RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 ANKEF1Q9NU02 776 aa20.04■□□□□ 0.8
SNAPC3-206ENST00000490969 MKS1Q9NXB0 559 aa20.04■□□□□ 0.8
SNAPC3-206ENST00000490969 CDH22Q9UJ99 828 aa20.04■□□□□ 0.8
SNAPC3-206ENST00000490969 CXorf49A8MYA2 514 aaPredicted RBP20.04■□□□□ 0.8
SNAPC3-206ENST00000490969 BTBD19C9JJ37 291 aa20.04■□□□□ 0.8
SNAPC3-206ENST00000490969 VWA5AO00534 786 aa20.04■□□□□ 0.8
SNAPC3-206ENST00000490969 TFAP2AP05549 437 aa20.04■□□□□ 0.8
SNAPC3-206ENST00000490969 EIF3EP60228 445 aaKnown RBP20.04■□□□□ 0.8
SNAPC3-206ENST00000490969 SLC25A11Q02978 314 aaKnown RBP20.04■□□□□ 0.8
SNAPC3-206ENST00000490969 BTKQ06187 659 aa20.04■□□□□ 0.8
SNAPC3-206ENST00000490969 BMPR2Q13873 1038 aa20.04■□□□□ 0.8
SNAPC3-206ENST00000490969 DENND5BQ6ZUT9 1274 aa20.04■□□□□ 0.8
SNAPC3-206ENST00000490969 NIPA1Q7RTP0 329 aa20.04■□□□□ 0.8
SNAPC3-206ENST00000490969 TMC7Q7Z402 723 aa20.04■□□□□ 0.8
SNAPC3-206ENST00000490969 SAMD3Q8N6K7 520 aa20.04■□□□□ 0.8
SNAPC3-206ENST00000490969 CLMNQ96JQ2 1002 aa20.04■□□□□ 0.8
SNAPC3-206ENST00000490969 XAB2Q9HCS7 855 aaKnown RBP20.04■□□□□ 0.8
SNAPC3-206ENST00000490969 AFG3L2Q9Y4W6 797 aa20.04■□□□□ 0.8
SNAPC3-206ENST00000490969 SF3B1O75533 1304 aaKnown RBP eCLIP20.03■□□□□ 0.85e-6■■■■■ 75
SNAPC3-206ENST00000490969 CLPTM1O96005 669 aa20.03■□□□□ 0.8
SNAPC3-206ENST00000490969 PROCP04070 461 aa20.03■□□□□ 0.8
SNAPC3-206ENST00000490969 TAP1Q03518 808 aa20.03■□□□□ 0.8
SNAPC3-206ENST00000490969 RABGAP1LQ5R372 815 aa20.03■□□□□ 0.8
SNAPC3-206ENST00000490969 LGSNQ5TDP6 509 aa20.03■□□□□ 0.8
SNAPC3-206ENST00000490969 KLC3Q6P597 504 aa20.03■□□□□ 0.8
SNAPC3-206ENST00000490969 KLHDC10Q6PID8 442 aa20.03■□□□□ 0.8
SNAPC3-206ENST00000490969 ACTRT2Q8TDY3 377 aa20.03■□□□□ 0.8
SNAPC3-206ENST00000490969 GCNAQ96QF7 691 aa20.03■□□□□ 0.8
SNAPC3-206ENST00000490969 APOL6Q9BWW8 343 aa20.03■□□□□ 0.8
SNAPC3-206ENST00000490969 THAP1Q9NVV9 213 aa20.03■□□□□ 0.8
SNAPC3-206ENST00000490969 POMPQ9Y244 141 aa20.03■□□□□ 0.8
SNAPC3-206ENST00000490969 NUB1Q9Y5A7 615 aa20.03■□□□□ 0.8
SNAPC3-206ENST00000490969 TTLL13PA6NNM8 815 aa20.03■□□□□ 0.8
SNAPC3-206ENST00000490969 KLHL2O95198 593 aa20.03■□□□□ 0.8
SNAPC3-206ENST00000490969 KDELR1P24390 212 aa20.03■□□□□ 0.8
SNAPC3-206ENST00000490969 TBXAS1P24557 533 aaPredicted RBP20.03■□□□□ 0.8
SNAPC3-206ENST00000490969 IL1R2P27930 398 aa20.03■□□□□ 0.8
SNAPC3-206ENST00000490969 FDFT1P37268 417 aa20.03■□□□□ 0.8
SNAPC3-206ENST00000490969 TLR1Q15399 786 aa20.03■□□□□ 0.8
SNAPC3-206ENST00000490969 ACBD5Q5T8D3 534 aaPredicted RBP20.03■□□□□ 0.8
SNAPC3-206ENST00000490969 MARVELD2Q8N4S9 558 aa20.03■□□□□ 0.8
SNAPC3-206ENST00000490969 DCPSQ96C86 337 aaKnown RBP20.03■□□□□ 0.8
SNAPC3-206ENST00000490969 ITGA11Q9UKX5 1188 aa20.03■□□□□ 0.8
SNAPC3-206ENST00000490969 BIRC5O15392 142 aa20.02■□□□□ 0.8
SNAPC3-206ENST00000490969 CD48P09326 243 aa20.02■□□□□ 0.8
SNAPC3-206ENST00000490969 RBP3P10745 1247 aa20.02■□□□□ 0.8
SNAPC3-206ENST00000490969 DESP17661 470 aa20.02■□□□□ 0.8
SNAPC3-206ENST00000490969 HSD17B4P51659 736 aa20.02■□□□□ 0.8
SNAPC3-206ENST00000490969 SNAPC2Q13487 334 aa20.02■□□□□ 0.8
SNAPC3-206ENST00000490969 MTMR1Q13613 665 aa20.02■□□□□ 0.8
SNAPC3-206ENST00000490969 KCNJ11Q14654 390 aa20.02■□□□□ 0.8
SNAPC3-206ENST00000490969 SUPT20HL1Q3ZLR7 823 aa20.02■□□□□ 0.8
SNAPC3-206ENST00000490969 C1orf228Q6PIY5 440 aa20.02■□□□□ 0.8
SNAPC3-206ENST00000490969 WDR75Q8IWA0 830 aaKnown RBP20.02■□□□□ 0.8
SNAPC3-206ENST00000490969 THNSL1Q8IYQ7 743 aa20.02■□□□□ 0.8
SNAPC3-206ENST00000490969 CCDC33Q8N5R6 958 aa20.02■□□□□ 0.8
SNAPC3-206ENST00000490969 SIKE1Q9BRV8 207 aa20.02■□□□□ 0.8
SNAPC3-206ENST00000490969 CYP4F11Q9HBI6 524 aa20.02■□□□□ 0.8
SNAPC3-206ENST00000490969 SLC9A2Q9UBY0 812 aa20.02■□□□□ 0.8
SNAPC3-206ENST00000490969 DTNAQ9Y4J8 743 aa20.02■□□□□ 0.8
SNAPC3-206ENST00000490969 CCDC160A6NGH7 325 aa20.02■□□□□ 0.79
SNAPC3-206ENST00000490969 CAPN8A6NHC0 703 aa20.02■□□□□ 0.79
SNAPC3-206ENST00000490969 H3BNX3 289 aa20.02■□□□□ 0.79
SNAPC3-206ENST00000490969 MCF2LO15068 1137 aa20.02■□□□□ 0.79
SNAPC3-206ENST00000490969 KRT7P08729 469 aa20.02■□□□□ 0.79
SNAPC3-206ENST00000490969 PSMA2P25787 234 aa20.02■□□□□ 0.79
SNAPC3-206ENST00000490969 NLRP11P59045 1033 aaKnown RBP20.02■□□□□ 0.79
SNAPC3-206ENST00000490969 TAZQ16635 292 aa20.02■□□□□ 0.79
SNAPC3-206ENST00000490969 CYP4A22Q5TCH4 519 aa20.02■□□□□ 0.79
SNAPC3-206ENST00000490969 ANO5Q75V66 913 aa20.02■□□□□ 0.79
SNAPC3-206ENST00000490969 SULF1Q8IWU6 871 aa20.02■□□□□ 0.79
SNAPC3-206ENST00000490969 APBB2Q92870 758 aa20.02■□□□□ 0.79
SNAPC3-206ENST00000490969 TBC1D22BQ9NU19 505 aa20.02■□□□□ 0.79
SNAPC3-206ENST00000490969 INPP5FQ9Y2H2 1132 aa20.02■□□□□ 0.79
SNAPC3-206ENST00000490969 UBIAD1Q9Y5Z9 338 aa20.02■□□□□ 0.79
SNAPC3-206ENST00000490969 OTOFQ9HC10 1997 aa20.01■□□□□ 0.79
SNAPC3-206ENST00000490969 A0A0J9YVX5 310 aa20.01■□□□□ 0.79
SNAPC3-206ENST00000490969 DENRO43583 198 aaKnown RBP20.01■□□□□ 0.79
SNAPC3-206ENST00000490969 LSM8O95777 96 aaKnown RBP20.01■□□□□ 0.79
SNAPC3-206ENST00000490969 MAGEA8P43361 318 aa20.01■□□□□ 0.79
SNAPC3-206ENST00000490969 ACOT2P49753 483 aa20.01■□□□□ 0.79
SNAPC3-206ENST00000490969 ZNF132P52740 706 aa20.01■□□□□ 0.79
SNAPC3-206ENST00000490969 NADK2Q4G0N4 442 aa20.01■□□□□ 0.79
SNAPC3-206ENST00000490969 OGFRL1Q5TC84 451 aaPredicted RBP20.01■□□□□ 0.79
SNAPC3-206ENST00000490969 ARCQ7LC44 396 aa20.01■□□□□ 0.79
SNAPC3-206ENST00000490969 TAS1R3Q7RTX0 852 aa20.01■□□□□ 0.79
SNAPC3-206ENST00000490969 RFX6Q8HWS3 928 aa20.01■□□□□ 0.79
SNAPC3-206ENST00000490969 METTL25Q8N6Q8 603 aa20.01■□□□□ 0.79
SNAPC3-206ENST00000490969 REPS2Q8NFH8 660 aa20.01■□□□□ 0.79
SNAPC3-206ENST00000490969 CATSPER2Q96P56 530 aa20.01■□□□□ 0.79
SNAPC3-206ENST00000490969 DDX18Q9NVP1 670 aaKnown RBP20.01■□□□□ 0.79
SNAPC3-206ENST00000490969 APOBEC2Q9Y235 224 aaKnown RBP20.01■□□□□ 0.79
SNAPC3-206ENST00000490969 PPP2R3BQ9Y5P8 575 aa20.01■□□□□ 0.79
SNAPC3-206ENST00000490969 APOC4-APOC2K7ER74 178 aa20.01■□□□□ 0.79
SNAPC3-206ENST00000490969 UGT1A9O60656 530 aa20.01■□□□□ 0.79
SNAPC3-206ENST00000490969 SIN3BO75182 1162 aa20.01■□□□□ 0.79
SNAPC3-206ENST00000490969 LRCH4O75427 683 aa20.01■□□□□ 0.79
SNAPC3-206ENST00000490969 APOC2P02655 101 aa20.01■□□□□ 0.79
SNAPC3-206ENST00000490969 PMLP29590 882 aa20.01■□□□□ 0.79
SNAPC3-206ENST00000490969 L1CAMP32004 1257 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms