RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 KCNJ12Q14500 433 aa6.55□□□□□ -1.36
VPS26A-206ENST00000489794 CLASRPQ8N2M8 674 aaKnown RBP6.55□□□□□ -1.36
VPS26A-206ENST00000489794 GPR150Q8NGU9 434 aa6.55□□□□□ -1.36
VPS26A-206ENST00000489794 DAZAP1Q96EP5 407 aaKnown RBP6.55□□□□□ -1.36
VPS26A-206ENST00000489794 LENG8Q96PV6 779 aaPredicted RBP6.55□□□□□ -1.36
VPS26A-206ENST00000489794 EIF3CQ99613 913 aaKnown RBP6.55□□□□□ -1.36
VPS26A-206ENST00000489794 MRIQ9BWK5 157 aa6.55□□□□□ -1.36
VPS26A-206ENST00000489794 TP63Q9H3D4 680 aaPredicted RBP6.55□□□□□ -1.36
VPS26A-206ENST00000489794 SYNPO2LQ9H987 977 aa6.55□□□□□ -1.36
VPS26A-206ENST00000489794 CPNE5Q9HCH3 593 aa6.55□□□□□ -1.36
VPS26A-206ENST00000489794 SEMA4GQ9NTN9 838 aa6.55□□□□□ -1.36
VPS26A-206ENST00000489794 IGSF9Q9P2J2 1179 aa6.55□□□□□ -1.36
VPS26A-206ENST00000489794 ZNHIT2Q9UHR6 403 aa6.55□□□□□ -1.36
VPS26A-206ENST00000489794 FNDC1Q4ZHG4 1894 aaPredicted RBP6.55□□□□□ -1.36
VPS26A-206ENST00000489794 PNMA6EA0A0J9YXQ4 647 aa6.54□□□□□ -1.36
VPS26A-206ENST00000489794 LGALS16A8MUM7 142 aa6.54□□□□□ -1.36
VPS26A-206ENST00000489794 HNRNPCP07910 306 aaKnown RBP eCLIP6.54□□□□□ -1.36
VPS26A-206ENST00000489794 SERPINF1P36955 418 aa6.54□□□□□ -1.36
VPS26A-206ENST00000489794 GSTM5P46439 218 aa6.54□□□□□ -1.36
VPS26A-206ENST00000489794 DIO1P49895 249 aa6.54□□□□□ -1.36
VPS26A-206ENST00000489794 HMGA2P52926 109 aa6.54□□□□□ -1.36
VPS26A-206ENST00000489794 HOXA4Q00056 320 aaPredicted RBP6.54□□□□□ -1.36
VPS26A-206ENST00000489794 COL10A1Q03692 680 aa6.54□□□□□ -1.36
VPS26A-206ENST00000489794 FHL3Q13643 280 aa6.54□□□□□ -1.36
VPS26A-206ENST00000489794 TRIM14Q14142 442 aa6.54□□□□□ -1.36
VPS26A-206ENST00000489794 SUMO4Q6EEV6 95 aa6.54□□□□□ -1.36
VPS26A-206ENST00000489794 P3H2Q8IVL5 708 aa6.54□□□□□ -1.36
VPS26A-206ENST00000489794 SMC5Q8IY18 1101 aa6.54□□□□□ -1.36
VPS26A-206ENST00000489794 SNX18Q96RF0 628 aa6.54□□□□□ -1.36
VPS26A-206ENST00000489794 KATNAL1Q9BW62 490 aa6.54□□□□□ -1.36
VPS26A-206ENST00000489794 AGO4Q9HCK5 861 aaKnown RBP6.54□□□□□ -1.36
VPS26A-206ENST00000489794 GAR1Q9NY12 217 aaKnown RBP6.54□□□□□ -1.36
VPS26A-206ENST00000489794 DACT1Q9NYF0 836 aa6.54□□□□□ -1.36
VPS26A-206ENST00000489794 HERC5Q9UII4 1024 aaKnown RBP6.54□□□□□ -1.36
VPS26A-206ENST00000489794 J3KTA2 159 aa6.53□□□□□ -1.36
VPS26A-206ENST00000489794 ANXA6P08133 673 aa6.53□□□□□ -1.36
VPS26A-206ENST00000489794 TRAPPC10P48553 1259 aa6.53□□□□□ -1.36
VPS26A-206ENST00000489794 AASDHQ4L235 1098 aaPredicted RBP6.53□□□□□ -1.36
VPS26A-206ENST00000489794 GGT6Q6P531 493 aa6.53□□□□□ -1.36
VPS26A-206ENST00000489794 TRIM72Q6ZMU5 477 aa6.53□□□□□ -1.36
VPS26A-206ENST00000489794 CACNA2D3Q8IZS8 1091 aa6.53□□□□□ -1.36
VPS26A-206ENST00000489794 TERB1Q8NA31 727 aa6.53□□□□□ -1.36
VPS26A-206ENST00000489794 FYTTD1Q96QD9 318 aaKnown RBP6.53□□□□□ -1.36
VPS26A-206ENST00000489794 HERPUD2Q9BSE4 406 aa6.53□□□□□ -1.36
VPS26A-206ENST00000489794 KLK15Q9H2R5 256 aa6.53□□□□□ -1.36
VPS26A-206ENST00000489794 RIOX1Q9H6W3 641 aa6.53□□□□□ -1.36
VPS26A-206ENST00000489794 ARID4BQ4LE39 1312 aaPredicted RBP6.52□□□□□ -1.37
VPS26A-206ENST00000489794 TARM1B6A8C7 271 aa6.52□□□□□ -1.37
VPS26A-206ENST00000489794 BTBD19C9JJ37 291 aa6.52□□□□□ -1.37
VPS26A-206ENST00000489794 ZNF213O14771 459 aa6.52□□□□□ -1.37
VPS26A-206ENST00000489794 PCDH17O14917 1159 aa6.52□□□□□ -1.37
VPS26A-206ENST00000489794 ASNA1O43681 348 aa6.52□□□□□ -1.37
VPS26A-206ENST00000489794 MCM5P33992 734 aa6.52□□□□□ -1.37
VPS26A-206ENST00000489794 GRK6P43250 576 aa6.52□□□□□ -1.37
VPS26A-206ENST00000489794 CFHR3Q02985 330 aa6.52□□□□□ -1.37
VPS26A-206ENST00000489794 GALNT1Q10472 559 aaPredicted RBP6.52□□□□□ -1.37
VPS26A-206ENST00000489794 LMAN2Q12907 356 aa6.52□□□□□ -1.37
VPS26A-206ENST00000489794 SEMA3BQ13214 749 aa6.52□□□□□ -1.37
VPS26A-206ENST00000489794 DNASE1L3Q13609 305 aa6.52□□□□□ -1.37
VPS26A-206ENST00000489794 TMEM196Q5HYL7 178 aa6.52□□□□□ -1.37
VPS26A-206ENST00000489794 GORABQ5T7V8 394 aa6.52□□□□□ -1.37
VPS26A-206ENST00000489794 ATPAF1Q5TC12 328 aaPredicted RBP6.52□□□□□ -1.37
VPS26A-206ENST00000489794 FAM90A2PQ658T7 463 aa6.52□□□□□ -1.37
VPS26A-206ENST00000489794 ERAP2Q6P179 960 aa6.52□□□□□ -1.37
VPS26A-206ENST00000489794 C12orf76Q8N812 135 aaPredicted RBP6.52□□□□□ -1.37
VPS26A-206ENST00000489794 FAM71DQ8N9W8 422 aa6.52□□□□□ -1.37
VPS26A-206ENST00000489794 ATG16L2Q8NAA4 619 aa6.52□□□□□ -1.37
VPS26A-206ENST00000489794 SPATA5Q8NB90 893 aa6.52□□□□□ -1.37
VPS26A-206ENST00000489794 PAAF1Q9BRP4 392 aa6.52□□□□□ -1.37
VPS26A-206ENST00000489794 CIPCQ9C0C6 399 aa6.52□□□□□ -1.37
VPS26A-206ENST00000489794 MYH16Q9H6N6 1097 aa6.52□□□□□ -1.37
VPS26A-206ENST00000489794 PTPRHQ9HD43 1115 aa6.52□□□□□ -1.37
VPS26A-206ENST00000489794 LRFN1Q9P244 771 aa6.52□□□□□ -1.37
VPS26A-206ENST00000489794 ARPP21Q9UBL0 812 aaPredicted RBP6.52□□□□□ -1.37
VPS26A-206ENST00000489794 AQP12BA6NM10 295 aa6.51□□□□□ -1.37
VPS26A-206ENST00000489794 UBE2Q2LH0YL09 131 aa6.51□□□□□ -1.37
VPS26A-206ENST00000489794 DHHO43323 396 aa6.51□□□□□ -1.37
VPS26A-206ENST00000489794 SUV39H1O43463 412 aa6.51□□□□□ -1.37
VPS26A-206ENST00000489794 DRD1P21728 446 aa6.51□□□□□ -1.37
VPS26A-206ENST00000489794 MATN1P21941 496 aa6.51□□□□□ -1.37
VPS26A-206ENST00000489794 CHKAP35790 457 aa6.51□□□□□ -1.37
VPS26A-206ENST00000489794 PBX1P40424 430 aa6.51□□□□□ -1.37
VPS26A-206ENST00000489794 CCDC15Q0P6D6 951 aa6.51□□□□□ -1.37
VPS26A-206ENST00000489794 CBFBQ13951 182 aa6.51□□□□□ -1.37
VPS26A-206ENST00000489794 P3H1Q32P28 736 aa6.51□□□□□ -1.37
VPS26A-206ENST00000489794 RNASE12Q5GAN4 147 aaKnown RBP6.51□□□□□ -1.37
VPS26A-206ENST00000489794 CCDC144NLQ6NUI1 221 aa6.51□□□□□ -1.37
VPS26A-206ENST00000489794 KIRREL2Q6UWL6 708 aa6.51□□□□□ -1.37
VPS26A-206ENST00000489794 NAPRTQ6XQN6 538 aa6.51□□□□□ -1.37
VPS26A-206ENST00000489794 LINC01465Q8N7H1 131 aa6.51□□□□□ -1.37
VPS26A-206ENST00000489794 TRAPPC12Q8WVT3 735 aa6.51□□□□□ -1.37
VPS26A-206ENST00000489794 CCT6BQ92526 530 aa6.51□□□□□ -1.37
VPS26A-206ENST00000489794 PAGR1Q9BTK6 254 aa6.51□□□□□ -1.37
VPS26A-206ENST00000489794 IL17RBQ9NRM6 502 aa6.51□□□□□ -1.37
VPS26A-206ENST00000489794 ASB6Q9NWX5 421 aa6.51□□□□□ -1.37
VPS26A-206ENST00000489794 UBE2J1Q9Y385 318 aaPredicted RBP6.51□□□□□ -1.37
VPS26A-206ENST00000489794 GXYLT2A0PJZ3 443 aa6.5□□□□□ -1.37
VPS26A-206ENST00000489794 PLEKHD1A6NEE1 506 aa6.5□□□□□ -1.37
VPS26A-206ENST00000489794 ACKR2O00590 384 aa6.5□□□□□ -1.37
VPS26A-206ENST00000489794 MT-CO3P00414 261 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms