RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 AGO4Q9HCK5 861 aaKnown RBP5.09□□□□□ -1.59
SMC4-219ENST00000487747 VPS51Q9UID3 782 aa5.09□□□□□ -1.59
SMC4-219ENST00000487747 PAXBP1Q9Y5B6 917 aa5.09□□□□□ -1.59
SMC4-219ENST00000487747 TTBK1Q5TCY1 1321 aaPredicted RBP5.08□□□□□ -1.6
SMC4-219ENST00000487747 B4DGG1 531 aa5.08□□□□□ -1.6
SMC4-219ENST00000487747 FRS3O43559 492 aa5.08□□□□□ -1.6
SMC4-219ENST00000487747 MARCH6O60337 910 aa5.08□□□□□ -1.6
SMC4-219ENST00000487747 OAZ2O95190 189 aa5.08□□□□□ -1.6
SMC4-219ENST00000487747 FGF2P09038 288 aa5.08□□□□□ -1.6
SMC4-219ENST00000487747 TPH1P17752 444 aa5.08□□□□□ -1.6
SMC4-219ENST00000487747 ADRA1DP25100 572 aa5.08□□□□□ -1.6
SMC4-219ENST00000487747 YY1P25490 414 aa5.08□□□□□ -1.6
SMC4-219ENST00000487747 GALNSP34059 522 aa5.08□□□□□ -1.6
SMC4-219ENST00000487747 MANEALQ5VSG8 457 aa5.08□□□□□ -1.6
SMC4-219ENST00000487747 KIAA1161Q6NSJ0 714 aa5.08□□□□□ -1.6
SMC4-219ENST00000487747 FAM234AQ9H0X4 552 aa5.08□□□□□ -1.6
SMC4-219ENST00000487747 VPS45Q9NRW7 570 aa5.08□□□□□ -1.6
SMC4-219ENST00000487747 SEMA5BQ9P283 1151 aa5.08□□□□□ -1.6
SMC4-219ENST00000487747 ITGB1BP2Q9UKP3 347 aa5.08□□□□□ -1.6
SMC4-219ENST00000487747 SIRT4Q9Y6E7 314 aaPredicted RBP5.08□□□□□ -1.6
SMC4-219ENST00000487747 C2CD4BA6NLJ0 364 aa5.07□□□□□ -1.6
SMC4-219ENST00000487747 CD19P15391 556 aa5.07□□□□□ -1.6
SMC4-219ENST00000487747 TACR3P29371 465 aa5.07□□□□□ -1.6
SMC4-219ENST00000487747 HTR7P34969 479 aa5.07□□□□□ -1.6
SMC4-219ENST00000487747 CPA2P48052 419 aa5.07□□□□□ -1.6
SMC4-219ENST00000487747 COPAP53621 1224 aa5.07□□□□□ -1.6
SMC4-219ENST00000487747 PFKFB3Q16875 520 aaPredicted RBP5.07□□□□□ -1.6
SMC4-219ENST00000487747 EARS2Q5JPH6 523 aaKnown RBP5.07□□□□□ -1.6
SMC4-219ENST00000487747 TMEM63BQ5T3F8 832 aa5.07□□□□□ -1.6
SMC4-219ENST00000487747 PIM3Q86V86 326 aa5.07□□□□□ -1.6
SMC4-219ENST00000487747 FAM71DQ8N9W8 422 aa5.07□□□□□ -1.6
SMC4-219ENST00000487747 HIC2Q96JB3 615 aa5.07□□□□□ -1.6
SMC4-219ENST00000487747 TRMOQ9BU70 441 aa5.07□□□□□ -1.6
SMC4-219ENST00000487747 SAP30LQ9HAJ7 183 aa5.07□□□□□ -1.6
SMC4-219ENST00000487747 STEAP1Q9UHE8 339 aa5.07□□□□□ -1.6
SMC4-219ENST00000487747 NOTCH4Q99466 2003 aa5.07□□□□□ -1.6
SMC4-219ENST00000487747 GTPBP1O00178 669 aaKnown RBP5.06□□□□□ -1.6
SMC4-219ENST00000487747 INPPL1O15357 1258 aa5.06□□□□□ -1.6
SMC4-219ENST00000487747 PLAUP00749 431 aa5.06□□□□□ -1.6
SMC4-219ENST00000487747 MYF5P13349 255 aa5.06□□□□□ -1.6
SMC4-219ENST00000487747 EIF4A1P60842 406 aaKnown RBP5.06□□□□□ -1.6
SMC4-219ENST00000487747 CXorf57Q6NSI4 855 aaKnown RBP5.06□□□□□ -1.6
SMC4-219ENST00000487747 ZNF549Q6P9A3 640 aa5.06□□□□□ -1.6
SMC4-219ENST00000487747 UBE2Q1Q7Z7E8 422 aa5.06□□□□□ -1.6
SMC4-219ENST00000487747 MMP21Q8N119 569 aa5.06□□□□□ -1.6
SMC4-219ENST00000487747 FAM156AQ8NDB6 213 aa5.06□□□□□ -1.6
SMC4-219ENST00000487747 LRTOMTQ8WZ04 291 aa5.06□□□□□ -1.6
SMC4-219ENST00000487747 TRMT61AQ96FX7 289 aaKnown RBP5.06□□□□□ -1.6
SMC4-219ENST00000487747 SELENOOQ9BVL4 669 aa5.06□□□□□ -1.6
SMC4-219ENST00000487747 NUAK2Q9H093 628 aa5.06□□□□□ -1.6
SMC4-219ENST00000487747 DNAJB11Q9UBS4 358 aa5.06□□□□□ -1.6
SMC4-219ENST00000487747 HPSEQ9Y251 543 aa5.06□□□□□ -1.6
SMC4-219ENST00000487747 AQP7P3A6NL99 342 aa5.05□□□□□ -1.6
SMC4-219ENST00000487747 SMAD6O43541 496 aaKnown RBP5.05□□□□□ -1.6
SMC4-219ENST00000487747 TULP3O75386 442 aa5.05□□□□□ -1.6
SMC4-219ENST00000487747 MAP4K4O95819 1239 aaPredicted RBP5.05□□□□□ -1.6
SMC4-219ENST00000487747 SCGB1D2O95969 90 aa5.05□□□□□ -1.6
SMC4-219ENST00000487747 IGBP1P78318 339 aa5.05□□□□□ -1.6
SMC4-219ENST00000487747 TXNL4AP83876 142 aaKnown RBP5.05□□□□□ -1.6
SMC4-219ENST00000487747 HSF1Q00613 529 aa5.05□□□□□ -1.6
SMC4-219ENST00000487747 MTAPQ13126 283 aa5.05□□□□□ -1.6
SMC4-219ENST00000487747 ERV3-1Q14264 604 aa5.05□□□□□ -1.6
SMC4-219ENST00000487747 ST3GAL2Q16842 350 aa5.05□□□□□ -1.6
SMC4-219ENST00000487747 ARHGAP29Q52LW3 1261 aa5.05□□□□□ -1.6
SMC4-219ENST00000487747 FAM102BQ5T8I3 360 aa5.05□□□□□ -1.6
SMC4-219ENST00000487747 RNF220Q5VTB9 566 aa5.05□□□□□ -1.6
SMC4-219ENST00000487747 ZNF793Q6ZN11 406 aa5.05□□□□□ -1.6
SMC4-219ENST00000487747 YAF2Q8IY57 180 aa5.05□□□□□ -1.6
SMC4-219ENST00000487747 APIPQ96GX9 242 aa5.05□□□□□ -1.6
SMC4-219ENST00000487747 VPS50Q96JG6 964 aa5.05□□□□□ -1.6
SMC4-219ENST00000487747 FCRL5Q96RD9 977 aa5.05□□□□□ -1.6
SMC4-219ENST00000487747 FAM83DQ9H4H8 585 aa5.05□□□□□ -1.6
SMC4-219ENST00000487747 C1orf112Q9NSG2 853 aa5.05□□□□□ -1.6
SMC4-219ENST00000487747 OGDHLQ9ULD0 1010 aa5.05□□□□□ -1.6
SMC4-219ENST00000487747 MAFFQ9ULX9 164 aa5.05□□□□□ -1.6
SMC4-219ENST00000487747 SLC22A23A1A5C7 686 aa5.04□□□□□ -1.6
SMC4-219ENST00000487747 F8W8V4 182 aa5.04□□□□□ -1.6
SMC4-219ENST00000487747 SNX2O60749 519 aa5.04□□□□□ -1.6
SMC4-219ENST00000487747 TMEM225BP0DP42 221 aa5.04□□□□□ -1.6
SMC4-219ENST00000487747 RBL1P28749 1068 aa5.04□□□□□ -1.6
SMC4-219ENST00000487747 HOXA7P31268 230 aaPredicted RBP5.04□□□□□ -1.6
SMC4-219ENST00000487747 IDUAP35475 653 aa5.04□□□□□ -1.6
SMC4-219ENST00000487747 CARSP49589 748 aaKnown RBP5.04□□□□□ -1.6
SMC4-219ENST00000487747 RAE1P78406 368 aaKnown RBP5.04□□□□□ -1.6
SMC4-219ENST00000487747 CCDC15Q0P6D6 951 aa5.04□□□□□ -1.6
SMC4-219ENST00000487747 FAM110CQ1W6H9 321 aa5.04□□□□□ -1.6
SMC4-219ENST00000487747 MINDY4Q4G0A6 757 aa5.04□□□□□ -1.6
SMC4-219ENST00000487747 NGDNQ8NEJ9 315 aaKnown RBP5.04□□□□□ -1.6
SMC4-219ENST00000487747 ZNF668Q96K58 619 aaPredicted RBP5.04□□□□□ -1.6
SMC4-219ENST00000487747 LYZL4Q96KX0 146 aa5.04□□□□□ -1.6
SMC4-219ENST00000487747 HIPK2Q9H2X6 1198 aa5.04□□□□□ -1.6
SMC4-219ENST00000487747 MLXIPQ9HAP2 919 aa5.04□□□□□ -1.6
SMC4-219ENST00000487747 ZNF287Q9HBT7 754 aa5.04□□□□□ -1.6
SMC4-219ENST00000487747 SEMA4BQ9NPR2 832 aaPredicted RBP5.04□□□□□ -1.6
SMC4-219ENST00000487747 TBC1D23Q9NUY8 699 aa5.04□□□□□ -1.6
SMC4-219ENST00000487747 TMEM45AQ9NWC5 275 aa5.04□□□□□ -1.6
SMC4-219ENST00000487747 CAPN11Q9UMQ6 739 aa5.04□□□□□ -1.6
SMC4-219ENST00000487747 COL15A1P39059 1388 aa5.04□□□□□ -1.6
SMC4-219ENST00000487747 A0A1W2PPC1 479 aa5.03□□□□□ -1.6
SMC4-219ENST00000487747 FAM90A8PA6NJQ4 464 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms