RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 DGKGP49619 791 aa20.1■□□□□ 0.81
GGPS1-206ENST00000488594 PGFP49763 221 aa20.1■□□□□ 0.81
GGPS1-206ENST00000488594 COL9A2Q14055 689 aaPredicted RBP20.1■□□□□ 0.81
GGPS1-206ENST00000488594 PLEKHG6Q3KR16 790 aa20.1■□□□□ 0.81
GGPS1-206ENST00000488594 WDR45BQ5MNZ6 344 aa20.1■□□□□ 0.81
GGPS1-206ENST00000488594 TPGS1Q6ZTW0 290 aa20.1■□□□□ 0.81
GGPS1-206ENST00000488594 RAB44Q7Z6P3 723 aaPredicted RBP20.1■□□□□ 0.81
GGPS1-206ENST00000488594 RGL4Q8IZJ4 473 aa20.1■□□□□ 0.81
GGPS1-206ENST00000488594 TMEM174Q8WUU8 243 aa20.1■□□□□ 0.81
GGPS1-206ENST00000488594 ZDHHC5Q9C0B5 715 aa20.1■□□□□ 0.81
GGPS1-206ENST00000488594 MYO18AQ92614 2054 aaKnown RBP20.1■□□□□ 0.81
GGPS1-206ENST00000488594 SPEGQ15772 3267 aa20.1■□□□□ 0.81
GGPS1-206ENST00000488594 PKD1L2Q7Z442 2459 aa20.1■□□□□ 0.81
GGPS1-206ENST00000488594 POLR2DO15514 142 aaKnown RBP20.09■□□□□ 0.81
GGPS1-206ENST00000488594 VNN1O95497 513 aa20.09■□□□□ 0.81
GGPS1-206ENST00000488594 FAM200BP0CF97 657 aa20.09■□□□□ 0.81
GGPS1-206ENST00000488594 NDST1P52848 882 aa20.09■□□□□ 0.81
GGPS1-206ENST00000488594 FAM193AP78312 1265 aa20.09■□□□□ 0.81
GGPS1-206ENST00000488594 LRSAM1Q6UWE0 723 aa20.09■□□□□ 0.81
GGPS1-206ENST00000488594 TOGARAM2Q6ZUX3 1019 aa20.09■□□□□ 0.81
GGPS1-206ENST00000488594 TADA2BQ86TJ2 420 aa20.09■□□□□ 0.81
GGPS1-206ENST00000488594 SLC9A9Q8IVB4 645 aa20.09■□□□□ 0.81
GGPS1-206ENST00000488594 CHCHD4Q8N4Q1 142 aa20.09■□□□□ 0.81
GGPS1-206ENST00000488594 BLZF1Q9H2G9 400 aa20.09■□□□□ 0.81
GGPS1-206ENST00000488594 PNPLA8Q9NP80 782 aa20.09■□□□□ 0.81
GGPS1-206ENST00000488594 LHX6Q9UPM6 363 aa20.09■□□□□ 0.81
GGPS1-206ENST00000488594 PCDHA5Q9Y5H7 936 aa20.09■□□□□ 0.81
GGPS1-206ENST00000488594 PCDH15Q96QU1 1955 aa20.09■□□□□ 0.81
GGPS1-206ENST00000488594 ZFYVE26Q68DK2 2539 aa20.09■□□□□ 0.81
GGPS1-206ENST00000488594 NPC1O15118 1278 aa20.08■□□□□ 0.81
GGPS1-206ENST00000488594 PLA2G4AP47712 749 aa20.08■□□□□ 0.81
GGPS1-206ENST00000488594 ZNF132P52740 706 aa20.08■□□□□ 0.81
GGPS1-206ENST00000488594 RING1Q06587 406 aa20.08■□□□□ 0.81
GGPS1-206ENST00000488594 STARD3Q14849 445 aa20.08■□□□□ 0.81
GGPS1-206ENST00000488594 TRIP6Q15654 476 aaKnown RBP20.08■□□□□ 0.81
GGPS1-206ENST00000488594 ZACNQ401N2 412 aa20.08■□□□□ 0.81
GGPS1-206ENST00000488594 METTL3Q86U44 580 aaKnown RBP20.08■□□□□ 0.81
GGPS1-206ENST00000488594 OR2I1PQ8NGU4 316 aa20.08■□□□□ 0.81
GGPS1-206ENST00000488594 FAM49BQ9NUQ9 324 aa20.08■□□□□ 0.81
GGPS1-206ENST00000488594 DMAC2Q9NW81 257 aa20.08■□□□□ 0.81
GGPS1-206ENST00000488594 CACNA2D2Q9NY47 1150 aa20.08■□□□□ 0.81
GGPS1-206ENST00000488594 DNMT3LQ9UJW3 386 aa20.08■□□□□ 0.81
GGPS1-206ENST00000488594 NFE2L3Q9Y4A8 694 aa20.08■□□□□ 0.81
GGPS1-206ENST00000488594 PCDHB9Q9Y5E1 797 aa20.08■□□□□ 0.81
GGPS1-206ENST00000488594 RAD54BQ9Y620 910 aa20.08■□□□□ 0.81
GGPS1-206ENST00000488594 CYP26A1O43174 497 aa20.08■□□□□ 0.8
GGPS1-206ENST00000488594 GJB3O75712 270 aa20.08■□□□□ 0.8
GGPS1-206ENST00000488594 CISD3P0C7P0 127 aa20.08■□□□□ 0.8
GGPS1-206ENST00000488594 CASP1P29466 404 aa20.08■□□□□ 0.8
GGPS1-206ENST00000488594 CD6P30203 668 aa20.08■□□□□ 0.8
GGPS1-206ENST00000488594 KIAA1324Q6UXG2 1013 aaKnown RBP20.08■□□□□ 0.8
GGPS1-206ENST00000488594 Q6ZNB5 142 aa20.08■□□□□ 0.8
GGPS1-206ENST00000488594 C12orf29Q8N999 325 aa20.08■□□□□ 0.8
GGPS1-206ENST00000488594 HNRNPABQ99729 332 aaKnown RBP20.08■□□□□ 0.8
GGPS1-206ENST00000488594 OSER1Q9NX31 292 aa20.08■□□□□ 0.8
GGPS1-206ENST00000488594 FAM13BQ9NYF5 915 aa20.08■□□□□ 0.8
GGPS1-206ENST00000488594 HMGXB4Q9UGU5 601 aa20.08■□□□□ 0.8
GGPS1-206ENST00000488594 SLC27A6Q9Y2P4 619 aa20.08■□□□□ 0.8
GGPS1-206ENST00000488594 IKBKBO14920 756 aa20.07■□□□□ 0.8
GGPS1-206ENST00000488594 SH3BP5O60239 455 aa20.07■□□□□ 0.8
GGPS1-206ENST00000488594 ASS1P00966 412 aaKnown RBP20.07■□□□□ 0.8
GGPS1-206ENST00000488594 ASPAP45381 313 aa20.07■□□□□ 0.8
GGPS1-206ENST00000488594 PSEN1P49768 467 aa20.07■□□□□ 0.8
GGPS1-206ENST00000488594 ORC1Q13415 861 aa20.07■□□□□ 0.8
GGPS1-206ENST00000488594 E2F5Q15329 346 aa20.07■□□□□ 0.8
GGPS1-206ENST00000488594 CLEC20AQ6ZU45 233 aa20.07■□□□□ 0.8
GGPS1-206ENST00000488594 TMC2Q8TDI7 906 aa20.07■□□□□ 0.8
GGPS1-206ENST00000488594 ADAMTS14Q8WXS8 1223 aa20.07■□□□□ 0.8
GGPS1-206ENST00000488594 CDK5RAP1Q96SZ6 601 aaKnown RBP20.07■□□□□ 0.8
GGPS1-206ENST00000488594 DNAI2Q9GZS0 605 aa20.07■□□□□ 0.8
GGPS1-206ENST00000488594 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.07■□□□□ 0.8
GGPS1-206ENST00000488594 FBXO10Q9UK96 956 aa20.07■□□□□ 0.8
GGPS1-206ENST00000488594 ZNF510Q9Y2H8 683 aa20.07■□□□□ 0.8
GGPS1-206ENST00000488594 STON1Q9Y6Q2 735 aa20.07■□□□□ 0.8
GGPS1-206ENST00000488594 AKAP13Q12802 2813 aa20.06■□□□□ 0.8
GGPS1-206ENST00000488594 HHLA1C9JL84 531 aa20.06■□□□□ 0.8
GGPS1-206ENST00000488594 RARGP13631 454 aa20.06■□□□□ 0.8
GGPS1-206ENST00000488594 HOXB3P14651 431 aaPredicted RBP20.06■□□□□ 0.8
GGPS1-206ENST00000488594 ACO1P21399 889 aaKnown RBP20.06■□□□□ 0.8
GGPS1-206ENST00000488594 ADORA2BP29275 332 aa20.06■□□□□ 0.8
GGPS1-206ENST00000488594 DLG4P78352 724 aa20.06■□□□□ 0.8
GGPS1-206ENST00000488594 INCA1Q0VD86 236 aa20.06■□□□□ 0.8
GGPS1-206ENST00000488594 CUL4BQ13620 913 aa20.06■□□□□ 0.8
GGPS1-206ENST00000488594 C10orf120Q5SQS8 335 aa20.06■□□□□ 0.8
GGPS1-206ENST00000488594 SV2AQ7L0J3 742 aa20.06■□□□□ 0.8
GGPS1-206ENST00000488594 GPRIN1Q7Z2K8 1008 aa20.06■□□□□ 0.8
GGPS1-206ENST00000488594 PROSER1Q86XN7 944 aa20.06■□□□□ 0.8
GGPS1-206ENST00000488594 NAXDQ8IW45 347 aa20.06■□□□□ 0.8
GGPS1-206ENST00000488594 ZNF276Q8N554 614 aa20.06■□□□□ 0.8
GGPS1-206ENST00000488594 CADM4Q8NFZ8 388 aa20.06■□□□□ 0.8
GGPS1-206ENST00000488594 DNASE2BQ8WZ79 361 aa20.06■□□□□ 0.8
GGPS1-206ENST00000488594 ELMO3Q96BJ8 720 aa20.06■□□□□ 0.8
GGPS1-206ENST00000488594 BACH2Q9BYV9 841 aa20.06■□□□□ 0.8
GGPS1-206ENST00000488594 SLC6A17Q9H1V8 727 aa20.06■□□□□ 0.8
GGPS1-206ENST00000488594 PRDM16Q9HAZ2 1276 aa20.06■□□□□ 0.8
GGPS1-206ENST00000488594 USP36Q9P275 1121 aaKnown RBP20.06■□□□□ 0.8
GGPS1-206ENST00000488594 BAHCC1Q9P281 2608 aa20.05■□□□□ 0.8
GGPS1-206ENST00000488594 A0A1B0GTW7 788 aa20.05■□□□□ 0.8
GGPS1-206ENST00000488594 A0A1W2PQH9 124 aa20.05■□□□□ 0.8
GGPS1-206ENST00000488594 MEI4A8MW99 385 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms