RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, humanhuman

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-206ENST00000487602 KRT7P08729 469 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 RARGP13631 454 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 EPCAMP16422 314 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 IL1R2P27930 398 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 GBP1P32455 592 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 PPP3CCP48454 512 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 MARCKSL1P49006 195 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 DNA2P51530 1060 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 HDAC4P56524 1084 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 RWDD2BP57060 319 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 PITX1P78337 314 aaPredicted RBP8.35□□□□□ -1.07
RBM28-206ENST00000487602 SLC25A11Q02978 314 aaKnown RBP8.35□□□□□ -1.07
RBM28-206ENST00000487602 LRIT3Q3SXY7 679 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 BOLA3Q53S33 107 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 PPM1LQ5SGD2 360 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 OTUD1Q5VV17 481 aaPredicted RBP8.35□□□□□ -1.07
RBM28-206ENST00000487602 SNX30Q5VWJ9 437 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 MSANTD2Q6P1R3 559 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 SCYL2Q6P3W7 929 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 POLNQ7Z5Q5 900 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 ADGRD2Q7Z7M1 963 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 KATNAL2Q8IYT4 538 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 ELMOD1Q8N336 334 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 DQX1Q8TE96 717 aaKnown RBP8.35□□□□□ -1.07
RBM28-206ENST00000487602 COG1Q8WTW3 980 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 RNF139Q8WU17 664 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 ALG3Q92685 438 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 MRPL38Q96DV4 380 aaKnown RBP8.35□□□□□ -1.07
RBM28-206ENST00000487602 PGAP3Q96FM1 320 aaPredicted RBP8.35□□□□□ -1.07
RBM28-206ENST00000487602 ZNF512Q96ME7 567 aaPredicted RBP8.35□□□□□ -1.07
RBM28-206ENST00000487602 PHF12Q96QT6 1004 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 CARD9Q9H257 536 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 ZNF334Q9HCZ1 680 aaPredicted RBP8.35□□□□□ -1.07
RBM28-206ENST00000487602 OLA1Q9NTK5 396 aaKnown RBP8.35□□□□□ -1.07
RBM28-206ENST00000487602 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.35□□□□□ -1.072e-7■□□□□ 10.3
RBM28-206ENST00000487602 TMEM51Q9NW97 253 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 DDX56Q9NY93 547 aaKnown RBP8.35□□□□□ -1.07
RBM28-206ENST00000487602 TRPM5Q9NZQ8 1165 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 CALCOCO1Q9P1Z2 691 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 PCSK1NQ9UHG2 260 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 DPP7Q9UHL4 492 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 USP18Q9UMW8 372 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.35□□□□□ -1.07
RBM28-206ENST00000487602 MRFAP1Q9Y605 127 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 PATJQ8NI35 1801 aa8.35□□□□□ -1.07
RBM28-206ENST00000487602 ZNF840PA6NDX5 716 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 ZNF185O15231 689 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 CCL16O15467 120 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 CEP104O60308 925 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 ZRANB2O95218 330 aaKnown RBP eCLIP8.34□□□□□ -1.07
RBM28-206ENST00000487602 IGLV3-25P01717 112 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 F11P03951 625 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 POU2F2P09086 479 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 HNRNPA1P09651 372 aaKnown RBP eCLIP8.34□□□□□ -1.07
RBM28-206ENST00000487602 RARAP10276 462 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 HOXA9P31269 272 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 CXCR5P32302 372 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 RDXP35241 583 aaKnown RBP8.34□□□□□ -1.07
RBM28-206ENST00000487602 GJC1P36383 396 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 CXCR3P49682 368 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 ATXN1P54253 815 aaKnown RBP8.34□□□□□ -1.07
RBM28-206ENST00000487602 DEUP1Q05D60 604 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 EIF4EBP2Q13542 120 aaPredicted RBP8.34□□□□□ -1.07
RBM28-206ENST00000487602 DUSP6Q16828 381 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 WHAMMP3Q1A5X7 153 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 ATP13A4Q4VNC1 1196 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 PABPC1LQ4VXU2 614 aaKnown RBP8.34□□□□□ -1.07
RBM28-206ENST00000487602 ERMARDQ5T6L9 678 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 DCAF12L1Q5VU92 463 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 TXNRD3NBQ6F5E7 133 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 CYP4V2Q6ZWL3 525 aaPredicted RBP8.34□□□□□ -1.07
RBM28-206ENST00000487602 RSRC2Q7L4I2 434 aaKnown RBP8.34□□□□□ -1.07
RBM28-206ENST00000487602 RBM23Q86U06 439 aaKnown RBP8.34□□□□□ -1.07
RBM28-206ENST00000487602 TAC4Q86UU9 113 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 CREG2Q8IUH2 290 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 RCOR2Q8IZ40 523 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 RASGEF1CQ8N431 466 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 CMASQ8NFW8 434 aaPredicted RBP8.34□□□□□ -1.07
RBM28-206ENST00000487602 EXD1Q8NHP7 514 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 TEKT4Q8WW24 435 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 CASP10Q92851 521 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 PEBP4Q96S96 227 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 CDK5RAP1Q96SZ6 601 aaKnown RBP8.34□□□□□ -1.07
RBM28-206ENST00000487602 PSMB7Q99436 277 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 CDCA3Q99618 268 aaPredicted RBP8.34□□□□□ -1.07
RBM28-206ENST00000487602 LRRC3Q9BY71 257 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 SMOC2Q9H3U7 446 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 ZNF576Q9H609 170 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 FAM204AQ9H8W3 233 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 ZWILCHQ9H900 591 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 L2HGDHQ9H9P8 463 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 IL21Q9HBE4 155 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 WDR6Q9NNW5 1121 aaKnown RBP8.34□□□□□ -1.07
RBM28-206ENST00000487602 MAN1C1Q9NR34 630 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 DDIT4Q9NX09 232 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.34□□□□□ -1.07
RBM28-206ENST00000487602 RNF14Q9UBS8 474 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 SFMBT1Q9UHJ3 866 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 NUDT5Q9UKK9 219 aa8.34□□□□□ -1.07
RBM28-206ENST00000487602 TTC7AQ9ULT0 858 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms