RNA–Protein interactions for RNA: ENST00000486549.5

USP4-212, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 749 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-212ENST00000486549 SOX5P35711 763 aa15.46■□□□□ 0.07
USP4-212ENST00000486549 NBL1P41271 181 aa15.46■□□□□ 0.07
USP4-212ENST00000486549 ACADSBP45954 432 aa15.46■□□□□ 0.07
USP4-212ENST00000486549 JAM2P57087 298 aa15.46■□□□□ 0.07
USP4-212ENST00000486549 PON2Q15165 354 aa15.46■□□□□ 0.07
USP4-212ENST00000486549 SMYD5Q6GMV2 418 aa15.46■□□□□ 0.07
USP4-212ENST00000486549 KLHDC10Q6PID8 442 aa15.46■□□□□ 0.07
USP4-212ENST00000486549 NOP9Q86U38 636 aaKnown RBP15.46■□□□□ 0.07
USP4-212ENST00000486549 BBS7Q8IWZ6 715 aa15.46■□□□□ 0.07
USP4-212ENST00000486549 SCUBE3Q8IX30 993 aa15.46■□□□□ 0.07
USP4-212ENST00000486549 SCML4Q8N228 414 aa15.46■□□□□ 0.07
USP4-212ENST00000486549 RNF139Q8WU17 664 aa15.46■□□□□ 0.07
USP4-212ENST00000486549 IRGQQ8WZA9 623 aa15.46■□□□□ 0.07
USP4-212ENST00000486549 MSANTD3Q96H12 275 aa15.46■□□□□ 0.07
USP4-212ENST00000486549 NAP1L5Q96NT1 182 aaPredicted RBP15.46■□□□□ 0.07
USP4-212ENST00000486549 SLC4A5Q9BY07 1137 aa15.46■□□□□ 0.07
USP4-212ENST00000486549 SEMA4AQ9H3S1 761 aa15.46■□□□□ 0.07
USP4-212ENST00000486549 TSPY26PQ9H489 355 aa15.46■□□□□ 0.07
USP4-212ENST00000486549 ABCC13Q9NSE7 274 aa15.46■□□□□ 0.07
USP4-212ENST00000486549 MARCH2Q9P0N8 246 aa15.46■□□□□ 0.07
USP4-212ENST00000486549 TJP2Q9UDY2 1190 aa15.46■□□□□ 0.07
USP4-212ENST00000486549 LSM7Q9UK45 103 aaKnown RBP15.46■□□□□ 0.07
USP4-212ENST00000486549 STRIP2Q9ULQ0 834 aa15.46■□□□□ 0.07
USP4-212ENST00000486549 DAAM1Q9Y4D1 1078 aa15.46■□□□□ 0.07
USP4-212ENST00000486549 CEP83Q9Y592 693 aa15.46■□□□□ 0.07
USP4-212ENST00000486549 MYOFQ9NZM1 2061 aa15.46■□□□□ 0.07
USP4-212ENST00000486549 A0A1B0GTH6 734 aa15.45■□□□□ 0.06
USP4-212ENST00000486549 SLC12A8A0AV02 714 aa15.45■□□□□ 0.06
USP4-212ENST00000486549 LTFP02788 710 aa15.45■□□□□ 0.06
USP4-212ENST00000486549 GJA4P35212 333 aa15.45■□□□□ 0.06
USP4-212ENST00000486549 STAT1P42224 750 aa15.45■□□□□ 0.06
USP4-212ENST00000486549 MLLT6P55198 1093 aaPredicted RBP15.45■□□□□ 0.06
USP4-212ENST00000486549 FANCCQ00597 558 aa15.45■□□□□ 0.06
USP4-212ENST00000486549 NR1H3Q13133 447 aa15.45■□□□□ 0.06
USP4-212ENST00000486549 ANGPT1Q15389 498 aa15.45■□□□□ 0.06
USP4-212ENST00000486549 ZC3H14Q6PJT7 736 aaKnown RBP15.45■□□□□ 0.06
USP4-212ENST00000486549 CACNA2D4Q7Z3S7 1137 aa15.45■□□□□ 0.06
USP4-212ENST00000486549 ZNF276Q8N554 614 aa15.45■□□□□ 0.06
USP4-212ENST00000486549 WDTC1Q8N5D0 677 aa15.45■□□□□ 0.06
USP4-212ENST00000486549 STK32AQ8WU08 396 aa15.45■□□□□ 0.06
USP4-212ENST00000486549 FAM149B1Q96BN6 582 aa15.45■□□□□ 0.06
USP4-212ENST00000486549 PPP1R13BQ96KQ4 1090 aa15.45■□□□□ 0.06
USP4-212ENST00000486549 NOX5Q96PH1 765 aa15.45■□□□□ 0.06
USP4-212ENST00000486549 CPXM1Q96SM3 734 aa15.45■□□□□ 0.06
USP4-212ENST00000486549 LHX5Q9H2C1 402 aa15.45■□□□□ 0.06
USP4-212ENST00000486549 SYNCQ9H7C4 482 aa15.45■□□□□ 0.06
USP4-212ENST00000486549 OLA1Q9NTK5 396 aaKnown RBP15.45■□□□□ 0.06
USP4-212ENST00000486549 TBC1D14Q9P2M4 693 aa15.45■□□□□ 0.06
USP4-212ENST00000486549 PAPSS1O43252 624 aaPredicted RBP15.44■□□□□ 0.06
USP4-212ENST00000486549 CYP17A1P05093 508 aa15.44■□□□□ 0.06
USP4-212ENST00000486549 MMEP08473 750 aa15.44■□□□□ 0.06
USP4-212ENST00000486549 RPL34P49207 117 aaKnown RBP15.44■□□□□ 0.06
USP4-212ENST00000486549 ARID5AQ03989 594 aa15.44■□□□□ 0.06
USP4-212ENST00000486549 NAIF1Q69YI7 327 aaPredicted RBP15.44■□□□□ 0.06
USP4-212ENST00000486549 LRSAM1Q6UWE0 723 aa15.44■□□□□ 0.06
USP4-212ENST00000486549 FMNL3Q8IVF7 1028 aa15.44■□□□□ 0.06
USP4-212ENST00000486549 KIAA1958Q8N8K9 716 aa15.44■□□□□ 0.06
USP4-212ENST00000486549 EPS8L1Q8TE68 723 aa15.44■□□□□ 0.06
USP4-212ENST00000486549 IPO4Q8TEX9 1081 aaKnown RBP15.44■□□□□ 0.06
USP4-212ENST00000486549 SLC20A1Q8WUM9 679 aa15.44■□□□□ 0.06
USP4-212ENST00000486549 CHFRQ96EP1 664 aa15.44■□□□□ 0.06
USP4-212ENST00000486549 SFMBT1Q9UHJ3 866 aa15.44■□□□□ 0.06
USP4-212ENST00000486549 CACNA1HO95180 2353 aa15.44■□□□□ 0.06
USP4-212ENST00000486549 SART1O43290 800 aaKnown RBP15.43■□□□□ 0.06
USP4-212ENST00000486549 MSI1O43347 362 aaKnown RBP15.43■□□□□ 0.06
USP4-212ENST00000486549 GFRA3O60609 400 aa15.43■□□□□ 0.06
USP4-212ENST00000486549 STC2O76061 302 aa15.43■□□□□ 0.06
USP4-212ENST00000486549 NCAM1P13591 858 aa15.43■□□□□ 0.06
USP4-212ENST00000486549 COG7P83436 770 aa15.43■□□□□ 0.06
USP4-212ENST00000486549 AMPD2Q01433 879 aa15.43■□□□□ 0.06
USP4-212ENST00000486549 DHCR24Q15392 516 aa15.43■□□□□ 0.06
USP4-212ENST00000486549 LY6G5CQ5SRR4 150 aa15.43■□□□□ 0.06
USP4-212ENST00000486549 HTR3DQ70Z44 454 aa15.43■□□□□ 0.06
USP4-212ENST00000486549 TMEM110Q86TL2 294 aa15.43■□□□□ 0.06
USP4-212ENST00000486549 C1orf210Q8IVY1 113 aa15.43■□□□□ 0.06
USP4-212ENST00000486549 ADGRG2Q8IZP9 1017 aa15.43■□□□□ 0.06
USP4-212ENST00000486549 TMEM35BQ8NCS4 154 aa15.43■□□□□ 0.06
USP4-212ENST00000486549 DDX1Q92499 740 aaKnown RBP15.43■□□□□ 0.06
USP4-212ENST00000486549 NKD2Q969F2 451 aaPredicted RBP15.43■□□□□ 0.06
USP4-212ENST00000486549 PIWIL1Q96J94 861 aaKnown RBP15.43■□□□□ 0.06
USP4-212ENST00000486549 IER2Q9BTL4 223 aa15.43■□□□□ 0.06
USP4-212ENST00000486549 LMAN1LQ9HAT1 526 aa15.43■□□□□ 0.06
USP4-212ENST00000486549 RBM12Q9NTZ6 932 aaKnown RBP15.43■□□□□ 0.06
USP4-212ENST00000486549 DLGAP2Q9P1A6 1054 aa15.43■□□□□ 0.06
USP4-212ENST00000486549 NOCTQ9UK39 431 aaKnown RBP15.43■□□□□ 0.06
USP4-212ENST00000486549 CAPN9O14815 690 aa15.42■□□□□ 0.06
USP4-212ENST00000486549 GREM1O60565 184 aa15.42■□□□□ 0.06
USP4-212ENST00000486549 ADH1CP00326 375 aa15.42■□□□□ 0.06
USP4-212ENST00000486549 ERBB2P04626 1255 aa15.42■□□□□ 0.06
USP4-212ENST00000486549 ADH5P11766 374 aa15.42■□□□□ 0.06
USP4-212ENST00000486549 CORO1AP31146 461 aaKnown RBP15.42■□□□□ 0.06
USP4-212ENST00000486549 UBASH3AP57075 661 aa15.42■□□□□ 0.06
USP4-212ENST00000486549 ANO4Q32M45 955 aa15.42■□□□□ 0.06
USP4-212ENST00000486549 PTPN20Q4JDL3 420 aa15.42■□□□□ 0.06
USP4-212ENST00000486549 OR6B2Q6IFH4 312 aa15.42■□□□□ 0.06
USP4-212ENST00000486549 RHBDF2Q6PJF5 856 aa15.42■□□□□ 0.06
USP4-212ENST00000486549 FAM183BPQ6ZVS7 135 aa15.42■□□□□ 0.06
USP4-212ENST00000486549 ZNF687Q8N1G0 1237 aa15.42■□□□□ 0.06
USP4-212ENST00000486549 RNF214Q8ND24 703 aa15.42■□□□□ 0.06
USP4-212ENST00000486549 OTUB2Q96DC9 234 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms