RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 PKP1Q13835 747 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 KCNC3Q14003 757 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 CBX2Q14781 532 aaPredicted RBP5.53□□□□□ -1.52
SF3A3-207ENST00000488934 PTPN14Q15678 1187 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 UPP1Q16831 310 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 GLRA4Q5JXX5 417 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 RTP2Q5QGT7 225 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 ANKRD54Q6NXT1 300 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 DCLRE1AQ6PJP8 1040 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 SHC4Q6S5L8 630 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 ALKAL1Q6UXT8 129 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 C15orf39Q6ZRI6 1047 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 ANKS3Q6ZW76 656 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 RTL10Q7L3V2 364 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 ADGRD2Q7Z7M1 963 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 TMEM173Q86WV6 379 aaPredicted RBP5.53□□□□□ -1.52
SF3A3-207ENST00000488934 ADHFE1Q8IWW8 467 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 SYCP3Q8IZU3 236 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 BEST2Q8NFU1 509 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.53□□□□□ -1.52
SF3A3-207ENST00000488934 LRRC15Q8TF66 581 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 HDAC7Q8WUI4 952 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 POMGNT1Q8WZA1 660 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 DNAJC19Q96DA6 116 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 MSLNLQ96KJ4 702 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 PPP1R10Q96QC0 940 aaKnown RBP5.53□□□□□ -1.52
SF3A3-207ENST00000488934 FIZ1Q96SL8 496 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 C7orf25Q9BPX7 421 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 TTPALQ9BTX7 342 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 TRIM9Q9C026 710 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 KLHL25Q9H0H3 589 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 PLEKHA4Q9H4M7 779 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 ASB7Q9H672 318 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 KIAA1586Q9HCI6 787 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 POLD4Q9HCU8 107 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 CD320Q9NPF0 282 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 MIOSQ9NXC5 875 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 CGNQ9P2M7 1197 aaKnown RBP5.53□□□□□ -1.52
SF3A3-207ENST00000488934 HOOK1Q9UJC3 728 aaKnown RBP5.53□□□□□ -1.52
SF3A3-207ENST00000488934 AGO2Q9UKV8 859 aaKnown RBP5.53□□□□□ -1.52
SF3A3-207ENST00000488934 BARX2Q9UMQ3 279 aaPredicted RBP5.53□□□□□ -1.52
SF3A3-207ENST00000488934 UBQLN1Q9UMX0 589 aaKnown RBP5.53□□□□□ -1.52
SF3A3-207ENST00000488934 PCDHA7Q9UN72 937 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 DERAQ9Y315 318 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 HCFC2Q9Y5Z7 792 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 STYXL1Q9Y6J8 313 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 PLXNA3P51805 1871 aa5.53□□□□□ -1.52
SF3A3-207ENST00000488934 DENND4AQ7Z401 1863 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 NCOR1O75376 2440 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 TRBV23OR9-2A0A075B6M9 112 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 A0A087X0B3 334 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 TTC26A0AVF1 554 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 H7C4K7 107 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 PODXLO00592 558 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 SYN3O14994 580 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 FGF10O15520 208 aaPredicted RBP5.52□□□□□ -1.53
SF3A3-207ENST00000488934 LINC01565O15544 149 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 B4GALT3O60512 393 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 CLASP2O75122 1294 aaKnown RBP5.52□□□□□ -1.53
SF3A3-207ENST00000488934 EFEMP2O95967 443 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 CNPP09543 421 aaKnown RBP5.52□□□□□ -1.53
SF3A3-207ENST00000488934 CXCL8P10145 99 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 PFKFB1P16118 471 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 LRPAP1P30533 357 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 GTF2F1P35269 517 aaKnown RBP eCLIP5.52□□□□□ -1.53
SF3A3-207ENST00000488934 LTBRP36941 435 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 SYKP43405 635 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 CLCN4P51793 760 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 CLCNKBP51801 687 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 ZNF143P52747 638 aaPredicted RBP5.52□□□□□ -1.53
SF3A3-207ENST00000488934 CORO7P57737 925 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 SRSF3P84103 164 aaKnown RBP5.52□□□□□ -1.53
SF3A3-207ENST00000488934 PPP2R5DQ14738 602 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 TMEM132DQ14C87 1099 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 NCAPHQ15003 741 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 SURF1Q15526 300 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 NAB2Q15742 525 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 SLC10A6Q3KNW5 377 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 ZC2HC1CQ53FD0 456 aaPredicted RBP5.52□□□□□ -1.53
SF3A3-207ENST00000488934 FAM26FQ5R3K3 315 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 ATAT1Q5SQI0 421 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 LIN9Q5TKA1 542 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 FAM171A1Q5VUB5 890 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 ARMCX5Q6P1M9 558 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 POMZP3Q6PJE2 187 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 VHLLQ6RSH7 139 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 UNC13DQ70J99 1090 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 CEP57Q86XR8 500 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 APPL2Q8NEU8 664 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 GOLGA5Q8TBA6 731 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 HASPINQ8TF76 798 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 LEO1Q8WVC0 666 aaPredicted RBP5.52□□□□□ -1.53
SF3A3-207ENST00000488934 RIN2Q8WYP3 895 aaPredicted RBP5.52□□□□□ -1.53
SF3A3-207ENST00000488934 STAMQ92783 540 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 ANAPC16Q96DE5 110 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 KLHL5Q96PQ7 755 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 PHF7Q9BWX1 381 aaPredicted RBP5.52□□□□□ -1.53
SF3A3-207ENST00000488934 RHOBTB2Q9BYZ6 727 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 PANK2Q9BZ23 570 aa5.52□□□□□ -1.53
SF3A3-207ENST00000488934 GTPBP4Q9BZE4 634 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms