RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 TMEM150AQ86TG1 271 aa16.72■□□□□ 0.27
CLDN11-208ENST00000488989 EFHBQ8N7U6 833 aa16.72■□□□□ 0.27
CLDN11-208ENST00000488989 VN1R2Q8NFZ6 395 aa16.72■□□□□ 0.27
CLDN11-208ENST00000488989 DQX1Q8TE96 717 aaKnown RBP16.72■□□□□ 0.27
CLDN11-208ENST00000488989 FAM172AQ8WUF8 416 aa16.72■□□□□ 0.27
CLDN11-208ENST00000488989 EDEM1Q92611 657 aa16.72■□□□□ 0.27
CLDN11-208ENST00000488989 CASP10Q92851 521 aa16.72■□□□□ 0.27
CLDN11-208ENST00000488989 TBCBQ99426 244 aa16.72■□□□□ 0.27
CLDN11-208ENST00000488989 NAPGQ99747 312 aaPredicted RBP16.72■□□□□ 0.27
CLDN11-208ENST00000488989 PRKD2Q9BZL6 878 aa16.72■□□□□ 0.27
CLDN11-208ENST00000488989 SMOC2Q9H3U7 446 aa16.72■□□□□ 0.27
CLDN11-208ENST00000488989 OLA1Q9NTK5 396 aaKnown RBP16.72■□□□□ 0.27
CLDN11-208ENST00000488989 DZANK1Q9NVP4 752 aa16.72■□□□□ 0.27
CLDN11-208ENST00000488989 TRPM5Q9NZQ8 1165 aa16.72■□□□□ 0.27
CLDN11-208ENST00000488989 HYOU1Q9Y4L1 999 aa16.72■□□□□ 0.27
CLDN11-208ENST00000488989 SOX1O00570 391 aaPredicted RBP16.71■□□□□ 0.27
CLDN11-208ENST00000488989 CCL16O15467 120 aa16.71■□□□□ 0.27
CLDN11-208ENST00000488989 DDX3YO15523 660 aaKnown RBP16.71■□□□□ 0.27
CLDN11-208ENST00000488989 SPOPO43791 374 aa16.71■□□□□ 0.27
CLDN11-208ENST00000488989 XYLBO75191 536 aa16.71■□□□□ 0.27
CLDN11-208ENST00000488989 TFE3P19532 575 aaPredicted RBP16.71■□□□□ 0.27
CLDN11-208ENST00000488989 CASQ1P31415 396 aa16.71■□□□□ 0.27
CLDN11-208ENST00000488989 CTNNA1P35221 906 aaKnown RBP16.71■□□□□ 0.27
CLDN11-208ENST00000488989 SULT1E1P49888 294 aa16.71■□□□□ 0.27
CLDN11-208ENST00000488989 TAS2R40P59535 323 aa16.71■□□□□ 0.27
CLDN11-208ENST00000488989 ATP11AP98196 1134 aa16.71■□□□□ 0.27
CLDN11-208ENST00000488989 SLC25A11Q02978 314 aaKnown RBP16.71■□□□□ 0.27
CLDN11-208ENST00000488989 GRIN2CQ14957 1233 aa16.71■□□□□ 0.27
CLDN11-208ENST00000488989 SH3PXD2AQ5TCZ1 1133 aa16.71■□□□□ 0.27
CLDN11-208ENST00000488989 PAPD7Q5XG87 772 aaKnown RBP16.71■□□□□ 0.27
CLDN11-208ENST00000488989 KLHDC10Q6PID8 442 aa16.71■□□□□ 0.27
CLDN11-208ENST00000488989 LEMD2Q8NC56 503 aa16.71■□□□□ 0.27
CLDN11-208ENST00000488989 ZNF707Q96C28 371 aaPredicted RBP16.71■□□□□ 0.27
CLDN11-208ENST00000488989 CDK5RAP1Q96SZ6 601 aaKnown RBP16.71■□□□□ 0.27
CLDN11-208ENST00000488989 PRDM12Q9H4Q4 367 aa16.71■□□□□ 0.27
CLDN11-208ENST00000488989 CALCOCO1Q9P1Z2 691 aa16.71■□□□□ 0.27
CLDN11-208ENST00000488989 PCDHA3Q9Y5H8 950 aa16.71■□□□□ 0.27
CLDN11-208ENST00000488989 HELZP42694 1942 aaKnown RBP16.7■□□□□ 0.26
CLDN11-208ENST00000488989 CCDC66A2RUB6 948 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 CTAGE9A4FU28 777 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 M0QYT0 321 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 IRAK2O43187 625 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 PSTPIP1O43586 416 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 FGF19O95750 216 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 GLP2RO95838 553 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 TRUB2O95900 331 aaKnown RBP16.7■□□□□ 0.26
CLDN11-208ENST00000488989 F9P00740 461 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 ATP1A1P05023 1023 aaKnown RBP16.7■□□□□ 0.26
CLDN11-208ENST00000488989 PRLRP16471 622 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 PTPN2P17706 415 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 MIPP30301 263 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 CDC25CP30307 473 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 RDXP35241 583 aaKnown RBP16.7■□□□□ 0.26
CLDN11-208ENST00000488989 GTF2F1P35269 517 aaKnown RBP eCLIP16.7■□□□□ 0.26
CLDN11-208ENST00000488989 PEX5P50542 639 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 NNTQ13423 1086 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 RPS6KA1Q15418 735 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 CDO1Q16878 200 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 RAB6CQ53S08 254 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 GAREM2Q75VX8 874 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 POLNQ7Z5Q5 900 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 TAC4Q86UU9 113 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 RHOT1Q8IXI2 618 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 HS6ST3Q8IZP7 471 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 RNF139Q8WU17 664 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 RAB6CQ9H0N0 254 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 SFXN1Q9H9B4 322 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 WDR6Q9NNW5 1121 aaKnown RBP16.7■□□□□ 0.26
CLDN11-208ENST00000488989 ASAH2Q9NR71 780 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 DNMT3BQ9UBC3 853 aaKnown RBP16.7■□□□□ 0.26
CLDN11-208ENST00000488989 PACSIN2Q9UNF0 486 aaPredicted RBP16.7■□□□□ 0.26
CLDN11-208ENST00000488989 USTQ9Y2C2 406 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 MTCH2Q9Y6C9 303 aa16.7■□□□□ 0.26
CLDN11-208ENST00000488989 CCDC195A0A1B0GUA6 201 aa16.69■□□□□ 0.26
CLDN11-208ENST00000488989 ENC1O14682 589 aa16.69■□□□□ 0.26
CLDN11-208ENST00000488989 NCK2O43639 380 aa16.69■□□□□ 0.26
CLDN11-208ENST00000488989 TLR5O60602 858 aa16.69■□□□□ 0.26
CLDN11-208ENST00000488989 OLFM2O95897 454 aa16.69■□□□□ 0.26
CLDN11-208ENST00000488989 OAS1P00973 400 aaKnown RBP16.69■□□□□ 0.26
CLDN11-208ENST00000488989 TCF4P15884 667 aa16.69■□□□□ 0.26
CLDN11-208ENST00000488989 PFKLP17858 780 aa16.69■□□□□ 0.26
CLDN11-208ENST00000488989 IL1R2P27930 398 aa16.69■□□□□ 0.26
CLDN11-208ENST00000488989 GABRR2P28476 465 aa16.69■□□□□ 0.26
CLDN11-208ENST00000488989 RBM10P98175 930 aaKnown RBP16.69■□□□□ 0.26
CLDN11-208ENST00000488989 AMPD2Q01433 879 aa16.69■□□□□ 0.26
CLDN11-208ENST00000488989 DEUP1Q05D60 604 aa16.69■□□□□ 0.26
CLDN11-208ENST00000488989 ADAM15Q13444 863 aa16.69■□□□□ 0.26
CLDN11-208ENST00000488989 ADGRE1Q14246 886 aa16.69■□□□□ 0.26
CLDN11-208ENST00000488989 COL19A1Q14993 1142 aa16.69■□□□□ 0.26
CLDN11-208ENST00000488989 HADHQ16836 314 aaKnown RBP16.69■□□□□ 0.26
CLDN11-208ENST00000488989 HECTD3Q5T447 861 aa16.69■□□□□ 0.26
CLDN11-208ENST00000488989 ZNF697Q5TEC3 545 aa16.69■□□□□ 0.26
CLDN11-208ENST00000488989 DAB2IPQ5VWQ8 1189 aa16.69■□□□□ 0.26
CLDN11-208ENST00000488989 CYP4V2Q6ZWL3 525 aaPredicted RBP16.69■□□□□ 0.26
CLDN11-208ENST00000488989 TADA2BQ86TJ2 420 aa16.69■□□□□ 0.26
CLDN11-208ENST00000488989 KIF18AQ8NI77 898 aa16.69■□□□□ 0.26
CLDN11-208ENST00000488989 KRT35Q92764 455 aa16.69■□□□□ 0.26
CLDN11-208ENST00000488989 SERPINB11Q96P15 392 aa16.69■□□□□ 0.26
CLDN11-208ENST00000488989 CORO1BQ9BR76 489 aa16.69■□□□□ 0.26
CLDN11-208ENST00000488989 USP18Q9UMW8 372 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms