RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 PDZD8Q8NEN9 1154 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 DQX1Q8TE96 717 aaKnown RBP13.37□□□□□ -0.27
TOP3A-206ENST00000489131 TSC1Q92574 1164 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 RUBCNQ92622 972 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 KLHL5Q96PQ7 755 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 ZNF670Q9BS34 389 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 SNRNP25Q9BV90 132 aaKnown RBP13.37□□□□□ -0.27
TOP3A-206ENST00000489131 EMILIN2Q9BXX0 1053 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 OSBPL8Q9BZF1 889 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 RAB6CQ9H0N0 254 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 NMUR1Q9HB89 426 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 TLR9Q9NR96 1032 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 RBM12Q9NTZ6 932 aaKnown RBP13.37□□□□□ -0.27
TOP3A-206ENST00000489131 SMARCAL1Q9NZC9 954 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 FBXW11Q9UKB1 542 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 GOLGA6L10A0A0M3HER8 536 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 TARSL2A2RTX5 802 aaKnown RBP13.36□□□□□ -0.27
TOP3A-206ENST00000489131 C2orf71A6NGG8 1288 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 KRIT1O00522 736 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 IRAK2O43187 625 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 ARHGEF15O94989 841 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 CXCL14O95715 111 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 RALAP11233 206 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 SSR1P43307 286 aaKnown RBP13.36□□□□□ -0.27
TOP3A-206ENST00000489131 TUBP50607 506 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 CDR1P51861 262 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 ZNF135P52742 658 aaPredicted RBP13.36□□□□□ -0.27
TOP3A-206ENST00000489131 PITX1P78337 314 aaPredicted RBP13.36□□□□□ -0.27
TOP3A-206ENST00000489131 CAMK1Q14012 370 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 CDO1Q16878 200 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 BTBD8Q5XKL5 378 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 FAM109BQ6ICB4 259 aaPredicted RBP13.36□□□□□ -0.27
TOP3A-206ENST00000489131 AADACL2Q6P093 401 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 DRICH1Q6PGQ1 229 aaPredicted RBP13.36□□□□□ -0.27
TOP3A-206ENST00000489131 KLHDC10Q6PID8 442 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 MFSD7Q6UXD7 560 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 BBS12Q6ZW61 710 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 ANKS1BQ7Z6G8 1248 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 TAC4Q86UU9 113 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 MAP7D3Q8IWC1 876 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 PRELID2Q8N945 189 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 AUTS2Q8WXX7 1259 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 UBXN4Q92575 508 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 SLCO2A1Q92959 643 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 RUNDC3BQ96NL0 473 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 TGS1Q96RS0 853 aaKnown RBP13.36□□□□□ -0.27
TOP3A-206ENST00000489131 CDK5RAP1Q96SZ6 601 aaKnown RBP13.36□□□□□ -0.27
TOP3A-206ENST00000489131 TCF25Q9BQ70 676 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 C17orf80Q9BSJ5 609 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 FRMD8P1Q9BZ68 369 aaPredicted RBP13.36□□□□□ -0.27
TOP3A-206ENST00000489131 SLITRK6Q9H5Y7 841 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 LRRC19Q9H756 370 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 ZWILCHQ9H900 591 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 TLR8Q9NR97 1041 aaKnown RBP13.36□□□□□ -0.27
TOP3A-206ENST00000489131 HOMER3Q9NSC5 361 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 OLA1Q9NTK5 396 aaKnown RBP13.36□□□□□ -0.27
TOP3A-206ENST00000489131 PIGVQ9NUD9 493 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.36□□□□□ -0.27
TOP3A-206ENST00000489131 OSER1Q9NX31 292 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 PCSK1NQ9UHG2 260 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 MTUS1Q9ULD2 1270 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 FZD10Q9ULW2 581 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 ASB3Q9Y575 518 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 INSL5Q9Y5Q6 135 aa13.36□□□□□ -0.27
TOP3A-206ENST00000489131 UQCRHLA0A096LP55 91 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.35□□□□□ -0.27
TOP3A-206ENST00000489131 A0A1W2PQH9 124 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 LRRD1A4D1F6 860 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 BHMG1C9JSJ3 638 aaPredicted RBP13.35□□□□□ -0.27
TOP3A-206ENST00000489131 H3BNC9 293 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 TGM5O43548 720 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 PHF2O75151 1096 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 SOAT2O75908 522 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 TJP3O95049 919 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 PAPLNO95428 1278 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 TUBBP07437 444 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 CA3P07451 260 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 UQCRHP07919 91 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 POU2F2P09086 479 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 IL4RP24394 825 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 DNAJB1P25685 340 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 DNAJB2P25686 324 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 GBP1P32455 592 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 ALDH1A3P47895 512 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 FNTAP49354 379 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 PGFP49763 221 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 ERVFC1P60507 584 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 DEUP1Q05D60 604 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 C2orf54Q08AI8 447 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 TAF10Q12962 218 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 SEMA3BQ13214 749 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 DPYSL3Q14195 570 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 PPP2R5DQ14738 602 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 KCNT1Q5JUK3 1230 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 BRMS1LQ5PSV4 323 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 SDHAF4Q5VUM1 108 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 TMC7Q7Z402 723 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 GPR161Q8N6U8 529 aaKnown RBP13.35□□□□□ -0.27
TOP3A-206ENST00000489131 SLC7A14Q8TBB6 771 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 HDAC7Q8WUI4 952 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms