RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 CGNQ9P2M7 1197 aaKnown RBP20.54■□□□□ 0.88
SMPDL3A-202ENST00000487215 HMGXB4Q9UGU5 601 aa20.54■□□□□ 0.88
SMPDL3A-202ENST00000487215 LSM7Q9UK45 103 aaKnown RBP20.54■□□□□ 0.88
SMPDL3A-202ENST00000487215 DMXL2Q8TDJ6 3036 aa20.53■□□□□ 0.88
SMPDL3A-202ENST00000487215 PPP6R2O75170 966 aa20.53■□□□□ 0.88
SMPDL3A-202ENST00000487215 NDUFS2O75306 463 aa20.53■□□□□ 0.88
SMPDL3A-202ENST00000487215 VNN1O95497 513 aa20.53■□□□□ 0.88
SMPDL3A-202ENST00000487215 C4BPAP04003 597 aaKnown RBP20.53■□□□□ 0.88
SMPDL3A-202ENST00000487215 ATP5C1P36542 298 aaKnown RBP20.53■□□□□ 0.88
SMPDL3A-202ENST00000487215 DGKGP49619 791 aa20.53■□□□□ 0.88
SMPDL3A-202ENST00000487215 AP3M2P53677 418 aa20.53■□□□□ 0.88
SMPDL3A-202ENST00000487215 CLDN10P78369 228 aa20.53■□□□□ 0.88
SMPDL3A-202ENST00000487215 SLC14A1Q13336 389 aa20.53■□□□□ 0.88
SMPDL3A-202ENST00000487215 ACAP1Q15027 740 aa20.53■□□□□ 0.88
SMPDL3A-202ENST00000487215 SHC4Q6S5L8 630 aa20.53■□□□□ 0.88
SMPDL3A-202ENST00000487215 GPRIN1Q7Z2K8 1008 aa20.53■□□□□ 0.88
SMPDL3A-202ENST00000487215 PROSER1Q86XN7 944 aa20.53■□□□□ 0.88
SMPDL3A-202ENST00000487215 PARD3BQ8TEW8 1205 aa20.53■□□□□ 0.88
SMPDL3A-202ENST00000487215 BLZF1Q9H2G9 400 aa20.53■□□□□ 0.88
SMPDL3A-202ENST00000487215 SLC39A2Q9NP94 309 aa20.53■□□□□ 0.88
SMPDL3A-202ENST00000487215 SUSD2Q9UGT4 822 aa20.53■□□□□ 0.88
SMPDL3A-202ENST00000487215 CISD3P0C7P0 127 aa20.52■□□□□ 0.88
SMPDL3A-202ENST00000487215 NDST1P52848 882 aa20.52■□□□□ 0.88
SMPDL3A-202ENST00000487215 GOLGA8FQ08AF8 430 aa20.52■□□□□ 0.88
SMPDL3A-202ENST00000487215 GOLGA8DPQ0D2H9 430 aa20.52■□□□□ 0.88
SMPDL3A-202ENST00000487215 TRIP6Q15654 476 aaKnown RBP20.52■□□□□ 0.88
SMPDL3A-202ENST00000487215 KNOP1Q1ED39 458 aaKnown RBP20.52■□□□□ 0.88
SMPDL3A-202ENST00000487215 KIAA1324Q6UXG2 1013 aaKnown RBP20.52■□□□□ 0.88
SMPDL3A-202ENST00000487215 CRYBG2Q8N1P7 616 aa20.52■□□□□ 0.88
SMPDL3A-202ENST00000487215 FOXJ1Q92949 421 aa20.52■□□□□ 0.88
SMPDL3A-202ENST00000487215 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.52■□□□□ 0.88
SMPDL3A-202ENST00000487215 FAM49BQ9NUQ9 324 aa20.52■□□□□ 0.88
SMPDL3A-202ENST00000487215 TFIP11Q9UBB9 837 aaKnown RBP20.52■□□□□ 0.88
SMPDL3A-202ENST00000487215 WASH3PC4AMC7 463 aa20.51■□□□□ 0.87
SMPDL3A-202ENST00000487215 GFRA2O00451 464 aa20.51■□□□□ 0.87
SMPDL3A-202ENST00000487215 MDM4O15151 490 aa20.51■□□□□ 0.87
SMPDL3A-202ENST00000487215 CYP26A1O43174 497 aa20.51■□□□□ 0.87
SMPDL3A-202ENST00000487215 MAOBP27338 520 aa20.51■□□□□ 0.87
SMPDL3A-202ENST00000487215 GRIK2Q13002 908 aa20.51■□□□□ 0.87
SMPDL3A-202ENST00000487215 SYCP2LQ5T4T6 812 aa20.51■□□□□ 0.87
SMPDL3A-202ENST00000487215 NAXDQ8IW45 347 aa20.51■□□□□ 0.87
SMPDL3A-202ENST00000487215 C12orf29Q8N999 325 aa20.51■□□□□ 0.87
SMPDL3A-202ENST00000487215 ADAMTS14Q8WXS8 1223 aa20.51■□□□□ 0.87
SMPDL3A-202ENST00000487215 BHMTQ93088 406 aa20.51■□□□□ 0.87
SMPDL3A-202ENST00000487215 P2RY11Q96G91 374 aa20.51■□□□□ 0.87
SMPDL3A-202ENST00000487215 MAGEF1Q9HAY2 307 aa20.51■□□□□ 0.87
SMPDL3A-202ENST00000487215 NMUR1Q9HB89 426 aa20.51■□□□□ 0.87
SMPDL3A-202ENST00000487215 SCML2Q9UQR0 700 aa20.51■□□□□ 0.87
SMPDL3A-202ENST00000487215 STX6O43752 255 aa20.5■□□□□ 0.87
SMPDL3A-202ENST00000487215 CUTAO60888 179 aa20.5■□□□□ 0.87
SMPDL3A-202ENST00000487215 FTH1P19P0C7X4 201 aa20.5■□□□□ 0.87
SMPDL3A-202ENST00000487215 FAM200BP0CF97 657 aa20.5■□□□□ 0.87
SMPDL3A-202ENST00000487215 P4HA1P13674 534 aa20.5■□□□□ 0.87
SMPDL3A-202ENST00000487215 GNSP15586 552 aa20.5■□□□□ 0.87
SMPDL3A-202ENST00000487215 ADORA2BP29275 332 aa20.5■□□□□ 0.87
SMPDL3A-202ENST00000487215 CD6P30203 668 aa20.5■□□□□ 0.87
SMPDL3A-202ENST00000487215 SCAPQ12770 1279 aa20.5■□□□□ 0.87
SMPDL3A-202ENST00000487215 WDR45BQ5MNZ6 344 aa20.5■□□□□ 0.87
SMPDL3A-202ENST00000487215 Q6ZNB5 142 aa20.5■□□□□ 0.87
SMPDL3A-202ENST00000487215 UNC93AQ86WB7 457 aa20.5■□□□□ 0.87
SMPDL3A-202ENST00000487215 JAKMIP2Q96AA8 810 aa20.5■□□□□ 0.87
SMPDL3A-202ENST00000487215 INTS4Q96HW7 963 aaKnown RBP20.5■□□□□ 0.87
SMPDL3A-202ENST00000487215 FOXD4L1Q9NU39 408 aa20.5■□□□□ 0.87
SMPDL3A-202ENST00000487215 PLK2Q9NYY3 685 aa20.5■□□□□ 0.87
SMPDL3A-202ENST00000487215 NUDT5Q9UKK9 219 aa20.5■□□□□ 0.87
SMPDL3A-202ENST00000487215 PCDHB9Q9Y5E1 797 aa20.5■□□□□ 0.87
SMPDL3A-202ENST00000487215 STON1Q9Y6Q2 735 aa20.5■□□□□ 0.87
SMPDL3A-202ENST00000487215 A0A1W2PQH9 124 aa20.49■□□□□ 0.87
SMPDL3A-202ENST00000487215 HHLA1C9JL84 531 aa20.49■□□□□ 0.87
SMPDL3A-202ENST00000487215 POLR2DO15514 142 aaKnown RBP20.49■□□□□ 0.87
SMPDL3A-202ENST00000487215 RARGP13631 454 aa20.49■□□□□ 0.87
SMPDL3A-202ENST00000487215 DLG4P78352 724 aa20.49■□□□□ 0.87
SMPDL3A-202ENST00000487215 SGSM1Q2NKQ1 1148 aa20.49■□□□□ 0.87
SMPDL3A-202ENST00000487215 FUT11Q495W5 492 aa20.49■□□□□ 0.87
SMPDL3A-202ENST00000487215 KLHDC10Q6PID8 442 aa20.49■□□□□ 0.87
SMPDL3A-202ENST00000487215 CLEC20AQ6ZU45 233 aa20.49■□□□□ 0.87
SMPDL3A-202ENST00000487215 PNPLA1Q8N8W4 532 aa20.49■□□□□ 0.87
SMPDL3A-202ENST00000487215 GOLGA5Q8TBA6 731 aa20.49■□□□□ 0.87
SMPDL3A-202ENST00000487215 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.49■□□□□ 0.87
SMPDL3A-202ENST00000487215 FBXO10Q9UK96 956 aa20.49■□□□□ 0.87
SMPDL3A-202ENST00000487215 FREM2Q5SZK8 3169 aa20.49■□□□□ 0.87
SMPDL3A-202ENST00000487215 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.48■□□□□ 0.87
SMPDL3A-202ENST00000487215 PVALEFA0A1B0GWK0 134 aa20.48■□□□□ 0.87
SMPDL3A-202ENST00000487215 MEI4A8MW99 385 aa20.48■□□□□ 0.87
SMPDL3A-202ENST00000487215 YEATS4O95619 227 aa20.48■□□□□ 0.87
SMPDL3A-202ENST00000487215 ACO1P21399 889 aaKnown RBP20.48■□□□□ 0.87
SMPDL3A-202ENST00000487215 ASPAP45381 313 aa20.48■□□□□ 0.87
SMPDL3A-202ENST00000487215 PLA2G4AP47712 749 aa20.48■□□□□ 0.87
SMPDL3A-202ENST00000487215 CUL4BQ13620 913 aa20.48■□□□□ 0.87
SMPDL3A-202ENST00000487215 ZACNQ401N2 412 aa20.48■□□□□ 0.87
SMPDL3A-202ENST00000487215 SPOPLQ6IQ16 392 aa20.48■□□□□ 0.87
SMPDL3A-202ENST00000487215 METTL3Q86U44 580 aaKnown RBP20.48■□□□□ 0.87
SMPDL3A-202ENST00000487215 DNASE2BQ8WZ79 361 aa20.48■□□□□ 0.87
SMPDL3A-202ENST00000487215 TOE1Q96GM8 510 aaKnown RBP20.48■□□□□ 0.87
SMPDL3A-202ENST00000487215 ZNF396Q96N95 335 aaPredicted RBP20.48■□□□□ 0.87
SMPDL3A-202ENST00000487215 TWNKQ96RR1 684 aa20.48■□□□□ 0.87
SMPDL3A-202ENST00000487215 HNRNPABQ99729 332 aaKnown RBP20.48■□□□□ 0.87
SMPDL3A-202ENST00000487215 ZDHHC5Q9C0B5 715 aa20.48■□□□□ 0.87
SMPDL3A-202ENST00000487215 DMAC2Q9NW81 257 aa20.48■□□□□ 0.87
SMPDL3A-202ENST00000487215 WSB2Q9NYS7 404 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms