RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 NENFQ9UMX5 172 aa16.56■□□□□ 0.24
TRA2A-208ENST00000490942 SORCS3Q9UPU3 1222 aa16.56■□□□□ 0.24
TRA2A-208ENST00000490942 MYO16Q9Y6X6 1858 aa16.56■□□□□ 0.24
TRA2A-208ENST00000490942 E2F8A0AVK6 867 aa16.55■□□□□ 0.24
TRA2A-208ENST00000490942 HEPACAM2A8MVW5 462 aa16.55■□□□□ 0.24
TRA2A-208ENST00000490942 CAPN9O14815 690 aa16.55■□□□□ 0.24
TRA2A-208ENST00000490942 DAB1O75553 588 aa16.55■□□□□ 0.24
TRA2A-208ENST00000490942 NCAM1P13591 858 aa16.55■□□□□ 0.24
TRA2A-208ENST00000490942 SP100P23497 879 aaPredicted RBP16.55■□□□□ 0.24
TRA2A-208ENST00000490942 NOS2P35228 1153 aa16.55■□□□□ 0.24
TRA2A-208ENST00000490942 EIF4A3P38919 411 aaKnown RBP16.55■□□□□ 0.24
TRA2A-208ENST00000490942 ARHGAP29Q52LW3 1261 aa16.55■□□□□ 0.24
TRA2A-208ENST00000490942 HFE2Q6ZVN8 426 aa16.55■□□□□ 0.24
TRA2A-208ENST00000490942 RNF135Q8IUD6 432 aa16.55■□□□□ 0.24
TRA2A-208ENST00000490942 UBALD2Q8IYN6 164 aa16.55■□□□□ 0.24
TRA2A-208ENST00000490942 CCDC170Q8IYT3 715 aa16.55■□□□□ 0.24
TRA2A-208ENST00000490942 SLC44A3Q8N4M1 653 aa16.55■□□□□ 0.24
TRA2A-208ENST00000490942 NDRG1Q92597 394 aaKnown RBP16.55■□□□□ 0.24
TRA2A-208ENST00000490942 CCDC42Q96M95 316 aa16.55■□□□□ 0.24
TRA2A-208ENST00000490942 SERPINB11Q96P15 392 aa16.55■□□□□ 0.24
TRA2A-208ENST00000490942 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.55■□□□□ 0.24
TRA2A-208ENST00000490942 SLC2A4RGQ9NR83 387 aa16.55■□□□□ 0.24
TRA2A-208ENST00000490942 MARCH2Q9P0N8 246 aa16.55■□□□□ 0.24
TRA2A-208ENST00000490942 TMEM59LQ9UK28 342 aa16.55■□□□□ 0.24
TRA2A-208ENST00000490942 STAP1Q9ULZ2 295 aa16.55■□□□□ 0.24
TRA2A-208ENST00000490942 CPQQ9Y646 472 aa16.55■□□□□ 0.24
TRA2A-208ENST00000490942 A0A087X0T9 212 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 TCRBV5S1A1TA0A578 114 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 LEFTY2O00292 366 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 SLC9A3R1O14745 358 aaPredicted RBP16.54■□□□□ 0.24
TRA2A-208ENST00000490942 CHADO15335 359 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 IGLV3-25P01717 112 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 FTLP02792 175 aaPredicted RBP16.54■□□□□ 0.24
TRA2A-208ENST00000490942 PLEKP08567 350 aaPredicted RBP16.54■□□□□ 0.24
TRA2A-208ENST00000490942 FAM228BP0C875 321 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 VIPR2P41587 438 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 MATKP42679 507 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 RING1Q06587 406 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 C10orf76Q5T2E6 689 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 FAM102AQ5T9C2 384 aaPredicted RBP16.54■□□□□ 0.24
TRA2A-208ENST00000490942 ALKBH5Q6P6C2 394 aaKnown RBP16.54■□□□□ 0.24
TRA2A-208ENST00000490942 VITQ6UXI7 678 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 HTR3DQ70Z44 454 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 TMTC1Q8IUR5 882 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 SH3RF2Q8TEC5 729 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 EDEM1Q92611 657 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 DNASE1L2Q92874 299 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 NT5C3BQ969T7 300 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 PLD4Q96BZ4 506 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 OTUB2Q96DC9 234 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 RSPRY1Q96DX4 576 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 PIWIL1Q96J94 861 aaKnown RBP16.54■□□□□ 0.24
TRA2A-208ENST00000490942 TRMT61BQ9BVS5 477 aaKnown RBP16.54■□□□□ 0.24
TRA2A-208ENST00000490942 DCLK3Q9C098 648 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 DEF6Q9H4E7 631 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 NHEJ1Q9H9Q4 299 aaPredicted RBP16.54■□□□□ 0.24
TRA2A-208ENST00000490942 TBC1D14Q9P2M4 693 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 CCL26Q9Y258 94 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 ZNF510Q9Y2H8 683 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 TTC28Q96AY4 2481 aa16.54■□□□□ 0.24
TRA2A-208ENST00000490942 SIGLEC16A6NMB1 481 aa16.53■□□□□ 0.24
TRA2A-208ENST00000490942 AKR1B10O60218 316 aa16.53■□□□□ 0.24
TRA2A-208ENST00000490942 LATS1O95835 1130 aa16.53■□□□□ 0.24
TRA2A-208ENST00000490942 TBX18O95935 607 aa16.53■□□□□ 0.24
TRA2A-208ENST00000490942 SRFP11831 508 aa16.53■□□□□ 0.24
TRA2A-208ENST00000490942 MLLT6P55198 1093 aaPredicted RBP16.53■□□□□ 0.24
TRA2A-208ENST00000490942 PFKPQ01813 784 aa16.53■□□□□ 0.24
TRA2A-208ENST00000490942 EFEMP1Q12805 493 aa16.53■□□□□ 0.24
TRA2A-208ENST00000490942 EIF4EBP2Q13542 120 aaPredicted RBP16.53■□□□□ 0.24
TRA2A-208ENST00000490942 GSE1Q14687 1217 aa16.53■□□□□ 0.24
TRA2A-208ENST00000490942 MTF1Q14872 753 aa16.53■□□□□ 0.24
TRA2A-208ENST00000490942 PDGFRLQ15198 375 aa16.53■□□□□ 0.24
TRA2A-208ENST00000490942 PLEKHA7Q6IQ23 1121 aa16.53■□□□□ 0.24
TRA2A-208ENST00000490942 CC2D1AQ6P1N0 951 aaPredicted RBP16.53■□□□□ 0.24
TRA2A-208ENST00000490942 YAF2Q8IY57 180 aa16.53■□□□□ 0.24
TRA2A-208ENST00000490942 DEFB106AQ8N104 65 aa16.53■□□□□ 0.24
TRA2A-208ENST00000490942 DQX1Q8TE96 717 aaKnown RBP16.53■□□□□ 0.24
TRA2A-208ENST00000490942 IRF7Q92985 503 aa16.53■□□□□ 0.24
TRA2A-208ENST00000490942 AZIN2Q96A70 460 aa16.53■□□□□ 0.24
TRA2A-208ENST00000490942 PGAP3Q96FM1 320 aaPredicted RBP16.53■□□□□ 0.24
TRA2A-208ENST00000490942 CHP1Q99653 195 aa16.53■□□□□ 0.24
TRA2A-208ENST00000490942 KXD1Q9BQD3 176 aa16.53■□□□□ 0.24
TRA2A-208ENST00000490942 IRX2Q9BZI1 471 aaPredicted RBP16.53■□□□□ 0.24
TRA2A-208ENST00000490942 PARVAQ9NVD7 372 aa16.53■□□□□ 0.24
TRA2A-208ENST00000490942 TAS2R14Q9NYV8 317 aa16.53■□□□□ 0.24
TRA2A-208ENST00000490942 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.53■□□□□ 0.244e-10■□□□□ 10.1
TRA2A-208ENST00000490942 LSM7Q9UK45 103 aaKnown RBP16.53■□□□□ 0.24
TRA2A-208ENST00000490942 DUSP12Q9UNI6 340 aa16.53■□□□□ 0.24
TRA2A-208ENST00000490942 NAALADL1Q9UQQ1 740 aa16.53■□□□□ 0.24
TRA2A-208ENST00000490942 ANKRD62A6NC57 917 aa16.52■□□□□ 0.24
TRA2A-208ENST00000490942 LCA5LO95447 670 aa16.52■□□□□ 0.24
TRA2A-208ENST00000490942 F9P00740 461 aa16.52■□□□□ 0.24
TRA2A-208ENST00000490942 IGLV3-27P01718 113 aa16.52■□□□□ 0.24
TRA2A-208ENST00000490942 KRT3P12035 628 aa16.52■□□□□ 0.24
TRA2A-208ENST00000490942 GBP1P32455 592 aa16.52■□□□□ 0.24
TRA2A-208ENST00000490942 ZXDBP98169 803 aa16.52■□□□□ 0.24
TRA2A-208ENST00000490942 TAF5Q15542 800 aa16.52■□□□□ 0.24
TRA2A-208ENST00000490942 TRIP4Q15650 581 aaPredicted RBP16.52■□□□□ 0.24
TRA2A-208ENST00000490942 DCAF6Q58WW2 860 aa16.52■□□□□ 0.24
TRA2A-208ENST00000490942 PPP1R15BQ5SWA1 713 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms