RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 CETN2P41208 172 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 FAM193AP78312 1265 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 ERMARDQ5T6L9 678 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 FBXO22Q8NEZ5 403 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 PWWP2AQ96N64 755 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 KCTD15Q96SI1 283 aaPredicted RBP14.5□□□□□ -0.09
SMPD4-219ENST00000491128 NPY6RQ99463 290 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 ETNK2Q9NVF9 386 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 DNAJC17Q9NVM6 304 aaKnown RBP14.5□□□□□ -0.09
SMPD4-219ENST00000491128 PCYOX1Q9UHG3 505 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 A0A1W2PQH9 124 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 ARHGEF37A1IGU5 675 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 WDR27A2RRH5 827 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 FAM72CH0Y354 149 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 MDM4O15151 490 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 ECEL1O95672 775 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 TBX18O95935 607 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 SPATA31D3P0C874 917 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 GOT1P17174 413 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 GDF10P55107 478 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 CASP8Q14790 479 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 ACAP1Q15027 740 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 SYCP2LQ5T4T6 812 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 FAM72AQ5TYM5 149 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 FAM72DQ6L9T8 149 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 SPATA31D4Q6ZUB0 917 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 MTERF4Q7Z6M4 381 aaKnown RBP14.5□□□□□ -0.09
SMPD4-219ENST00000491128 FAM72BQ86X60 149 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 TSEN2Q8NCE0 465 aaKnown RBP14.5□□□□□ -0.09
SMPD4-219ENST00000491128 PCDH19Q8TAB3 1148 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 AENQ8WTP8 325 aaKnown RBP14.5□□□□□ -0.09
SMPD4-219ENST00000491128 ZNF689Q96CS4 500 aaPredicted RBP14.5□□□□□ -0.09
SMPD4-219ENST00000491128 SLC2A13Q96QE2 648 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 MAK16Q9BXY0 300 aaKnown RBP14.5□□□□□ -0.09
SMPD4-219ENST00000491128 MTMR10Q9NXD2 777 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.5□□□□□ -0.09
SMPD4-219ENST00000491128 PCDHB5Q9Y5E4 795 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 MICAL3Q7RTP6 2002 aa14.5□□□□□ -0.09
SMPD4-219ENST00000491128 LIASO43766 372 aa14.49□□□□□ -0.09
SMPD4-219ENST00000491128 L1CAMP32004 1257 aa14.49□□□□□ -0.09
SMPD4-219ENST00000491128 SCD5Q86SK9 330 aa14.49□□□□□ -0.09
SMPD4-219ENST00000491128 HNRNPLLQ8WVV9 542 aaKnown RBP14.49□□□□□ -0.09
SMPD4-219ENST00000491128 TMEM175Q9BSA9 504 aa14.49□□□□□ -0.09
SMPD4-219ENST00000491128 FAM204AQ9H8W3 233 aa14.49□□□□□ -0.09
SMPD4-219ENST00000491128 ASIC3Q9UHC3 531 aa14.49□□□□□ -0.09
SMPD4-219ENST00000491128 ARSEP51690 589 aa14.49□□□□□ -0.09
SMPD4-219ENST00000491128 MTM1Q13496 603 aa14.49□□□□□ -0.09
SMPD4-219ENST00000491128 BYSLQ13895 437 aaKnown RBP14.49□□□□□ -0.09
SMPD4-219ENST00000491128 BOLA3Q53S33 107 aa14.49□□□□□ -0.09
SMPD4-219ENST00000491128 UBAP2Q5T6F2 1119 aaKnown RBP14.49□□□□□ -0.09
SMPD4-219ENST00000491128 DUPD1Q68J44 220 aa14.49□□□□□ -0.09
SMPD4-219ENST00000491128 TAC4Q86UU9 113 aa14.49□□□□□ -0.09
SMPD4-219ENST00000491128 PQLC3Q8N755 202 aa14.49□□□□□ -0.09
SMPD4-219ENST00000491128 FBXO25Q8TCJ0 367 aa14.49□□□□□ -0.09
SMPD4-219ENST00000491128 ZBED2Q9BTP6 218 aa14.49□□□□□ -0.09
SMPD4-219ENST00000491128 PRKAG2Q9UGJ0 569 aa14.49□□□□□ -0.09
SMPD4-219ENST00000491128 LCMT1Q9UIC8 334 aa14.49□□□□□ -0.09
SMPD4-219ENST00000491128 EYSQ5T1H1 3165 aa14.49□□□□□ -0.09
SMPD4-219ENST00000491128 FBXO21O94952 628 aa14.48□□□□□ -0.09
SMPD4-219ENST00000491128 AMPD1P23109 780 aa14.48□□□□□ -0.09
SMPD4-219ENST00000491128 YWHAGP61981 247 aaKnown RBP eCLIP14.48□□□□□ -0.09
SMPD4-219ENST00000491128 ROR1Q01973 937 aa14.48□□□□□ -0.09
SMPD4-219ENST00000491128 PSMD5Q16401 504 aa14.48□□□□□ -0.09
SMPD4-219ENST00000491128 ANKRD20A8PQ5CZ79 823 aa14.48□□□□□ -0.09
SMPD4-219ENST00000491128 PM20D1Q6GTS8 502 aa14.48□□□□□ -0.09
SMPD4-219ENST00000491128 TP53INP2Q8IXH6 220 aa14.48□□□□□ -0.09
SMPD4-219ENST00000491128 C12orf50Q8NA57 414 aaPredicted RBP14.48□□□□□ -0.09
SMPD4-219ENST00000491128 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.48□□□□□ -0.09
SMPD4-219ENST00000491128 TMEM169Q96HH4 297 aa14.48□□□□□ -0.09
SMPD4-219ENST00000491128 CWC15Q9P013 229 aaKnown RBP14.48□□□□□ -0.09
SMPD4-219ENST00000491128 STAP1Q9ULZ2 295 aa14.48□□□□□ -0.09
SMPD4-219ENST00000491128 USP3Q9Y6I4 520 aa14.48□□□□□ -0.09
SMPD4-219ENST00000491128 FNDC1Q4ZHG4 1894 aaPredicted RBP14.48□□□□□ -0.09
SMPD4-219ENST00000491128 LCHNA4D1U4 455 aa14.48□□□□□ -0.09
SMPD4-219ENST00000491128 RFC2P35250 354 aa14.48□□□□□ -0.09
SMPD4-219ENST00000491128 NUMBP49757 651 aa14.48□□□□□ -0.09
SMPD4-219ENST00000491128 DHX34Q14147 1143 aaKnown RBP14.48□□□□□ -0.09
SMPD4-219ENST00000491128 CCNG2Q16589 344 aa14.48□□□□□ -0.09
SMPD4-219ENST00000491128 NFE2Q16621 373 aaPredicted RBP14.48□□□□□ -0.09
SMPD4-219ENST00000491128 USP41Q3LFD5 358 aa14.48□□□□□ -0.09
SMPD4-219ENST00000491128 SPATA18Q8TC71 538 aa14.48□□□□□ -0.09
SMPD4-219ENST00000491128 CASP10Q92851 521 aa14.48□□□□□ -0.09
SMPD4-219ENST00000491128 RNF34Q969K3 372 aa14.48□□□□□ -0.09
SMPD4-219ENST00000491128 NT5C3BQ969T7 300 aa14.48□□□□□ -0.09
SMPD4-219ENST00000491128 ZNF558Q96NG5 402 aa14.48□□□□□ -0.09
SMPD4-219ENST00000491128 RNF157Q96PX1 679 aa14.48□□□□□ -0.09
SMPD4-219ENST00000491128 CLSTN3Q9BQT9 956 aa14.48□□□□□ -0.09
SMPD4-219ENST00000491128 RC3H2Q9HBD1 1191 aaKnown RBP14.48□□□□□ -0.09
SMPD4-219ENST00000491128 WDR6Q9NNW5 1121 aaKnown RBP14.48□□□□□ -0.09
SMPD4-219ENST00000491128 IL23AQ9NPF7 189 aa14.48□□□□□ -0.09
SMPD4-219ENST00000491128 GMIPQ9P107 970 aa14.48□□□□□ -0.09
SMPD4-219ENST00000491128 COL4A6Q14031 1691 aa14.48□□□□□ -0.09
SMPD4-219ENST00000491128 MYO7AQ13402 2215 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 SGK1O00141 431 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 TBC1D4O60343 1298 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 DESP17661 470 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 RDXP35241 583 aaKnown RBP14.47□□□□□ -0.09
SMPD4-219ENST00000491128 FNTAP49354 379 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 GBE1Q04446 702 aa14.47□□□□□ -0.09
SMPD4-219ENST00000491128 CLUL1Q15846 466 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms