RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 DCLK2Q8N568 766 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 GBP7Q8N8V2 638 aaPredicted RBP4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 TNIP2Q8NFZ5 429 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 RUBCNQ92622 972 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 USP13Q92995 863 aaPredicted RBP4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 KIF1BPQ96EK5 621 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 RADILQ96JH8 1075 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 C8orf76Q96K31 380 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 CCDC43Q96MW1 224 aaKnown RBP4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 COG8Q96MW5 612 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 TIGD1Q96MW7 591 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 PI4K2AQ9BTU6 479 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 FSD1Q9BTV5 496 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 SLC7A5P2Q9GIP4 190 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 TRPV4Q9HBA0 871 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 INTS10Q9NVR2 710 aaKnown RBP4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 ETAA1Q9NY74 926 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 ZHX1Q9UKY1 873 aaPredicted RBP4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 SSX2IPQ9Y2D8 614 aa4.54□□□□□ -1.68
R3HDM1-217ENST00000486532 ZNF804BA4D1E1 1349 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 SOS1Q07889 1333 aaPredicted RBP4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 SALL3Q9BXA9 1300 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 H7C0S8 307 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 MPPED1O15442 326 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 DIAPH2O60879 1101 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 SNUPNO95149 360 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 MATN4O95460 622 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 EYA4O95677 639 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 CD4P01730 458 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 SLC4A1P02730 911 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 S100A6P06703 90 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 VIMP08670 466 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 GSPT1P15170 499 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 ARF4P18085 180 aaPredicted RBP4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 GPD1P21695 349 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 S100A5P33763 92 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 MTHFRP42898 656 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 MATR3P43243 847 aaKnown RBP eCLIP4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 FOXF2Q12947 444 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 STRN3Q13033 797 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 SCARB2Q14108 478 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 TRIM14Q14142 442 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 COG2Q14746 738 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 POSTNQ15063 836 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 PAPD7Q5XG87 772 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 FCRLBQ6BAA4 426 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 XRRA1Q6P2D8 792 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 TLDC1Q6P9B6 456 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 PLEKHM3Q6ZWE6 761 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 INTS8Q75QN2 995 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 KCNK18Q7Z418 384 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 PPP1R42Q7Z4L9 355 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 GALNTL5Q7Z4T8 443 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 EFCAB13Q8IY85 973 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 NRSN1Q8IZ57 195 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 SPERTQ8NA61 448 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 CTCFLQ8NI51 663 aaPredicted RBP4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 CCHCR1Q8TD31 782 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 OTUD7AQ8TE49 926 aaPredicted RBP4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 SSH3Q8TE77 659 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 DENND1AQ8TEH3 1009 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 DIS3LQ8TF46 1054 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 SSH1Q8WYL5 1049 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 HOXB13Q92826 284 aaPredicted RBP4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 LTV1Q96GA3 475 aaPredicted RBP4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 C1orf74Q96LT6 269 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 CEP295NLQ96MC4 621 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 ASB2Q96Q27 587 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 TIMP4Q99727 224 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 BARD1Q99728 777 aaKnown RBP4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 HERC2P3Q9BVR0 1158 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 CAPS2Q9BXY5 557 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 NT5C3AQ9H0P0 336 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 VCX3BQ9H321 246 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 MROH8Q9H579 483 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 TCF7L1Q9HCS4 588 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 ARFGAP3Q9NP61 516 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 PPP1R14DQ9NXH3 145 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 ZNF624Q9P2J8 865 aaPredicted RBP4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 HDAC6Q9UBN7 1215 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 EXTL2Q9UBQ6 330 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 ITGB1BP2Q9UKP3 347 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 GRID1Q9ULK0 1009 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 HPCAL4Q9UM19 191 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 COG5Q9UP83 839 aa4.53□□□□□ -1.68
R3HDM1-217ENST00000486532 AATKQ6ZMQ8 1374 aa4.53□□□□□ -1.69
R3HDM1-217ENST00000486532 TRIM75PA6NK02 468 aa4.52□□□□□ -1.69
R3HDM1-217ENST00000486532 F5H0A9 414 aaPredicted RBP4.52□□□□□ -1.69
R3HDM1-217ENST00000486532 SLC7A4O43246 635 aa4.52□□□□□ -1.69
R3HDM1-217ENST00000486532 FRS3O43559 492 aa4.52□□□□□ -1.69
R3HDM1-217ENST00000486532 TGDSO95455 350 aa4.52□□□□□ -1.69
R3HDM1-217ENST00000486532 IL33O95760 270 aa4.52□□□□□ -1.69
R3HDM1-217ENST00000486532 OPN1MWP04001 364 aa4.52□□□□□ -1.69
R3HDM1-217ENST00000486532 DNTTP04053 509 aa4.52□□□□□ -1.69
R3HDM1-217ENST00000486532 PYGLP06737 847 aa4.52□□□□□ -1.69
R3HDM1-217ENST00000486532 OPN1MW2P0DN77 364 aa4.52□□□□□ -1.69
R3HDM1-217ENST00000486532 OPN1MW3P0DN78 364 aa4.52□□□□□ -1.69
R3HDM1-217ENST00000486532 GZMAP12544 262 aa4.52□□□□□ -1.69
R3HDM1-217ENST00000486532 WT1P19544 449 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms