RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 EFEMP1Q12805 493 aa12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 MORC3Q14149 939 aa12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 USP39Q53GS9 565 aaKnown RBP12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 SGO2Q562F6 1265 aa12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 RAB41Q5JT25 222 aa12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 EOGTQ5NDL2 527 aa12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 C10orf76Q5T2E6 689 aa12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 RASSF3Q86WH2 238 aa12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 MDGA1Q8NFP4 955 aa12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 UBA3Q8TBC4 463 aa12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 SMOC1Q9H4F8 434 aa12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 FAM124BQ9H5Z6 455 aaPredicted RBP12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 DNAJC17Q9NVM6 304 aaKnown RBP12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 WDR35Q9P2L0 1181 aa12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 RASAL2Q9UJF2 1139 aa12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 CTNND2Q9UQB3 1225 aa12.54□□□□□ -0.4
CCHCR1-215ENST00000488920 CEP250Q9BV73 2442 aa12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 HELZP42694 1942 aaKnown RBP12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 ALDH1A2O94788 518 aa12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 RHOBTB1O94844 696 aa12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 ZBED1O96006 694 aa12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 ZNF806P0C7X5 589 aa12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 TBXAS1P24557 533 aaPredicted RBP12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 PPP1R2P41236 205 aa12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 WASP42768 502 aa12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 YWHAGP61981 247 aaKnown RBP eCLIP12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 YWHAEP62258 255 aaKnown RBP12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 ELF2Q15723 593 aa12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 HSF5Q4G112 596 aaPredicted RBP12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 PREPLQ4J6C6 727 aaPredicted RBP12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 GRAMD4Q6IC98 578 aa12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 Q6ZNB5 142 aa12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 NUDT18Q6ZVK8 323 aa12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 RSRC2Q7L4I2 434 aaKnown RBP12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 ARHGAP18Q8N392 663 aa12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 ZNF276Q8N554 614 aa12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 UBR7Q8N806 425 aa12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 TERB1Q8NA31 727 aa12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 NETO1Q8TDF5 533 aa12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 RLN3Q8WXF3 142 aa12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 CNOT6LQ96LI5 555 aaKnown RBP12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 NT5C1BQ96P26 610 aa12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 XPO6Q96QU8 1125 aaKnown RBP12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 CDK5RAP1Q96SZ6 601 aaKnown RBP12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 RTKNQ9BST9 563 aa12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 ULBP1Q9BZM6 244 aa12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 PLK2Q9NYY3 685 aa12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 HESX1Q9UBX0 185 aa12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 TSPAN16Q9UKR8 245 aa12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 HCN2Q9UL51 889 aa12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 CIZ1Q9ULV3 898 aaPredicted RBP12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 PCDHB4Q9Y5E5 795 aa12.53□□□□□ -0.4
CCHCR1-215ENST00000488920 SLC12A8A0AV02 714 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 BICDL2A1A5D9 508 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 RNF225M0QZC1 329 aaPredicted RBP12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 SLC30A4O14863 429 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 XPO1O14980 1071 aaKnown RBP12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 CACNG3O60359 315 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 CALCAP01258 141 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 VDRP11473 427 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 BCKDHBP21953 392 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 MPLP40238 635 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 BCAT1P54687 386 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 COG7P83436 770 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 CREB5Q02930 508 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 AASDHQ4L235 1098 aaPredicted RBP12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 PLA2G2CQ5R387 149 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 PM20D1Q6GTS8 502 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 TMEM270Q6UE05 265 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 TOGARAM2Q6ZUX3 1019 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 RRAGAQ7L523 313 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 PGBD3Q8N328 593 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 PPM1KQ8N3J5 372 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 ZNF513Q8N8E2 541 aaPredicted RBP12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 C12orf50Q8NA57 414 aaPredicted RBP12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 LMO3Q8TAP4 145 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 KCNV2Q8TDN2 545 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 HMGB4Q8WW32 186 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 TFAP2BQ92481 460 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 KAT5Q92993 513 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 ERLEC1Q96DZ1 483 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 P2RY11Q96G91 374 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 SRRTQ9BXP5 876 aaKnown RBP12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 LRRC4Q9HBW1 653 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 POLMQ9NP87 494 aaPredicted RBP12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 RXFP3Q9NSD7 469 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 MARK1Q9P0L2 795 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 MARCH2Q9P0N8 246 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 BCCIPQ9P287 314 aaKnown RBP eCLIP12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 KIAA1257Q9ULG3 409 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 PCDHGA5Q9Y5G8 931 aa12.52□□□□□ -0.41
CCHCR1-215ENST00000488920 TCRBV21S2A2A0A5A6 115 aa12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 PRRT4C9JH25 899 aa12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 O00370 1275 aa12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 PMM2O15305 246 aa12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 FOXD2O60548 495 aaPredicted RBP12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 CISD3P0C7P0 127 aa12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 LCP1P13796 627 aa12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 CORO1AP31146 461 aaKnown RBP12.51□□□□□ -0.41
CCHCR1-215ENST00000488920 DGKGP49619 791 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms