RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 PCDHA13Q9Y5I0 950 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 EYSQ5T1H1 3165 aa11.26□□□□□ -0.61
CACNA1C-227ENST00000491104 TRAV19A0A0A6YYK7 116 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 ANKRD62A6NC57 917 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 RCCD1A6NED2 376 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 SIGLEC16A6NMB1 481 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 CAPN9O14815 690 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 SCAMP3O14828 347 aaKnown RBP11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 ARHGAP6O43182 974 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 OLFM2O95897 454 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 CKMP06732 381 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 HMBSP08397 361 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 TMEM253P0C7T8 217 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 MYBL1P10243 752 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 IRF1P10914 325 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 KRT3P12035 628 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 HDCP19113 662 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 DDX6P26196 483 aaKnown RBP eCLIP11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 RFC1P35251 1148 aaPredicted RBP11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 SCNN1AP37088 669 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 PSEN1P49768 467 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 SULT1E1P49888 294 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 TUBP50607 506 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 GPC5P78333 572 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 ZXDBP98169 803 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 OGDHQ02218 1023 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 MAMLD1Q13495 774 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 C15orf59Q2T9L4 293 aaPredicted RBP11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 RAB6CQ53S08 254 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 DCAF6Q58WW2 860 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 FAM78AQ5JUQ0 283 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 PPP1R15BQ5SWA1 713 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 OTUD1Q5VV17 481 aaPredicted RBP11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 MIB1Q86YT6 1006 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 ARID3BQ8IVW6 561 aaPredicted RBP11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 CMTM8Q8IZV2 173 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 CCDC112Q8NEF3 446 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 RIN3Q8TB24 985 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 DQX1Q8TE96 717 aaKnown RBP11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 RXFP2Q8WXD0 754 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 WBP2Q969T9 261 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 RSPRY1Q96DX4 576 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 TRIM11Q96F44 468 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 BTBD6Q96KE9 485 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 RPGRIP1Q96KN7 1286 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 CFAP57Q96MR6 1250 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 TBCBQ99426 244 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 NUP85Q9BW27 656 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 RAB6CQ9H0N0 254 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 CALCOCO1Q9P1Z2 691 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 CCL26Q9Y258 94 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 CPQQ9Y646 472 aa11.25□□□□□ -0.61
CACNA1C-227ENST00000491104 SLC12A8A0AV02 714 aa11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 C2CD4BA6NLJ0 364 aa11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 TRUB2O95900 331 aaKnown RBP11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 CYP1A2P05177 515 aa11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 GLI1P08151 1106 aa11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 GPD1P21695 349 aa11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 FCARP24071 287 aa11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 ATP5C1P36542 298 aaKnown RBP11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 AVPR1AP37288 418 aa11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 VIPR2P41587 438 aa11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 ATXN1P54253 815 aaKnown RBP11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 ZNF252P-AS1Q0IIN9 211 aa11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 CDO1Q16878 200 aa11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 SH3PXD2AQ5TCZ1 1133 aa11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 MSANTD2Q6P1R3 559 aa11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 DCUN1D2Q6PH85 259 aa11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 TDRD5Q8NAT2 981 aaKnown RBP11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 ZNF564Q8TBZ8 553 aaPredicted RBP11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 CTNNBL1Q8WYA6 563 aaPredicted RBP11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 USP13Q92995 863 aaPredicted RBP11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 ZFRQ96KR1 1074 aaKnown RBP11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 ASB16Q96NS5 453 aa11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 KXD1Q9BQD3 176 aa11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 DDX23Q9BUQ8 820 aaKnown RBP11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 PHF7Q9BWX1 381 aaPredicted RBP11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 FAM204AQ9H8W3 233 aa11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 OSGEPQ9NPF4 335 aa11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 GKN1Q9NS71 199 aa11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 PARVAQ9NVD7 372 aa11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 MARCH2Q9P0N8 246 aa11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 CTTNBP2NLQ9P2B4 639 aa11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 SCINQ9Y6U3 715 aa11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 A0A0C4DFX4 3053 aa11.24□□□□□ -0.61
CACNA1C-227ENST00000491104 SPTBN5Q9NRC6 3674 aaKnown RBP11.23□□□□□ -0.61
CACNA1C-227ENST00000491104 KIF26AQ9ULI4 1882 aaPredicted RBP11.23□□□□□ -0.61
CACNA1C-227ENST00000491104 M0QYT0 321 aa11.23□□□□□ -0.61
CACNA1C-227ENST00000491104 LEFTY2O00292 366 aa11.23□□□□□ -0.61
CACNA1C-227ENST00000491104 CCP110O43303 1012 aa11.23□□□□□ -0.61
CACNA1C-227ENST00000491104 IPO7O95373 1038 aaKnown RBP11.23□□□□□ -0.61
CACNA1C-227ENST00000491104 LAMP2P13473 410 aa11.23□□□□□ -0.61
CACNA1C-227ENST00000491104 PDGFRAP16234 1089 aa11.23□□□□□ -0.61
CACNA1C-227ENST00000491104 SDC4P31431 198 aa11.23□□□□□ -0.61
CACNA1C-227ENST00000491104 NOS2P35228 1153 aa11.23□□□□□ -0.61
CACNA1C-227ENST00000491104 MATKP42679 507 aa11.23□□□□□ -0.61
CACNA1C-227ENST00000491104 VAV2P52735 878 aa11.23□□□□□ -0.61
CACNA1C-227ENST00000491104 SLC7A9P82251 487 aa11.23□□□□□ -0.61
CACNA1C-227ENST00000491104 ATP11AP98196 1134 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms