RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 GKN1Q9NS71 199 aa16.46■□□□□ 0.23
C9orf3-219ENST00000488186 ASNSD1Q9NWL6 643 aa16.46■□□□□ 0.23
C9orf3-219ENST00000488186 CFAP97Q9P2B7 532 aa16.46■□□□□ 0.23
C9orf3-219ENST00000488186 WDR35Q9P2L0 1181 aa16.46■□□□□ 0.23
C9orf3-219ENST00000488186 ADAMTS1Q9UHI8 967 aa16.46■□□□□ 0.23
C9orf3-219ENST00000488186 MUTYHQ9UIF7 546 aa16.46■□□□□ 0.23
C9orf3-219ENST00000488186 LSM7Q9UK45 103 aaKnown RBP16.46■□□□□ 0.23
C9orf3-219ENST00000488186 OBSL1O75147 1896 aa16.46■□□□□ 0.22
C9orf3-219ENST00000488186 MYO16Q9Y6X6 1858 aa16.46■□□□□ 0.22
C9orf3-219ENST00000488186 ANAPC1Q9H1A4 1944 aa16.45■□□□□ 0.22
C9orf3-219ENST00000488186 SLC12A8A0AV02 714 aa16.45■□□□□ 0.22
C9orf3-219ENST00000488186 GPR37L1O60883 481 aa16.45■□□□□ 0.22
C9orf3-219ENST00000488186 GRAP2O75791 330 aa16.45■□□□□ 0.22
C9orf3-219ENST00000488186 OLFM2O95897 454 aa16.45■□□□□ 0.22
C9orf3-219ENST00000488186 HMBSP08397 361 aa16.45■□□□□ 0.22
C9orf3-219ENST00000488186 MMP8P22894 467 aa16.45■□□□□ 0.22
C9orf3-219ENST00000488186 HNRNPH3P31942 346 aaKnown RBP16.45■□□□□ 0.22
C9orf3-219ENST00000488186 ZXDAP98168 799 aa16.45■□□□□ 0.22
C9orf3-219ENST00000488186 ARHGAP29Q52LW3 1261 aa16.45■□□□□ 0.22
C9orf3-219ENST00000488186 BHLHA9Q7RTU4 235 aa16.45■□□□□ 0.22
C9orf3-219ENST00000488186 PHLDB2Q86SQ0 1253 aa16.45■□□□□ 0.22
C9orf3-219ENST00000488186 XYLT1Q86Y38 959 aa16.45■□□□□ 0.22
C9orf3-219ENST00000488186 PHF13Q86YI8 300 aaPredicted RBP16.45■□□□□ 0.22
C9orf3-219ENST00000488186 KHSRPQ92945 711 aaKnown RBP eCLIP16.45■□□□□ 0.22
C9orf3-219ENST00000488186 IRF7Q92985 503 aa16.45■□□□□ 0.22
C9orf3-219ENST00000488186 NUP210Q8TEM1 1887 aaPredicted RBP16.45■□□□□ 0.22
C9orf3-219ENST00000488186 ANKRD62A6NC57 917 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 DDX3XO00571 662 aaKnown RBP eCLIP16.44■□□□□ 0.22
C9orf3-219ENST00000488186 SLC9A3R1O14745 358 aaPredicted RBP16.44■□□□□ 0.22
C9orf3-219ENST00000488186 AKR1B10O60218 316 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 RTN2O75298 545 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 FTLP02792 175 aaPredicted RBP16.44■□□□□ 0.22
C9orf3-219ENST00000488186 PLEKP08567 350 aaPredicted RBP16.44■□□□□ 0.22
C9orf3-219ENST00000488186 SRFP11831 508 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 GZMAP12544 262 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 CDC25BP30305 580 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 GBP1P32455 592 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 EIF4A3P38919 411 aaKnown RBP16.44■□□□□ 0.22
C9orf3-219ENST00000488186 IFNAR2P48551 515 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 KPNA1P52294 538 aaPredicted RBP16.44■□□□□ 0.22
C9orf3-219ENST00000488186 CDK17Q00537 523 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 PFKPQ01813 784 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 C1QBPQ07021 282 aaKnown RBP16.44■□□□□ 0.22
C9orf3-219ENST00000488186 MTF1Q14872 753 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 TAF5Q15542 800 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 DCAF6Q58WW2 860 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 HGSNATQ68CP4 663 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 OLFML1Q6UWY5 402 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 BEND5Q7L4P6 421 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 BMP8AQ7Z5Y6 402 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.44■□□□□ 0.22
C9orf3-219ENST00000488186 SPC24Q8NBT2 197 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 CSGALNACT1Q8TDX6 532 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 RSPRY1Q96DX4 576 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 CCDC42Q96M95 316 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 SELENOOQ9BVL4 669 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 KLF16Q9BXK1 252 aaPredicted RBP16.44■□□□□ 0.22
C9orf3-219ENST00000488186 GRPEL1Q9HAV7 217 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 DUS2Q9NX74 493 aaKnown RBP16.44■□□□□ 0.22
C9orf3-219ENST00000488186 SFMBT1Q9UHJ3 866 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 FBXL21Q9UKT6 434 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 DUSP12Q9UNI6 340 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 NAALADL1Q9UQQ1 740 aa16.44■□□□□ 0.22
C9orf3-219ENST00000488186 CHADO15335 359 aa16.43■□□□□ 0.22
C9orf3-219ENST00000488186 TCF3P15923 654 aa16.43■□□□□ 0.22
C9orf3-219ENST00000488186 SCNN1AP37088 669 aa16.43■□□□□ 0.22
C9orf3-219ENST00000488186 GPC5P78333 572 aa16.43■□□□□ 0.22
C9orf3-219ENST00000488186 SIGLEC14Q08ET2 396 aa16.43■□□□□ 0.22
C9orf3-219ENST00000488186 ZNF77Q15935 545 aa16.43■□□□□ 0.22
C9orf3-219ENST00000488186 CCDC122Q5T0U0 273 aa16.43■□□□□ 0.22
C9orf3-219ENST00000488186 SLC26A9Q7LBE3 791 aa16.43■□□□□ 0.22
C9orf3-219ENST00000488186 DEFB106AQ8N104 65 aa16.43■□□□□ 0.22
C9orf3-219ENST00000488186 ANP32BQ92688 251 aaKnown RBP16.43■□□□□ 0.22
C9orf3-219ENST00000488186 RNF34Q969K3 372 aa16.43■□□□□ 0.22
C9orf3-219ENST00000488186 TRIM11Q96F44 468 aa16.43■□□□□ 0.22
C9orf3-219ENST00000488186 VCPIP1Q96JH7 1222 aa16.43■□□□□ 0.22
C9orf3-219ENST00000488186 LRRC3BQ96PB8 259 aa16.43■□□□□ 0.22
C9orf3-219ENST00000488186 SYT11Q9BT88 431 aa16.43■□□□□ 0.22
C9orf3-219ENST00000488186 DCLK3Q9C098 648 aa16.43■□□□□ 0.22
C9orf3-219ENST00000488186 SLC2A4RGQ9NR83 387 aa16.43■□□□□ 0.22
C9orf3-219ENST00000488186 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.43■□□□□ 0.22
C9orf3-219ENST00000488186 ARHGAP20Q9P2F6 1191 aa16.43■□□□□ 0.22
C9orf3-219ENST00000488186 TBC1D14Q9P2M4 693 aa16.43■□□□□ 0.22
C9orf3-219ENST00000488186 IMPACTQ9P2X3 320 aa16.43■□□□□ 0.22
C9orf3-219ENST00000488186 E2F8A0AVK6 867 aa16.42■□□□□ 0.22
C9orf3-219ENST00000488186 NARSO43776 548 aaKnown RBP16.42■□□□□ 0.22
C9orf3-219ENST00000488186 DAB1O75553 588 aa16.42■□□□□ 0.22
C9orf3-219ENST00000488186 KRT3P12035 628 aa16.42■□□□□ 0.22
C9orf3-219ENST00000488186 NOS2P35228 1153 aa16.42■□□□□ 0.22
C9orf3-219ENST00000488186 HARS2P49590 506 aaKnown RBP16.42■□□□□ 0.22
C9orf3-219ENST00000488186 FCHO2Q0JRZ9 810 aa16.42■□□□□ 0.22
C9orf3-219ENST00000488186 USP4Q13107 963 aa16.42■□□□□ 0.22
C9orf3-219ENST00000488186 ARID5BQ14865 1188 aa16.42■□□□□ 0.22
C9orf3-219ENST00000488186 PDGFRLQ15198 375 aa16.42■□□□□ 0.22
C9orf3-219ENST00000488186 SYPL2Q5VXT5 272 aa16.42■□□□□ 0.22
C9orf3-219ENST00000488186 DNAJC24Q6P3W2 148 aa16.42■□□□□ 0.22
C9orf3-219ENST00000488186 WDR59Q6PJI9 974 aa16.42■□□□□ 0.22
C9orf3-219ENST00000488186 TRIM67Q6ZTA4 783 aa16.42■□□□□ 0.22
C9orf3-219ENST00000488186 MCOLN2Q8IZK6 566 aa16.42■□□□□ 0.22
C9orf3-219ENST00000488186 OSCP1Q8WVF1 389 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms