aaKnown RBP19.4■□□□□ 0.7
CHD1L-209ENST00000492728 EOGTQ5NDL2 527 aa19.4■□□□□ 0.7
CHD1L-209ENST00000492728 ZNF513Q8N8E2 541 aaPredicted RBP19.4■□□□□ 0.7
CHD1L-209ENST00000492728 HMGB4Q8WW32 186 aa19.4■□□□□ 0.7
CHD1L-209ENST00000492728 NDRG1Q92597 394 aaKnown RBP19.4■□□□□ 0.7
CHD1L-209ENST00000492728 BHMTQ93088 406 aa19.4■□□□□ 0.7
CHD1L-209ENST00000492728 CCDC34Q96HJ3 373 aa19.4■□□□□ 0.7
CHD1L-209ENST00000492728 TSG101Q99816 390 aa19.4■□□□□ 0.7
CHD1L-209ENST00000492728 BBS2Q9BXC9 721 aa19.4■□□□□ 0.7
CHD1L-209ENST00000492728 CD248Q9HCU0 757 aa19.4■□□□□ 0.7
CHD1L-209ENST00000492728 VPS45Q9NRW7 570 aa19.4■□□□□ 0.7
CHD1L-209ENST00000492728 MBD1Q9UIS9 605 aaPredicted RBP19.4■□□□□ 0.7
CHD1L-209ENST00000492728 MAN1B1Q9UKM7 699 aa19.4■□□□□ 0.7
CHD1L-209ENST00000492728 CNOT1A5YKK6 2376 aaKnown RBP19.39■□□□□ 0.69
CHD1L-209ENST00000492728 A0A1W2PQF6 199 aa19.39■□□□□ 0.69
CHD1L-209ENST00000492728 PATE3B3GLJ2 98 aa19.39■□□□□ 0.69
CHD1L-209ENST00000492728 STX10O60499 249 aa19.39■□□□□ 0.69
CHD1L-209ENST00000492728 FOXD2O60548 495 aaPredicted RBP19.39■□□□□ 0.69
CHD1L-209ENST00000492728 RHOBTB1O94844 696 aa19.39■□□□□ 0.69
CHD1L-209ENST00000492728 NUCB2P80303 420 aa19.39■□□□□ 0.69
CHD1L-209ENST00000492728 GOLGA7BQ2TAP0 167 aa19.39■□□□□ 0.69
CHD1L-209ENST00000492728 MAP7D1Q3KQU3 841 aa19.39■□□□□ 0.69
CHD1L-209ENST00000492728 STPG1Q5TH74 334 aa19.39■□□□□ 0.69
CHD1L-209ENST00000492728 GRAMD4Q6IC98 578 aa19.39■□□□□ 0.69
CHD1L-209ENST00000492728 ERLEC1Q96DZ1 483 aa19.39■□□□□ 0.69
CHD1L-209ENST00000492728 TIGD1Q96MW7 591 aa19.39■□□□□ 0.69
CHD1L-209ENST00000492728 PLK2Q9NYY3 685 aa19.39■□□□□ 0.69
CHD1L-209ENST00000492728 CLIC5Q9NZA1 410 aa19.39■□□□□ 0.69
CHD1L-209ENST00000492728 RASAL2Q9UJF2 1139 aa19.39■□□□□ 0.69
CHD1L-209ENST00000492728 LSM7Q9UK45 103 aaKnown RBP19.39■□□□□ 0.69
CHD1L-209ENST00000492728 MYO18AQ92614 2054 aaKnown RBP19.39■□□□□ 0.69
CHD1L-209ENST00000492728 GOLGA6L4A6NEF3 574 aa19.38■□□□□ 0.69
CHD1L-209ENST00000492728 SMC2O95347 1197 aa19.38■□□□□ 0.69
CHD1L-209ENST00000492728 CAVIN2O95810 425 aa19.38■□□□□ 0.69
CHD1L-209ENST00000492728 HMBSP08397 361 aa19.38■□□□□ 0.69
CHD1L-209ENST00000492728 ADRB1P08588 477 aa19.38■□□□□ 0.69
CHD1L-209ENST00000492728 CISD3P0C7P0 127 aa19.38■□□□□ 0.69
CHD1L-209ENST00000492728 PLA2G4AP47712 749 aa19.38■□□□□ 0.69
CHD1L-209ENST00000492728 LRRC63Q05C16 580 aa19.38■□□□□ 0.69
CHD1L-209ENST00000492728 PDE4CQ08493 712 aa19.38■□□□□ 0.69
CHD1L-209ENST00000492728 EFEMP1Q12805 493 aa19.38■□□□□ 0.69
CHD1L-209ENST00000492728 LRMPQ12912 555 aa19.38■□□□□ 0.69
CHD1L-209ENST00000492728 BECN1Q14457 450 aa19.38■□□□□ 0.69
CHD1L-209ENST00000492728 KIAA1211LQ6NV74 962 aa19.38■□□□□ 0.69
CHD1L-209ENST00000492728 ZNF276Q8N554 614 aa19.38■□□□□ 0.69
CHD1L-209ENST00000492728 ANKRD52Q8NB46 1076 aa19.38■□□□□ 0.69
CHD1L-209ENST00000492728 ARMCX3Q9UH62 379 aaPredicted RBP19.38■□□□□ 0.69
CHD1L-209ENST00000492728 TSPAN16Q9UKR8 245 aa19.38■□□□□ 0.69
CHD1L-209ENST00000492728 STARD13Q9Y3M8 1113 aa19.38■□□□□ 0.69
CHD1L-209ENST00000492728 TNRC6BQ9UPQ9 1833 aaKnown RBP19.37■□□□□ 0.69
CHD1L-209ENST00000492728 LNP1A1A4G5 178 aa19.37■□□□□ 0.69
CHD1L-209ENST00000492728 ALDH1A2O94788 518 aa19.37■□□□□ 0.69
CHD1L-209ENST00000492728 GABRG2P18507 467 aa19.37■□□□□ 0.69
CHD1L-209ENST00000492728 CORO1AP31146 461 aaKnown RBP19.37■□□□□ 0.69
CHD1L-209ENST00000492728 PSEN1P49768 467 aa19.37■□□□□ 0.69
CHD1L-209ENST00000492728 GOLGA8FQ08AF8 430 aa19.37■□□□□ 0.69
CHD1L-209ENST00000492728 GOLGA8DPQ0D2H9 430 aa19.37■□□□□ 0.69
CHD1L-209ENST00000492728 TTC39CQ8N584 583 aa19.37■□□□□ 0.69
CHD1L-209ENST00000492728 KAT5Q92993 513 aa19.37■□□□□ 0.69
CHD1L-209ENST00000492728 ZSWIM1Q9BR11 485 aa19.37■□□□□ 0.69
CHD1L-209ENST00000492728 ULBP1Q9BZM6 244 aa19.37■□□□□ 0.69
CHD1L-209ENST00000492728 UBXN6Q9BZV1 441 aa19.37■□□□□ 0.69
CHD1L-209ENST00000492728 POLMQ9NP87 494 aaPredicted RBP19.37■□□□□ 0.69
CHD1L-209ENST00000492728 BCCIPQ9P287 314 aaKnown RBP eCLIP19.37■□□□□ 0.69
CHD1L-209ENST00000492728 NUP205Q92621 2012 aa19.37■□□□□ 0.69
CHD1L-209ENST00000492728 THADAQ6YHU6 1953 aa19.37■□□□□ 0.69
CHD1L-209ENST00000492728 PLXND1Q9Y4D7 1925 aa19.37■□□□□ 0.69
CHD1L-209ENST00000492728 TPRP12270 2363 aaKnown RBP19.36■□□□□ 0.69
CHD1L-209ENST00000492728 GADD45BO75293 160 aaPredicted RBP19.36■□□□□ 0.69
CHD1L-209ENST00000492728 PENKP01210 267 aaPredicted RBP19.36■□□□□ 0.69
CHD1L-209ENST00000492728 CALCAP01258 141 aa19.36■□□□□ 0.69
CHD1L-209ENST00000492728 RALAP11233 206 aa19.36■□□□□ 0.69
CHD1L-209ENST00000492728 HOXB2P14652 356 aa19.36■□□□□ 0.69
CHD1L-209ENST00000492728 PTGER3P43115 390 aa19.36■□□□□ 0.69
CHD1L-209ENST00000492728 FMO5P49326 533 aa19.36■□□□□ 0.69
CHD1L-209ENST00000492728 TKTL1P51854 596 aa19.36■□□□□ 0.69
CHD1L-209ENST00000492728 YWHAGP61981 247 aaKnown RBP eCLIP19.36■□□□□ 0.69
CHD1L-209ENST00000492728 FYB2Q5VWT5 728 aa19.36■□□□□ 0.69
CHD1L-209ENST00000492728 TTI2Q6NXR4 508 aa19.36■□□□□ 0.69
CHD1L-209ENST00000492728 ARMCX6Q7L4S7 300 aa19.36■□□□□ 0.69
CHD1L-209ENST00000492728 TFAP2BQ92481 460 aa19.36■□□□□ 0.69
CHD1L-209ENST00000492728 XPO6Q96QU8 1125 aaKnown RBP19.36■□□□□ 0.69
CHD1L-209ENST00000492728 EDEM2Q9BV94 578 aa19.36■□□□□ 0.69
CHD1L-209ENST00000492728 FAM124BQ9H5Z6 455 aaPredicted RBP19.36■□□□□ 0.69
CHD1L-209ENST00000492728 CD93Q9NPY3 652 aa19.36■□□□□ 0.69
CHD1L-209ENST00000492728 CALCOCO1Q9P1Z2 691 aa19.36■□□□□ 0.69
CHD1L-209ENST00000492728 WDR35Q9P2L0 1181 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms