RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 C8orf48Q96LL4 319 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 RNF157Q96PX1 679 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 TTPALQ9BTX7 342 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 TMEM106CQ9BVX2 250 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 OXCT2Q9BYC2 517 aaPredicted RBP9.83□□□□□ -0.84
SF3B1-211ENST00000487698 PRDM5Q9NQX1 630 aaPredicted RBP9.83□□□□□ -0.84
SF3B1-211ENST00000487698 PIGVQ9NUD9 493 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 ABI2Q9NYB9 513 aaPredicted RBP9.83□□□□□ -0.84
SF3B1-211ENST00000487698 HPCAL4Q9UM19 191 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 DRG1Q9Y295 367 aaKnown RBP9.83□□□□□ -0.84
SF3B1-211ENST00000487698 SNX24Q9Y343 169 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 PCDHB5Q9Y5E4 795 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 M0QYT0 321 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 TP73O15350 636 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 EFCAB14O75071 495 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 ITGAVP06756 1048 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 RAG1P15918 1043 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 PECAM1P16284 738 aaPredicted RBP9.83□□□□□ -0.84
SF3B1-211ENST00000487698 KLRC2P26717 231 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 GRIK1P39086 918 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 ALDH7A1P49419 539 aaKnown RBP9.83□□□□□ -0.84
SF3B1-211ENST00000487698 DYNLT1P63172 113 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 OTUD4Q01804 1114 aaKnown RBP9.83□□□□□ -0.84
SF3B1-211ENST00000487698 LMNB2Q03252 620 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 GPR17Q13304 367 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 TFDP2Q14188 446 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 KRT81Q14533 505 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 ANKRD20A8PQ5CZ79 823 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 SLC9A4Q6AI14 798 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 ANKS3Q6ZW76 656 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 FAM131BQ86XD5 332 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 TMEM199Q8N511 208 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 ALLCQ8N6M5 410 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 HAUS1Q96CS2 278 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 IGSF21Q96ID5 467 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 CCDC114Q96M63 670 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 SLC9A7Q96T83 725 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 TRIM62Q9BVG3 475 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 FAM129AQ9BZQ8 928 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 WDR6Q9NNW5 1121 aaKnown RBP9.83□□□□□ -0.84
SF3B1-211ENST00000487698 SAE1Q9UBE0 346 aaPredicted RBP9.83□□□□□ -0.84
SF3B1-211ENST00000487698 FZD10Q9ULW2 581 aa9.83□□□□□ -0.84
SF3B1-211ENST00000487698 MTMR11A4FU01 709 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 H7C4K7 107 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 CAPN9O14815 690 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 TRIM66O15016 1216 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 BAIAP3O94812 1187 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 NCAM1P13591 858 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 HSPA9P38646 679 aaKnown RBP9.82□□□□□ -0.84
SF3B1-211ENST00000487698 AIF1P55008 147 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 SCAPQ12770 1279 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 SMARCB1Q12824 385 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 BSPRYQ5W0U4 402 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 TMCO2Q7Z6W1 182 aaPredicted RBP9.82□□□□□ -0.84
SF3B1-211ENST00000487698 TTC9BQ8N6N2 239 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 PLD5Q8N7P1 536 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 TSEN2Q8NCE0 465 aaKnown RBP9.82□□□□□ -0.84
SF3B1-211ENST00000487698 PCDH19Q8TAB3 1148 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 SLC7A14Q8TBB6 771 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 ART4Q93070 314 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 NTAN1Q96AB6 310 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 KCTD15Q96SI1 283 aaPredicted RBP9.82□□□□□ -0.84
SF3B1-211ENST00000487698 DHX35Q9H5Z1 703 aaKnown RBP9.82□□□□□ -0.84
SF3B1-211ENST00000487698 IL37Q9NZH6 218 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 WHRNQ9P202 907 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 IGLV3-25P01717 112 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 CPB1P15086 417 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 TGM2P21980 687 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 GPR15P49685 360 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 DEUP1Q05D60 604 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 EIF4EBP2Q13542 120 aaPredicted RBP9.82□□□□□ -0.84
SF3B1-211ENST00000487698 NOMO1Q15155 1222 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 USP41Q3LFD5 358 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 PPP6R3Q5H9R7 873 aaPredicted RBP9.82□□□□□ -0.84
SF3B1-211ENST00000487698 SLC8B1Q6J4K2 584 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 KCNT2Q6UVM3 1135 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 SCD5Q86SK9 330 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 SCN4BQ8IWT1 228 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 CMTR2Q8IYT2 770 aaKnown RBP9.82□□□□□ -0.84
SF3B1-211ENST00000487698 SLC39A11Q8N1S5 342 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 ATAD1Q8NBU5 361 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 FBXO25Q8TCJ0 367 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 SPPL2BQ8TCT7 592 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 C2orf15Q8WU43 125 aaKnown RBP9.82□□□□□ -0.84
SF3B1-211ENST00000487698 PIK3R5Q8WYR1 880 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 EDEM1Q92611 657 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 PGLYRP2Q96PD5 576 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 MAGEB5Q9BZ81 275 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 TXLNGYQ9BZA5 131 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 CRISPLD1Q9H336 500 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 OGFRQ9NZT2 677 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 RCOR3Q9P2K3 495 aaPredicted RBP9.82□□□□□ -0.84
SF3B1-211ENST00000487698 MTRRQ9UBK8 725 aa9.82□□□□□ -0.84
SF3B1-211ENST00000487698 FAM92AA1XBS5 289 aa9.81□□□□□ -0.84
SF3B1-211ENST00000487698 I6L893 689 aaPredicted RBP9.81□□□□□ -0.84
SF3B1-211ENST00000487698 F9P00740 461 aa9.81□□□□□ -0.84
SF3B1-211ENST00000487698 ACRP10323 421 aa9.81□□□□□ -0.84
SF3B1-211ENST00000487698 CXCR3P49682 368 aa9.81□□□□□ -0.84
SF3B1-211ENST00000487698 YWHAGP61981 247 aaKnown RBP eCLIP9.81□□□□□ -0.84
SF3B1-211ENST00000487698 NME3Q13232 169 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms