RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 DEC1Q9P2X7 70 aa11.89□□□□□ -0.51
NIPAL3-207ENST00000488155 EBF1Q9UH73 591 aa11.89□□□□□ -0.51
NIPAL3-207ENST00000488155 HOOK1Q9UJC3 728 aaKnown RBP11.89□□□□□ -0.51
NIPAL3-207ENST00000488155 DNMT3LQ9UJW3 386 aa11.89□□□□□ -0.51
NIPAL3-207ENST00000488155 LAMA1P25391 3075 aa11.89□□□□□ -0.51
NIPAL3-207ENST00000488155 CKAP5Q14008 2032 aa11.89□□□□□ -0.51
NIPAL3-207ENST00000488155 HOXC11O43248 304 aaPredicted RBP11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 GREM1O60565 184 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 ADAM23O75077 832 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 STC2O76061 302 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 CALCAP01258 141 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 RALAP11233 206 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 TYRP14679 529 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 MPLP40238 635 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 EIF2DP41214 584 aaKnown RBP11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 PLA2G4AP47712 749 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 MCCD1P59942 119 aaPredicted RBP11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 LRRC63Q05C16 580 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 PDE4CQ08493 712 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 CUL2Q13617 745 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 ELF2Q15723 593 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 USP39Q53GS9 565 aaKnown RBP11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 COBLL1Q53SF7 1204 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 EOGTQ5NDL2 527 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 ARHGAP17Q68EM7 881 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 TCEAL6Q6IPX3 200 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 TOGARAM2Q6ZUX3 1019 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 CCDC186Q7Z3E2 898 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 ZC3H3Q8IXZ2 948 aaKnown RBP11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 ZNF513Q8N8E2 541 aaPredicted RBP11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 NETO1Q8TDF5 533 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 HMGB4Q8WW32 186 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 NELFBQ8WX92 580 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 TCEAL3Q969E4 200 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 SLC35C1Q96A29 364 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 LOXL4Q96JB6 756 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 ZC3H10Q96K80 434 aaKnown RBP11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 BCCIPQ9P287 314 aaKnown RBP eCLIP11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 TSPAN16Q9UKR8 245 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 CTNND2Q9UQB3 1225 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 COQ4Q9Y3A0 265 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 USP3Q9Y6I4 520 aa11.88□□□□□ -0.51
NIPAL3-207ENST00000488155 A0A0A0MRY4 1105 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 TCRBV21S2A2A0A5A6 115 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 PIK3R2O00459 728 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 SLC30A4O14863 429 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 ALDH1A2O94788 518 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 RHOBTB1O94844 696 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 ZNF806P0C7X5 589 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 CHRM1P11229 460 aaPredicted RBP11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 BMP6P22004 513 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 ANP32AP39687 249 aaKnown RBP11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 TNFRSF4P43489 277 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 FMO5P49326 533 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 PSEN1P49768 467 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 TKTL1P51854 596 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 SGO2Q562F6 1265 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 EGFLAMQ63HQ2 1017 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 GRAMD4Q6IC98 578 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 RSRC2Q7L4I2 434 aaKnown RBP11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 ARMCX6Q7L4S7 300 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 RASSF3Q86WH2 238 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 TTC39CQ8N584 583 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 TERB1Q8NA31 727 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 ANKRD52Q8NB46 1076 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 KAT5Q92993 513 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 DHTKD1Q96HY7 919 aaPredicted RBP11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 CNOT6LQ96LI5 555 aaKnown RBP11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 XPO6Q96QU8 1125 aaKnown RBP11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 ACOX2Q99424 681 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 DUSP9Q99956 384 aaKnown RBP11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 ULBP1Q9BZM6 244 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 LRRC4Q9HBW1 653 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 POLMQ9NP87 494 aaPredicted RBP11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 HCN2Q9UL51 889 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 PCDHB4Q9Y5E5 795 aa11.87□□□□□ -0.51
NIPAL3-207ENST00000488155 CABIN1Q9Y6J0 2220 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 CACNA1EQ15878 2313 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 SLC12A8A0AV02 714 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 PPP1R3GB7ZBB8 358 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 MAP3K13O43283 966 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 KLKB1P03952 638 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 CORO1AP31146 461 aaKnown RBP11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 DHPSP49366 369 aaPredicted RBP11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 RGS7P49802 495 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 SLC8A3P57103 927 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 YWHAGP61981 247 aaKnown RBP eCLIP11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 ADIGQ0VDE8 80 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 PLA2G2CQ5R387 149 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 PMS2CLQ68D20 193 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 KLHDC10Q6PID8 442 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 TMEM270Q6UE05 265 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 TADA2BQ86TJ2 420 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 TMEFF1Q8IYR6 380 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 PPM1KQ8N3J5 372 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 DEFB119Q8N690 84 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 P2RY11Q96G91 374 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 FAXDC2Q96IV6 333 aa11.86□□□□□ -0.51
NIPAL3-207ENST00000488155 CEP63Q96MT8 703 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms