RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 CEP63Q96MT8 703 aa9.61□□□□□ -0.87
SRRM1-217ENST00000490543 BBC3Q96PG8 261 aaPredicted RBP9.61□□□□□ -0.87
SRRM1-217ENST00000490543 PNKPQ96T60 521 aa9.61□□□□□ -0.87
SRRM1-217ENST00000490543 SLC30A3Q99726 388 aa9.61□□□□□ -0.87
SRRM1-217ENST00000490543 ZHX3Q9H4I2 956 aa9.61□□□□□ -0.87
SRRM1-217ENST00000490543 SUV39H2Q9H5I1 410 aa9.61□□□□□ -0.87
SRRM1-217ENST00000490543 PARVGQ9HBI0 331 aa9.61□□□□□ -0.87
SRRM1-217ENST00000490543 CAPN10Q9HC96 672 aa9.61□□□□□ -0.87
SRRM1-217ENST00000490543 BRD7Q9NPI1 651 aa9.61□□□□□ -0.87
SRRM1-217ENST00000490543 BLOC1S4Q9NUP1 217 aa9.61□□□□□ -0.87
SRRM1-217ENST00000490543 BCCIPQ9P287 314 aaKnown RBP eCLIP9.61□□□□□ -0.87
SRRM1-217ENST00000490543 AGO2Q9UKV8 859 aaKnown RBP9.61□□□□□ -0.87
SRRM1-217ENST00000490543 SLC6A14Q9UN76 642 aa9.61□□□□□ -0.87
SRRM1-217ENST00000490543 LIMCH1Q9UPQ0 1083 aa9.61□□□□□ -0.87
SRRM1-217ENST00000490543 AGAP1Q9UPQ3 857 aa9.61□□□□□ -0.87
SRRM1-217ENST00000490543 STYXL1Q9Y6J8 313 aa9.61□□□□□ -0.87
SRRM1-217ENST00000490543 KNL1Q8NG31 2342 aa9.6□□□□□ -0.87
SRRM1-217ENST00000490543 A0A0A0MRY4 1105 aa9.6□□□□□ -0.87
SRRM1-217ENST00000490543 TCRBV21S2A2A0A5A6 115 aa9.6□□□□□ -0.87
SRRM1-217ENST00000490543 MYMKA6NI61 221 aa9.6□□□□□ -0.87
SRRM1-217ENST00000490543 H0Y626 953 aa9.6□□□□□ -0.87
SRRM1-217ENST00000490543 SH3BP5O60239 455 aa9.6□□□□□ -0.87
SRRM1-217ENST00000490543 OPHN1O60890 802 aa9.6□□□□□ -0.87
SRRM1-217ENST00000490543 TRIM16O95361 564 aa9.6□□□□□ -0.87
SRRM1-217ENST00000490543 ITGB3P05106 788 aa9.6□□□□□ -0.87
SRRM1-217ENST00000490543 SERPINF2P08697 491 aa9.6□□□□□ -0.87
SRRM1-217ENST00000490543 PLCG1P19174 1290 aa9.6□□□□□ -0.87
SRRM1-217ENST00000490543 ATXN3P54252 364 aaPredicted RBP9.6□□□□□ -0.87
SRRM1-217ENST00000490543 TFAMQ00059 246 aaKnown RBP9.6□□□□□ -0.87
SRRM1-217ENST00000490543 KDSRQ06136 332 aa9.6□□□□□ -0.87
SRRM1-217ENST00000490543 DUOXA1Q1HG43 343 aa9.6□□□□□ -0.87
SRRM1-217ENST00000490543 CFAP221Q4G0U5 840 aa9.6□□□□□ -0.87
SRRM1-217ENST00000490543 SPDYCQ5MJ68 293 aa9.6□□□□□ -0.87
SRRM1-217ENST00000490543 SPATA2LQ8IUW3 424 aaPredicted RBP9.6□□□□□ -0.87
SRRM1-217ENST00000490543 C1orf127Q8N9H9 656 aa9.6□□□□□ -0.87
SRRM1-217ENST00000490543 FSIP1Q8NA03 581 aa9.6□□□□□ -0.87
SRRM1-217ENST00000490543 FAM184AQ8NB25 1140 aa9.6□□□□□ -0.87
SRRM1-217ENST00000490543 SPATA18Q8TC71 538 aa9.6□□□□□ -0.87
SRRM1-217ENST00000490543 SMPD4Q9NXE4 827 aa9.6□□□□□ -0.87
SRRM1-217ENST00000490543 SMG1Q96Q15 3661 aaKnown RBP9.6□□□□□ -0.87
SRRM1-217ENST00000490543 PCDH15Q96QU1 1955 aa9.6□□□□□ -0.87
SRRM1-217ENST00000490543 CEP192Q8TEP8 1941 aa9.6□□□□□ -0.87
SRRM1-217ENST00000490543 PLXNB3Q9ULL4 1909 aa9.6□□□□□ -0.87
SRRM1-217ENST00000490543 LOC400499M0QZD8 3231 aa9.6□□□□□ -0.87
SRRM1-217ENST00000490543 CELSR3Q9NYQ7 3312 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 GOLGA4Q13439 2230 aaKnown RBP9.59□□□□□ -0.87
SRRM1-217ENST00000490543 ZNF840PA6NDX5 716 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 GABRDO14764 452 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 GNB5O14775 395 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 HUS1O60921 280 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 APODP05090 189 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 LMO2P25791 158 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 RDXP35241 583 aaKnown RBP9.59□□□□□ -0.87
SRRM1-217ENST00000490543 PNPLA4P41247 253 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 HMGN5P82970 282 aaKnown RBP9.59□□□□□ -0.87
SRRM1-217ENST00000490543 MYL7Q01449 175 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 RPL6Q02878 288 aaKnown RBP9.59□□□□□ -0.87
SRRM1-217ENST00000490543 TYRO3Q06418 890 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 ZNF33AQ06730 810 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 KCNA1Q09470 495 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 TRIP6Q15654 476 aaKnown RBP9.59□□□□□ -0.87
SRRM1-217ENST00000490543 ZNF423Q2M1K9 1284 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 SOWAHAQ2M3V2 549 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 EOGTQ5NDL2 527 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 SLFN12LQ6IEE8 588 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 FAM171BQ6P995 826 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 SLC41A1Q8IVJ1 513 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 MDM1Q8TC05 714 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 HNRNPLLQ8WVV9 542 aaKnown RBP9.59□□□□□ -0.87
SRRM1-217ENST00000490543 COL26A1Q96A83 441 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 ERLEC1Q96DZ1 483 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 ZNF560Q96MR9 790 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 CRTAC1Q9NQ79 661 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 ARHGEF4Q9NR80 690 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 CFAP97Q9P2B7 532 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 SNX9Q9Y5X1 595 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 CPQQ9Y646 472 aa9.59□□□□□ -0.87
SRRM1-217ENST00000490543 HELZP42694 1942 aaKnown RBP9.58□□□□□ -0.88
SRRM1-217ENST00000490543 PLXND1Q9Y4D7 1925 aa9.58□□□□□ -0.88
SRRM1-217ENST00000490543 TRIM24O15164 1050 aa9.58□□□□□ -0.88
SRRM1-217ENST00000490543 AP5Z1O43299 807 aa9.58□□□□□ -0.88
SRRM1-217ENST00000490543 GJB3O75712 270 aa9.58□□□□□ -0.88
SRRM1-217ENST00000490543 IL18RAPO95256 599 aa9.58□□□□□ -0.88
SRRM1-217ENST00000490543 ABL1P00519 1130 aa9.58□□□□□ -0.88
SRRM1-217ENST00000490543 KRT18P05783 430 aaKnown RBP9.58□□□□□ -0.88
SRRM1-217ENST00000490543 FTH1P19P0C7X4 201 aa9.58□□□□□ -0.88
SRRM1-217ENST00000490543 GABRG2P18507 467 aa9.58□□□□□ -0.88
SRRM1-217ENST00000490543 SCP2P22307 547 aa9.58□□□□□ -0.88
SRRM1-217ENST00000490543 BDNFP23560 247 aa9.58□□□□□ -0.88
SRRM1-217ENST00000490543 HOXD12P35452 270 aa9.58□□□□□ -0.88
SRRM1-217ENST00000490543 GRIA2P42262 883 aa9.58□□□□□ -0.88
SRRM1-217ENST00000490543 WASP42768 502 aa9.58□□□□□ -0.88
SRRM1-217ENST00000490543 MAGEA11P43364 429 aa9.58□□□□□ -0.88
SRRM1-217ENST00000490543 PSMC1P62191 440 aaKnown RBP9.58□□□□□ -0.88
SRRM1-217ENST00000490543 SLC7A9P82251 487 aa9.58□□□□□ -0.88
SRRM1-217ENST00000490543 POU5F1Q01860 360 aaKnown RBP9.58□□□□□ -0.88
SRRM1-217ENST00000490543 RESTQ13127 1097 aa9.58□□□□□ -0.88
SRRM1-217ENST00000490543 BYSLQ13895 437 aaKnown RBP9.58□□□□□ -0.88
SRRM1-217ENST00000490543 HSF5Q4G112 596 aaPredicted RBP9.58□□□□□ -0.88
SRRM1-217ENST00000490543 LY6G5CQ5SRR4 150 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms