RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 SCAPQ12770 1279 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 BYSLQ13895 437 aaKnown RBP5.84□□□□□ -1.47
COPS3-209ENST00000486810 PLCB4Q15147 1175 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 TIGD2Q4W5G0 525 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 PLEKHO1Q53GL0 409 aaPredicted RBP5.84□□□□□ -1.47
COPS3-209ENST00000486810 CFAP157Q5JU67 520 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 SPECC1Q5M775 1068 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 SLC10A5Q5PT55 438 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 C10orf62Q5T681 223 aaPredicted RBP5.84□□□□□ -1.47
COPS3-209ENST00000486810 FCRLBQ6BAA4 426 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 GALNT17Q6IS24 598 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 INTS8Q75QN2 995 aaKnown RBP5.84□□□□□ -1.47
COPS3-209ENST00000486810 RASGRP2Q7LDG7 609 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 NLRP9Q7RTR0 991 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 MAATS1Q7Z4T9 603 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 LDLRAD3Q86YD5 345 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 WDR75Q8IWA0 830 aaKnown RBP5.84□□□□□ -1.47
COPS3-209ENST00000486810 ITPRIPQ8IWB1 547 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 ULK2Q8IYT8 1036 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 SPARTQ8N0X7 666 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 TMEM132CQ8N3T6 1108 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 FITM2Q8N6M3 262 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 TRIML2Q8N7C3 387 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 NKAIN3Q8N8D7 197 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 Q8NA96 180 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 TBC1D15Q8TC07 691 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 SPATA18Q8TC71 538 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 JPH3Q8WXH2 748 aaPredicted RBP5.84□□□□□ -1.47
COPS3-209ENST00000486810 ARHGEF2Q92974 986 aaKnown RBP5.84□□□□□ -1.47
COPS3-209ENST00000486810 SH3KBP1Q96B97 665 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 GIMAP5Q96F15 307 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 SORCS2Q96PQ0 1159 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 NUP88Q99567 741 aaPredicted RBP5.84□□□□□ -1.47
COPS3-209ENST00000486810 CCT7Q99832 543 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 TLR10Q9BXR5 811 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 DNAI2Q9GZS0 605 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 NSRP1Q9H0G5 558 aaKnown RBP5.84□□□□□ -1.47
COPS3-209ENST00000486810 PLEKHA5Q9HAU0 1116 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 AIPL1Q9NZN9 384 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 ANKFY1Q9P2R3 1169 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 SCAF8Q9UPN6 1271 aaKnown RBP5.84□□□□□ -1.47
COPS3-209ENST00000486810 SATB2Q9UPW6 733 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 C2CD2Q9Y426 696 aa5.84□□□□□ -1.47
COPS3-209ENST00000486810 COL4A3Q01955 1670 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 CLRN2A0PK11 232 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 HTR3EA5X5Y0 456 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 UNC119BA6NIH7 251 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 HNRNPCL2B2RXH8 293 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 MCF2LO15068 1137 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 NVLO15381 856 aaKnown RBP5.83□□□□□ -1.48
COPS3-209ENST00000486810 HNRNPCL1O60812 293 aaKnown RBP5.83□□□□□ -1.48
COPS3-209ENST00000486810 HAUS5O94927 633 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 AGFG2O95081 481 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 ALDH2P05091 517 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 ADH4P08319 380 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 SPATA31D3P0C874 917 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 GZMAP12544 262 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 POLR2EP19388 210 aaKnown RBP5.83□□□□□ -1.48
COPS3-209ENST00000486810 MAP2K6P52564 334 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 EPHB1P54762 984 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 HSD11B2P80365 405 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 HSPA14Q0VDF9 509 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 RESTQ13127 1097 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 TP53BP2Q13625 1128 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 ZNF267Q14586 743 aaPredicted RBP5.83□□□□□ -1.48
COPS3-209ENST00000486810 NAA25Q14CX7 972 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 SHROOM1Q2M3G4 852 aaPredicted RBP5.83□□□□□ -1.48
COPS3-209ENST00000486810 ATAT1Q5SQI0 421 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 SLC4A10Q6U841 1118 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 PCSK4Q6UW60 755 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 GADL1Q6ZQY3 521 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 SPATA31D4Q6ZUB0 917 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 VRK3Q8IV63 474 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 ARHGEF19Q8IW93 802 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 TPH2Q8IWU9 490 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 SYCP3Q8IZU3 236 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 VPS52Q8N1B4 723 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 AADATQ8N5Z0 425 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 AMER2Q8N7J2 671 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 USP38Q8NB14 1042 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 DEPTORQ8TB45 409 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 NELL1Q92832 810 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 NRBF2Q96F24 287 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 PSKH2Q96QS6 385 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 NR1H4Q96RI1 486 aaPredicted RBP5.83□□□□□ -1.48
COPS3-209ENST00000486810 SMC6Q96SB8 1091 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 TSC22D3Q99576 134 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 VCPKMTQ9H867 229 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 CYP4F11Q9HBI6 524 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 CD93Q9NPY3 652 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 MIS18AQ9NYP9 233 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 JKAMPQ9P055 326 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 ZNF180Q9UJW8 692 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 FBXO2Q9UK22 296 aaPredicted RBP5.83□□□□□ -1.48
COPS3-209ENST00000486810 TTC7AQ9ULT0 858 aaPredicted RBP5.83□□□□□ -1.48
COPS3-209ENST00000486810 CNPY2Q9Y2B0 182 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 R3HDM2Q9Y2K5 976 aaKnown RBP5.83□□□□□ -1.48
COPS3-209ENST00000486810 SH3GLB1Q9Y371 365 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 PCDHA3Q9Y5H8 950 aa5.83□□□□□ -1.48
COPS3-209ENST00000486810 BAZ1AQ9NRL2 1556 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms