RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 FHL3Q13643 280 aa4.55□□□□□ -1.68
HMGN1-218ENST00000490032 CLEC9AQ6UXN8 241 aa4.55□□□□□ -1.68
HMGN1-218ENST00000490032 IRF2BP2Q7Z5L9 587 aa4.55□□□□□ -1.68
HMGN1-218ENST00000490032 KRT78Q8N1N4 520 aa4.55□□□□□ -1.68
HMGN1-218ENST00000490032 MBD3L2Q8NHZ7 208 aaPredicted RBP4.55□□□□□ -1.68
HMGN1-218ENST00000490032 VPS50Q96JG6 964 aa4.55□□□□□ -1.68
HMGN1-218ENST00000490032 VCPIP1Q96JH7 1222 aa4.55□□□□□ -1.68
HMGN1-218ENST00000490032 WACQ9BTA9 647 aa4.55□□□□□ -1.68
HMGN1-218ENST00000490032 UNKQ9C0B0 810 aaKnown RBP4.55□□□□□ -1.68
HMGN1-218ENST00000490032 PRDM11Q9NQV5 511 aa4.55□□□□□ -1.68
HMGN1-218ENST00000490032 ZNF212Q9UDV6 495 aa4.55□□□□□ -1.68
HMGN1-218ENST00000490032 HPSEQ9Y251 543 aa4.55□□□□□ -1.68
HMGN1-218ENST00000490032 SHROOM4Q9ULL8 1493 aa4.55□□□□□ -1.68
HMGN1-218ENST00000490032 F8W8V4 182 aa4.54□□□□□ -1.68
HMGN1-218ENST00000490032 TRIM38O00635 465 aa4.54□□□□□ -1.68
HMGN1-218ENST00000490032 FYB1O15117 783 aa4.54□□□□□ -1.68
HMGN1-218ENST00000490032 ANXA2P07355 339 aaKnown RBP4.54□□□□□ -1.68
HMGN1-218ENST00000490032 CTSAP10619 480 aa4.54□□□□□ -1.68
HMGN1-218ENST00000490032 TXNL4AP83876 142 aaKnown RBP4.54□□□□□ -1.68
HMGN1-218ENST00000490032 HSF1Q00613 529 aa4.54□□□□□ -1.68
HMGN1-218ENST00000490032 ID2Q02363 134 aa4.54□□□□□ -1.68
HMGN1-218ENST00000490032 MTAPQ13126 283 aa4.54□□□□□ -1.68
HMGN1-218ENST00000490032 TRIM71Q2Q1W2 868 aaKnown RBP4.54□□□□□ -1.68
HMGN1-218ENST00000490032 ZNF260Q3ZCT1 412 aa4.54□□□□□ -1.68
HMGN1-218ENST00000490032 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.54□□□□□ -1.68
HMGN1-218ENST00000490032 TTC8Q8TAM2 541 aa4.54□□□□□ -1.68
HMGN1-218ENST00000490032 BRIP1Q9BX63 1249 aa4.54□□□□□ -1.68
HMGN1-218ENST00000490032 KRTAP1-5Q9BYS1 174 aa4.54□□□□□ -1.68
HMGN1-218ENST00000490032 G3BP2Q9UN86 482 aaKnown RBP4.54□□□□□ -1.68
HMGN1-218ENST00000490032 FOXN3O00409 490 aaPredicted RBP4.53□□□□□ -1.68
HMGN1-218ENST00000490032 PRAMEF2O60811 474 aa4.53□□□□□ -1.68
HMGN1-218ENST00000490032 MBPP02686 304 aaPredicted RBP4.53□□□□□ -1.68
HMGN1-218ENST00000490032 TMEM225BP0DP42 221 aa4.53□□□□□ -1.68
HMGN1-218ENST00000490032 POLGP54098 1239 aaPredicted RBP4.53□□□□□ -1.68
HMGN1-218ENST00000490032 RPS13P62277 151 aaKnown RBP4.53□□□□□ -1.68
HMGN1-218ENST00000490032 ZNF91Q05481 1191 aa4.53□□□□□ -1.68
HMGN1-218ENST00000490032 DNASE1L3Q13609 305 aa4.53□□□□□ -1.68
HMGN1-218ENST00000490032 ACOX1Q15067 660 aa4.53□□□□□ -1.68
HMGN1-218ENST00000490032 CC2D1BQ5T0F9 858 aaKnown RBP4.53□□□□□ -1.68
HMGN1-218ENST00000490032 GRHL2Q6ISB3 625 aa4.53□□□□□ -1.68
HMGN1-218ENST00000490032 PPP4R4Q6NUP7 873 aa4.53□□□□□ -1.68
HMGN1-218ENST00000490032 ZNF517Q6ZMY9 492 aaPredicted RBP4.53□□□□□ -1.68
HMGN1-218ENST00000490032 KRT28Q7Z3Y7 464 aa4.53□□□□□ -1.68
HMGN1-218ENST00000490032 SUN3Q8TAQ9 357 aa4.53□□□□□ -1.68
HMGN1-218ENST00000490032 PHKBQ93100 1093 aa4.53□□□□□ -1.68
HMGN1-218ENST00000490032 TSR2Q969E8 191 aaKnown RBP4.53□□□□□ -1.68
HMGN1-218ENST00000490032 NUP62CLQ9H1M0 184 aa4.53□□□□□ -1.68
HMGN1-218ENST00000490032 USP29Q9HBJ7 922 aa4.53□□□□□ -1.68
HMGN1-218ENST00000490032 VPS45Q9NRW7 570 aa4.53□□□□□ -1.68
HMGN1-218ENST00000490032 TMEM184CQ9NVA4 438 aa4.53□□□□□ -1.68
HMGN1-218ENST00000490032 INSIG1O15503 277 aa4.52□□□□□ -1.69
HMGN1-218ENST00000490032 CA12O43570 354 aa4.52□□□□□ -1.69
HMGN1-218ENST00000490032 WDR47O94967 919 aa4.52□□□□□ -1.69
HMGN1-218ENST00000490032 TACR3P29371 465 aa4.52□□□□□ -1.69
HMGN1-218ENST00000490032 KRTAP10-9P60411 292 aa4.52□□□□□ -1.69
HMGN1-218ENST00000490032 YPEL5P62699 121 aa4.52□□□□□ -1.69
HMGN1-218ENST00000490032 CCDC15Q0P6D6 951 aa4.52□□□□□ -1.69
HMGN1-218ENST00000490032 FHL1Q13642 323 aa4.52□□□□□ -1.69
HMGN1-218ENST00000490032 DAG1Q14118 895 aa4.52□□□□□ -1.69
HMGN1-218ENST00000490032 RNF44Q7L0R7 432 aa4.52□□□□□ -1.69
HMGN1-218ENST00000490032 C14orf80Q86SX3 495 aa4.52□□□□□ -1.69
HMGN1-218ENST00000490032 C16orf71Q8IYS4 520 aaPredicted RBP4.52□□□□□ -1.69
HMGN1-218ENST00000490032 FAM71DQ8N9W8 422 aa4.52□□□□□ -1.69
HMGN1-218ENST00000490032 WIPF2Q8TF74 440 aaPredicted RBP4.52□□□□□ -1.69
HMGN1-218ENST00000490032 CINPQ9BW66 212 aaPredicted RBP4.52□□□□□ -1.69
HMGN1-218ENST00000490032 DDX21Q9NR30 783 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGN1-218ENST00000490032 TBC1D23Q9NUY8 699 aa4.52□□□□□ -1.69
HMGN1-218ENST00000490032 PCDHGB6Q9Y5F9 930 aa4.52□□□□□ -1.69
HMGN1-218ENST00000490032 A0A087WZ62 844 aa4.51□□□□□ -1.69
HMGN1-218ENST00000490032 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.51□□□□□ -1.69
HMGN1-218ENST00000490032 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.51□□□□□ -1.69
HMGN1-218ENST00000490032 MYMKA6NI61 221 aa4.51□□□□□ -1.69
HMGN1-218ENST00000490032 IKBKBO14920 756 aa4.51□□□□□ -1.69
HMGN1-218ENST00000490032 CBFA2T3O75081 653 aa4.51□□□□□ -1.69
HMGN1-218ENST00000490032 IL18RAPO95256 599 aa4.51□□□□□ -1.69
HMGN1-218ENST00000490032 LINC00205P59089 165 aa4.51□□□□□ -1.69
HMGN1-218ENST00000490032 PFKFB3Q16875 520 aaPredicted RBP4.51□□□□□ -1.69
HMGN1-218ENST00000490032 AASDHQ4L235 1098 aaPredicted RBP4.51□□□□□ -1.69
HMGN1-218ENST00000490032 ANKRD13BQ86YJ7 626 aa4.51□□□□□ -1.69
HMGN1-218ENST00000490032 FSTL5Q8N475 847 aaPredicted RBP4.51□□□□□ -1.69
HMGN1-218ENST00000490032 P2RY11Q96G91 374 aa4.51□□□□□ -1.69
HMGN1-218ENST00000490032 PRR11Q96HE9 360 aaPredicted RBP4.51□□□□□ -1.69
HMGN1-218ENST00000490032 ZFYVE19Q96K21 471 aa4.51□□□□□ -1.69
HMGN1-218ENST00000490032 WDR24Q96S15 920 aa4.51□□□□□ -1.69
HMGN1-218ENST00000490032 ADGRE3Q9BY15 652 aa4.51□□□□□ -1.69
HMGN1-218ENST00000490032 NUAK2Q9H093 628 aa4.51□□□□□ -1.69
HMGN1-218ENST00000490032 SLC25A32Q9H2D1 315 aa4.51□□□□□ -1.69
HMGN1-218ENST00000490032 SAP30LQ9HAJ7 183 aa4.51□□□□□ -1.69
HMGN1-218ENST00000490032 AS3MTQ9HBK9 375 aa4.51□□□□□ -1.69
HMGN1-218ENST00000490032 HEYLQ9NQ87 328 aaPredicted RBP4.51□□□□□ -1.69
HMGN1-218ENST00000490032 HEY2Q9UBP5 337 aa4.51□□□□□ -1.69
HMGN1-218ENST00000490032 CLCA1A8K7I4 914 aa4.5□□□□□ -1.69
HMGN1-218ENST00000490032 AREL1O15033 823 aa4.5□□□□□ -1.69
HMGN1-218ENST00000490032 THAP12O43422 761 aa4.5□□□□□ -1.69
HMGN1-218ENST00000490032 TMIGD3P0DMS9 266 aaPredicted RBP4.5□□□□□ -1.69
HMGN1-218ENST00000490032 GALNSP34059 522 aa4.5□□□□□ -1.69
HMGN1-218ENST00000490032 JAK3P52333 1124 aa4.5□□□□□ -1.69
HMGN1-218ENST00000490032 DGKQP52824 942 aa4.5□□□□□ -1.69
HMGN1-218ENST00000490032 KCNJ12Q14500 433 aa4.5□□□□□ -1.69
HMGN1-218ENST00000490032 FAM110CQ1W6H9 321 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms