RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 ABCC13Q9NSE7 274 aa19.07■□□□□ 0.64
COL1A1-207ENST00000486572 MARCH2Q9P0N8 246 aa19.07■□□□□ 0.64
COL1A1-207ENST00000486572 CYTH4Q9UIA0 394 aa19.07■□□□□ 0.64
COL1A1-207ENST00000486572 TRDMT1O14717 391 aaKnown RBP19.06■□□□□ 0.64
COL1A1-207ENST00000486572 EPHB6O15197 1021 aa19.06■□□□□ 0.64
COL1A1-207ENST00000486572 GREM1O60565 184 aa19.06■□□□□ 0.64
COL1A1-207ENST00000486572 CAVIN2O95810 425 aa19.06■□□□□ 0.64
COL1A1-207ENST00000486572 ADH1CP00326 375 aa19.06■□□□□ 0.64
COL1A1-207ENST00000486572 CHRNB1P11230 501 aa19.06■□□□□ 0.64
COL1A1-207ENST00000486572 CYP11B1P15538 503 aa19.06■□□□□ 0.64
COL1A1-207ENST00000486572 COG7P83436 770 aa19.06■□□□□ 0.64
COL1A1-207ENST00000486572 TCF15Q12870 199 aa19.06■□□□□ 0.64
COL1A1-207ENST00000486572 DHCR24Q15392 516 aa19.06■□□□□ 0.64
COL1A1-207ENST00000486572 NEK11Q8NG66 645 aa19.06■□□□□ 0.64
COL1A1-207ENST00000486572 EDEM1Q92611 657 aa19.06■□□□□ 0.64
COL1A1-207ENST00000486572 LMAN1LQ9HAT1 526 aa19.06■□□□□ 0.64
COL1A1-207ENST00000486572 CBX8Q9HC52 389 aa19.06■□□□□ 0.64
COL1A1-207ENST00000486572 E5RJQ4 531 aa19.05■□□□□ 0.64
COL1A1-207ENST00000486572 STC2O76061 302 aa19.05■□□□□ 0.64
COL1A1-207ENST00000486572 LTFP02788 710 aa19.05■□□□□ 0.64
COL1A1-207ENST00000486572 GRSF1Q12849 480 aaKnown RBP eCLIP19.05■□□□□ 0.64
COL1A1-207ENST00000486572 CCINQ13939 588 aa19.05■□□□□ 0.64
COL1A1-207ENST00000486572 TMEM196Q5HYL7 178 aa19.05■□□□□ 0.64
COL1A1-207ENST00000486572 DGKKQ5KSL6 1271 aa19.05■□□□□ 0.64
COL1A1-207ENST00000486572 TMEM110Q86TL2 294 aa19.05■□□□□ 0.64
COL1A1-207ENST00000486572 SCUBE3Q8IX30 993 aa19.05■□□□□ 0.64
COL1A1-207ENST00000486572 NOX5Q96PH1 765 aa19.05■□□□□ 0.64
COL1A1-207ENST00000486572 SPAG5Q96R06 1193 aa19.05■□□□□ 0.64
COL1A1-207ENST00000486572 P2RY13Q9BPV8 354 aa19.05■□□□□ 0.64
COL1A1-207ENST00000486572 IER2Q9BTL4 223 aa19.05■□□□□ 0.64
COL1A1-207ENST00000486572 CHRDQ9H2X0 955 aa19.05■□□□□ 0.64
COL1A1-207ENST00000486572 NLRC4Q9NPP4 1024 aa19.05■□□□□ 0.64
COL1A1-207ENST00000486572 SPATA6Q9NWH7 488 aaPredicted RBP19.05■□□□□ 0.64
COL1A1-207ENST00000486572 CEP83Q9Y592 693 aa19.05■□□□□ 0.64
COL1A1-207ENST00000486572 SLC12A8A0AV02 714 aa19.04■□□□□ 0.64
COL1A1-207ENST00000486572 ADH5P11766 374 aa19.04■□□□□ 0.64
COL1A1-207ENST00000486572 JAM2P57087 298 aa19.04■□□□□ 0.64
COL1A1-207ENST00000486572 TPM4P67936 248 aa19.04■□□□□ 0.64
COL1A1-207ENST00000486572 ANGPT1Q15389 498 aa19.04■□□□□ 0.64
COL1A1-207ENST00000486572 FILIP1LQ4L180 1135 aa19.04■□□□□ 0.64
COL1A1-207ENST00000486572 LY6G5CQ5SRR4 150 aa19.04■□□□□ 0.64
COL1A1-207ENST00000486572 NAIF1Q69YI7 327 aaPredicted RBP19.04■□□□□ 0.64
COL1A1-207ENST00000486572 RHBDF2Q6PJF5 856 aa19.04■□□□□ 0.64
COL1A1-207ENST00000486572 Q6ZNB5 142 aa19.04■□□□□ 0.64
COL1A1-207ENST00000486572 LUZP1Q86V48 1076 aa19.04■□□□□ 0.64
COL1A1-207ENST00000486572 C1orf210Q8IVY1 113 aa19.04■□□□□ 0.64
COL1A1-207ENST00000486572 WDTC1Q8N5D0 677 aa19.04■□□□□ 0.64
COL1A1-207ENST00000486572 C1orf131Q8NDD1 294 aaKnown RBP19.04■□□□□ 0.64
COL1A1-207ENST00000486572 CD101Q93033 1021 aa19.04■□□□□ 0.64
COL1A1-207ENST00000486572 IRF2BPLQ9H1B7 796 aa19.04■□□□□ 0.64
COL1A1-207ENST00000486572 PDCL3Q9H2J4 239 aa19.04■□□□□ 0.64
COL1A1-207ENST00000486572 RTN4Q9NQC3 1192 aaKnown RBP19.04■□□□□ 0.64
COL1A1-207ENST00000486572 RBM12Q9NTZ6 932 aaKnown RBP19.04■□□□□ 0.64
COL1A1-207ENST00000486572 H0Y858 1186 aa19.03■□□□□ 0.64
COL1A1-207ENST00000486572 PAPSS1O43252 624 aaPredicted RBP19.03■□□□□ 0.64
COL1A1-207ENST00000486572 GFPT2O94808 682 aa19.03■□□□□ 0.64
COL1A1-207ENST00000486572 HMBSP08397 361 aa19.03■□□□□ 0.64
COL1A1-207ENST00000486572 SOX5P35711 763 aa19.03■□□□□ 0.64
COL1A1-207ENST00000486572 GALK1P51570 392 aa19.03■□□□□ 0.64
COL1A1-207ENST00000486572 GAB4Q2WGN9 574 aa19.03■□□□□ 0.64
COL1A1-207ENST00000486572 FSTL4Q6MZW2 842 aa19.03■□□□□ 0.64
COL1A1-207ENST00000486572 MSANTD2Q6P1R3 559 aa19.03■□□□□ 0.64
COL1A1-207ENST00000486572 NOP9Q86U38 636 aaKnown RBP19.03■□□□□ 0.64
COL1A1-207ENST00000486572 FMNL3Q8IVF7 1028 aa19.03■□□□□ 0.64
COL1A1-207ENST00000486572 SYNPOQ8N3V7 929 aa19.03■□□□□ 0.64
COL1A1-207ENST00000486572 EPS8L1Q8TE68 723 aa19.03■□□□□ 0.64
COL1A1-207ENST00000486572 FAM149B1Q96BN6 582 aa19.03■□□□□ 0.64
COL1A1-207ENST00000486572 PLD4Q96BZ4 506 aa19.03■□□□□ 0.64
COL1A1-207ENST00000486572 PPP1R13BQ96KQ4 1090 aa19.03■□□□□ 0.64
COL1A1-207ENST00000486572 CPXM1Q96SM3 734 aa19.03■□□□□ 0.64
COL1A1-207ENST00000486572 TRIM62Q9BVG3 475 aa19.03■□□□□ 0.64
COL1A1-207ENST00000486572 DCLK3Q9C098 648 aa19.03■□□□□ 0.64
COL1A1-207ENST00000486572 SPHK2Q9NRA0 654 aa19.03■□□□□ 0.64
COL1A1-207ENST00000486572 ZNF510Q9Y2H8 683 aa19.03■□□□□ 0.64
COL1A1-207ENST00000486572 HBS1LQ9Y450 684 aaKnown RBP19.03■□□□□ 0.64
COL1A1-207ENST00000486572 TEX33O43247 280 aa19.02■□□□□ 0.64
COL1A1-207ENST00000486572 LAMTOR5O43504 91 aa19.02■□□□□ 0.64
COL1A1-207ENST00000486572 DRD1P21728 446 aa19.02■□□□□ 0.64
COL1A1-207ENST00000486572 CORO1AP31146 461 aaKnown RBP19.02■□□□□ 0.64
COL1A1-207ENST00000486572 OPRD1P41143 372 aa19.02■□□□□ 0.64
COL1A1-207ENST00000486572 STAT1P42224 750 aa19.02■□□□□ 0.64
COL1A1-207ENST00000486572 SNX16P57768 344 aa19.02■□□□□ 0.64
COL1A1-207ENST00000486572 GAD2Q05329 585 aa19.02■□□□□ 0.64
COL1A1-207ENST00000486572 MTAPQ13126 283 aa19.02■□□□□ 0.64
COL1A1-207ENST00000486572 TAF3Q5VWG9 929 aa19.02■□□□□ 0.64
COL1A1-207ENST00000486572 TMEM35BQ8NCS4 154 aa19.02■□□□□ 0.64
COL1A1-207ENST00000486572 IPO4Q8TEX9 1081 aaKnown RBP19.02■□□□□ 0.64
COL1A1-207ENST00000486572 DDX1Q92499 740 aaKnown RBP19.02■□□□□ 0.64
COL1A1-207ENST00000486572 FBRSL1Q9HCM7 1045 aaKnown RBP19.02■□□□□ 0.64
COL1A1-207ENST00000486572 TJP2Q9UDY2 1190 aa19.02■□□□□ 0.64
COL1A1-207ENST00000486572 SFMBT1Q9UHJ3 866 aa19.02■□□□□ 0.64
COL1A1-207ENST00000486572 WDFY4Q6ZS81 3184 aa19.02■□□□□ 0.64
COL1A1-207ENST00000486572 A0A1B0GTH6 734 aa19.01■□□□□ 0.63
COL1A1-207ENST00000486572 GOLGA6L19H0YKK7 550 aa19.01■□□□□ 0.63
COL1A1-207ENST00000486572 HOXC11O43248 304 aaPredicted RBP19.01■□□□□ 0.63
COL1A1-207ENST00000486572 LSM8O95777 96 aaKnown RBP19.01■□□□□ 0.63
COL1A1-207ENST00000486572 SERPINC1P01008 464 aa19.01■□□□□ 0.63
COL1A1-207ENST00000486572 KLKB1P03952 638 aa19.01■□□□□ 0.63
COL1A1-207ENST00000486572 NCAM1P13591 858 aa19.01■□□□□ 0.63
COL1A1-207ENST00000486572 CDH5P33151 784 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms