RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 FBN2P35556 2912 aa6.83□□□□□ -1.32
CTDSPL-208ENST00000486978 ATP8B3O60423 1300 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 SPENQ96T58 3664 aaKnown RBP6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 TMEM131Q92545 1883 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 TRIM66O15016 1216 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 OPHN1O60890 802 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 TADA3O75528 432 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 KRT38O76015 456 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 WISP1O95388 367 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 HLA-DRAP01903 254 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 CFIP05156 583 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 TRIM49P0CI25 452 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 TRIM49CP0CI26 452 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 P4HA1P13674 534 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 ANXA13P27216 316 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 RDXP35241 583 aaKnown RBP6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 AVPR1AP37288 418 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 GRIK1P39086 918 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 PRCPP42785 496 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 CDH8P55286 799 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 CLDN6P56747 220 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 GRSF1Q12849 480 aaKnown RBP eCLIP6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 RUNX3Q13761 415 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 USP39Q53GS9 565 aaKnown RBP6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 C1orf220Q5T0J3 134 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 ZNF658Q5TYW1 1059 aaPredicted RBP6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 TXNDC8Q6A555 127 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 ANO7Q6IWH7 933 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 SCARA5Q6ZMJ2 495 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 FMNL3Q8IVF7 1028 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 ELOA2Q8IYF1 753 aaPredicted RBP6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 MAB21L3Q8N8X9 362 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 B3GALNT2Q8NCR0 500 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 SPATA20Q8TB22 786 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 BPIFB1Q8TDL5 484 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 SMARCE1Q969G3 411 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 TNIP3Q96KP6 325 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 C8orf48Q96LL4 319 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 FCRL3Q96P31 734 aaPredicted RBP6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 TSG101Q99816 390 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 SLC46A2Q9BY10 475 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 IMPG2Q9BZV3 1241 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 ELOVL4Q9GZR5 314 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 SDCBP2Q9H190 292 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 DPEP3Q9H4B8 488 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 KIF9Q9HAQ2 790 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 PLSCR2Q9NRY7 297 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 THG1LQ9NWX6 298 aaKnown RBP6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 CCL26Q9Y258 94 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 PCDHA5Q9Y5H7 936 aa6.82□□□□□ -1.32
CTDSPL-208ENST00000486978 F8VP50 259 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 CLDN5O00501 218 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 TNFRSF10BO14763 440 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 CETN3O15182 167 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 DKK1O94907 266 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 ASS1P00966 412 aaKnown RBP6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 ATXN1LP0C7T5 689 aaKnown RBP6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 EPB41P11171 864 aaKnown RBP6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 HOXB1P14653 301 aaPredicted RBP6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 GTF2H1P32780 548 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 P2RY2P41231 377 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 GCLMP48507 274 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 MCCD1P59942 119 aaPredicted RBP6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 NOP14P78316 857 aaKnown RBP6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 PLCB2Q00722 1185 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 PPP3CAQ08209 521 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 MESP2Q0VG99 397 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 DSG2Q14126 1118 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 LY6DQ14210 128 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 ZNF268Q14587 947 aaPredicted RBP6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 MAP7D1Q3KQU3 841 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 SPOPLQ6IQ16 392 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 DENND5BQ6ZUT9 1274 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 FAM35AQ86V20 835 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 MON1AQ86VX9 555 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 NAXDQ8IW45 347 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 HDDC3Q8N4P3 179 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 CCDC33Q8N5R6 958 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 LSM14AQ8ND56 463 aaKnown RBP6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 TSTD1Q8NFU3 115 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 TAS1R2Q8TE23 839 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 ERCC4Q92889 916 aaPredicted RBP6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 USP13Q92995 863 aaPredicted RBP6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 ELMO3Q96BJ8 720 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 TTLL2Q9BWV7 592 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 B3GNT5Q9BYG0 378 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 ZNF518BQ9C0D4 1074 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 TMEM8AQ9HCN3 771 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 ZDHHC4Q9NPG8 344 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 TDP1Q9NUW8 608 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 DNAAF2Q9NVR5 837 aaKnown RBP6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 EHD2Q9NZN4 543 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 SLC6A14Q9UN76 642 aa6.81□□□□□ -1.32
CTDSPL-208ENST00000486978 KNTC1P50748 2209 aa6.8□□□□□ -1.32
CTDSPL-208ENST00000486978 TRAV19A0A0A6YYK7 116 aa6.8□□□□□ -1.32
CTDSPL-208ENST00000486978 K7EQS6 105 aa6.8□□□□□ -1.32
CTDSPL-208ENST00000486978 ARHGAP33O14559 1287 aa6.8□□□□□ -1.32
CTDSPL-208ENST00000486978 PSMA7O14818 248 aa6.8□□□□□ -1.32
CTDSPL-208ENST00000486978 SLC16A3O15427 465 aaKnown RBP6.8□□□□□ -1.32
CTDSPL-208ENST00000486978 STX10O60499 249 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms