RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 DNAJC9-AS1A6NH13 148 aa4.89□□□□□ -1.63
LINC00888-204ENST00000487386 PPP6CO00743 305 aa4.89□□□□□ -1.63
LINC00888-204ENST00000487386 CCNT2O60583 730 aaKnown RBP4.89□□□□□ -1.63
LINC00888-204ENST00000487386 USP1O94782 785 aa4.89□□□□□ -1.63
LINC00888-204ENST00000487386 MBPP02686 304 aaPredicted RBP4.89□□□□□ -1.63
LINC00888-204ENST00000487386 EGR1P18146 543 aa4.89□□□□□ -1.63
LINC00888-204ENST00000487386 PBX1P40424 430 aa4.89□□□□□ -1.63
LINC00888-204ENST00000487386 ABCG1P45844 678 aa4.89□□□□□ -1.63
LINC00888-204ENST00000487386 ATP1A4Q13733 1029 aa4.89□□□□□ -1.63
LINC00888-204ENST00000487386 KCNJ12Q14500 433 aa4.89□□□□□ -1.63
LINC00888-204ENST00000487386 SLC5A9Q2M3M2 681 aa4.89□□□□□ -1.63
LINC00888-204ENST00000487386 CERKLQ49MI3 558 aaPredicted RBP4.89□□□□□ -1.63
LINC00888-204ENST00000487386 AASDHQ4L235 1098 aaPredicted RBP4.89□□□□□ -1.63
LINC00888-204ENST00000487386 ZNF813Q6ZN06 617 aa4.89□□□□□ -1.63
LINC00888-204ENST00000487386 NEK8Q86SG6 692 aa4.89□□□□□ -1.63
LINC00888-204ENST00000487386 TXLNBQ8N3L3 684 aa4.89□□□□□ -1.63
LINC00888-204ENST00000487386 GALNT16Q8N428 558 aa4.89□□□□□ -1.63
LINC00888-204ENST00000487386 NGDNQ8NEJ9 315 aaKnown RBP4.89□□□□□ -1.63
LINC00888-204ENST00000487386 PRR11Q96HE9 360 aaPredicted RBP4.89□□□□□ -1.63
LINC00888-204ENST00000487386 VPS50Q96JG6 964 aa4.89□□□□□ -1.63
LINC00888-204ENST00000487386 SGCZQ96LD1 299 aa4.89□□□□□ -1.63
LINC00888-204ENST00000487386 C5orf34Q96MH7 638 aa4.89□□□□□ -1.63
LINC00888-204ENST00000487386 MYD88Q99836 296 aa4.89□□□□□ -1.63
LINC00888-204ENST00000487386 QTRT1Q9BXR0 403 aaKnown RBP4.89□□□□□ -1.63
LINC00888-204ENST00000487386 PCDHAC1Q9H158 963 aa4.89□□□□□ -1.63
LINC00888-204ENST00000487386 CHST12Q9NRB3 414 aa4.89□□□□□ -1.63
LINC00888-204ENST00000487386 VPS45Q9NRW7 570 aa4.89□□□□□ -1.63
LINC00888-204ENST00000487386 RXFP3Q9NSD7 469 aa4.89□□□□□ -1.63
LINC00888-204ENST00000487386 DHHO43323 396 aa4.88□□□□□ -1.63
LINC00888-204ENST00000487386 CA12O43570 354 aa4.88□□□□□ -1.63
LINC00888-204ENST00000487386 PRAMEF2O60811 474 aa4.88□□□□□ -1.63
LINC00888-204ENST00000487386 GCATO75600 419 aa4.88□□□□□ -1.63
LINC00888-204ENST00000487386 HMGB1P09429 215 aaKnown RBP4.88□□□□□ -1.63
LINC00888-204ENST00000487386 CYP2D6P10635 497 aa4.88□□□□□ -1.63
LINC00888-204ENST00000487386 EEF1GP26641 437 aaKnown RBP4.88□□□□□ -1.63
LINC00888-204ENST00000487386 EPHB2P29323 1055 aa4.88□□□□□ -1.63
LINC00888-204ENST00000487386 MPGP29372 298 aa4.88□□□□□ -1.63
LINC00888-204ENST00000487386 GPS1Q13098 491 aa4.88□□□□□ -1.63
LINC00888-204ENST00000487386 MAPKAPK3Q16644 382 aa4.88□□□□□ -1.63
LINC00888-204ENST00000487386 ZKSCAN2Q63HK3 967 aa4.88□□□□□ -1.63
LINC00888-204ENST00000487386 FAM90A2PQ658T7 463 aa4.88□□□□□ -1.63
LINC00888-204ENST00000487386 SVIPQ8NHG7 77 aa4.88□□□□□ -1.63
LINC00888-204ENST00000487386 SAP30LQ9HAJ7 183 aa4.88□□□□□ -1.63
LINC00888-204ENST00000487386 CYP2D7A0A087X1C5 515 aa4.87□□□□□ -1.63
LINC00888-204ENST00000487386 FAM234BA2RU67 622 aa4.87□□□□□ -1.63
LINC00888-204ENST00000487386 INO80B-WBP1J3KQ70 363 aa4.87□□□□□ -1.63
LINC00888-204ENST00000487386 HNRNPDLO14979 420 aaKnown RBP4.87□□□□□ -1.63
LINC00888-204ENST00000487386 PLA2G6O60733 806 aa4.87□□□□□ -1.63
LINC00888-204ENST00000487386 PRR35P0CG20 571 aa4.87□□□□□ -1.63
LINC00888-204ENST00000487386 TMIGD3P0DMS9 266 aaPredicted RBP4.87□□□□□ -1.63
LINC00888-204ENST00000487386 IDEP14735 1019 aa4.87□□□□□ -1.63
LINC00888-204ENST00000487386 PECAM1P16284 738 aaPredicted RBP4.87□□□□□ -1.63
LINC00888-204ENST00000487386 SFPQP23246 707 aaKnown RBP eCLIP4.87□□□□□ -1.63
LINC00888-204ENST00000487386 HSPA7P48741 367 aa4.87□□□□□ -1.63
LINC00888-204ENST00000487386 DGKQP52824 942 aa4.87□□□□□ -1.63
LINC00888-204ENST00000487386 DAZAP2Q15038 168 aaPredicted RBP4.87□□□□□ -1.63
LINC00888-204ENST00000487386 MPEG1Q2M385 716 aa4.87□□□□□ -1.63
LINC00888-204ENST00000487386 AWAT1Q58HT5 328 aa4.87□□□□□ -1.63
LINC00888-204ENST00000487386 DGKKQ5KSL6 1271 aa4.87□□□□□ -1.63
LINC00888-204ENST00000487386 TMTC4Q5T4D3 741 aa4.87□□□□□ -1.63
LINC00888-204ENST00000487386 MEX3CQ5U5Q3 659 aaKnown RBP4.87□□□□□ -1.63
LINC00888-204ENST00000487386 TLDC1Q6P9B6 456 aa4.87□□□□□ -1.63
LINC00888-204ENST00000487386 TMEM65Q6PI78 240 aa4.87□□□□□ -1.63
LINC00888-204ENST00000487386 DCDC5Q6ZRR9 648 aa4.87□□□□□ -1.63
LINC00888-204ENST00000487386 YTHDF3Q7Z739 585 aaKnown RBP4.87□□□□□ -1.63
LINC00888-204ENST00000487386 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.87□□□□□ -1.63
LINC00888-204ENST00000487386 DEPTORQ8TB45 409 aa4.87□□□□□ -1.63
LINC00888-204ENST00000487386 ZNF566Q969W8 418 aa4.87□□□□□ -1.63
LINC00888-204ENST00000487386 SH2D3AQ9BRG2 576 aa4.87□□□□□ -1.63
LINC00888-204ENST00000487386 ZNF700Q9H0M5 742 aa4.87□□□□□ -1.63
LINC00888-204ENST00000487386 ZNF804BA4D1E1 1349 aa4.87□□□□□ -1.63
LINC00888-204ENST00000487386 SPATA31A1Q5TZJ5 1347 aa4.87□□□□□ -1.63
LINC00888-204ENST00000487386 WDR17Q8IZU2 1322 aa4.87□□□□□ -1.63
LINC00888-204ENST00000487386 SMIM35A0A1B0GVV1 85 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 TMEM232C9JQI7 657 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 CLIC1O00299 241 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 KELP23276 732 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 TXNL4AP83876 142 aaKnown RBP4.86□□□□□ -1.63
LINC00888-204ENST00000487386 CCDC15Q0P6D6 951 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 KCNB1Q14721 858 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 MFSD13AQ14CX5 517 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 SEC23BQ15437 767 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 EZH2Q15910 746 aaKnown RBP4.86□□□□□ -1.63
LINC00888-204ENST00000487386 SRSF7Q16629 238 aaKnown RBP eCLIP4.86□□□□□ -1.63
LINC00888-204ENST00000487386 SUPT20HL1Q3ZLR7 823 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 ARHGAP15Q53QZ3 475 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 ZNF626Q68DY1 528 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 SLC18B1Q6NT16 456 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 RANBP10Q6VN20 620 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 C1QL2Q7Z5L3 287 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 SRLQ86TD4 932 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 CLASRPQ8N2M8 674 aaKnown RBP4.86□□□□□ -1.63
LINC00888-204ENST00000487386 FAM71DQ8N9W8 422 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 GJA10Q969M2 543 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 KIAA1191Q96A73 305 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 NUDT22Q9BRQ3 303 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 CINPQ9BW66 212 aaPredicted RBP4.86□□□□□ -1.63
LINC00888-204ENST00000487386 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.86□□□□□ -1.63
LINC00888-204ENST00000487386 CERS4Q9HA82 394 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 USP29Q9HBJ7 922 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms