RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 ADH5P11766 374 aa9.77□□□□□ -0.85
CCDC142-208ENST00000486335 ZNF18P17022 549 aa9.77□□□□□ -0.85
CCDC142-208ENST00000486335 PFKLP17858 780 aa9.77□□□□□ -0.85
CCDC142-208ENST00000486335 BDNFP23560 247 aa9.77□□□□□ -0.85
CCDC142-208ENST00000486335 PGFP49763 221 aa9.77□□□□□ -0.85
CCDC142-208ENST00000486335 TPM4P67936 248 aa9.77□□□□□ -0.85
CCDC142-208ENST00000486335 POU5F1Q01860 360 aaKnown RBP9.77□□□□□ -0.85
CCDC142-208ENST00000486335 KCNA1Q09470 495 aa9.77□□□□□ -0.85
CCDC142-208ENST00000486335 MYO1EQ12965 1108 aa9.77□□□□□ -0.85
CCDC142-208ENST00000486335 SMAD1Q15797 465 aaKnown RBP9.77□□□□□ -0.85
CCDC142-208ENST00000486335 PTPRNQ16849 979 aa9.77□□□□□ -0.85
CCDC142-208ENST00000486335 BMT2Q1RMZ1 405 aa9.77□□□□□ -0.85
CCDC142-208ENST00000486335 TTI2Q6NXR4 508 aa9.77□□□□□ -0.85
CCDC142-208ENST00000486335 ZNF720Q7Z2F6 126 aa9.77□□□□□ -0.85
CCDC142-208ENST00000486335 ZNF513Q8N8E2 541 aaPredicted RBP9.77□□□□□ -0.85
CCDC142-208ENST00000486335 ZNF507Q8TCN5 953 aa9.77□□□□□ -0.85
CCDC142-208ENST00000486335 KCNV2Q8TDN2 545 aa9.77□□□□□ -0.85
CCDC142-208ENST00000486335 IPO4Q8TEX9 1081 aaKnown RBP9.77□□□□□ -0.85
CCDC142-208ENST00000486335 NELFBQ8WX92 580 aa9.77□□□□□ -0.85
CCDC142-208ENST00000486335 HPS3Q969F9 1004 aa9.77□□□□□ -0.85
CCDC142-208ENST00000486335 FUBP3Q96I24 572 aaKnown RBP eCLIP9.77□□□□□ -0.85
CCDC142-208ENST00000486335 MRGPRX1Q96LB2 322 aa9.77□□□□□ -0.85
CCDC142-208ENST00000486335 ST6GALNAC4Q9H4F1 302 aa9.77□□□□□ -0.85
CCDC142-208ENST00000486335 ZHX3Q9H4I2 956 aa9.77□□□□□ -0.85
CCDC142-208ENST00000486335 PARVGQ9HBI0 331 aa9.77□□□□□ -0.85
CCDC142-208ENST00000486335 FANCLQ9NW38 375 aa9.77□□□□□ -0.85
CCDC142-208ENST00000486335 LARSQ9P2J5 1176 aaKnown RBP9.77□□□□□ -0.85
CCDC142-208ENST00000486335 AGAP1Q9UPQ3 857 aa9.77□□□□□ -0.85
CCDC142-208ENST00000486335 APOBEC2Q9Y235 224 aaKnown RBP9.77□□□□□ -0.85
CCDC142-208ENST00000486335 NFE2L3Q9Y4A8 694 aa9.77□□□□□ -0.85
CCDC142-208ENST00000486335 PCDHB9Q9Y5E1 797 aa9.77□□□□□ -0.85
CCDC142-208ENST00000486335 RAD54BQ9Y620 910 aa9.77□□□□□ -0.85
CCDC142-208ENST00000486335 MYH11P35749 1972 aa9.76□□□□□ -0.85
CCDC142-208ENST00000486335 BICDL2A1A5D9 508 aa9.76□□□□□ -0.85
CCDC142-208ENST00000486335 TBC1D3BA6NDS4 549 aa9.76□□□□□ -0.85
CCDC142-208ENST00000486335 KCNJ18B7U540 433 aa9.76□□□□□ -0.85
CCDC142-208ENST00000486335 ATXN7O15265 892 aaPredicted RBP9.76□□□□□ -0.85
CCDC142-208ENST00000486335 EIF3DO15371 548 aaKnown RBP eCLIP9.76□□□□□ -0.85
CCDC142-208ENST00000486335 HOXC11O43248 304 aaPredicted RBP9.76□□□□□ -0.85
CCDC142-208ENST00000486335 TLX3O43711 291 aaPredicted RBP9.76□□□□□ -0.85
CCDC142-208ENST00000486335 TBCAO75347 108 aaKnown RBP9.76□□□□□ -0.85
CCDC142-208ENST00000486335 PPP1R37O75864 691 aa9.76□□□□□ -0.85
CCDC142-208ENST00000486335 FAM13AO94988 1023 aa9.76□□□□□ -0.85
CCDC142-208ENST00000486335 CISD3P0C7P0 127 aa9.76□□□□□ -0.85
CCDC142-208ENST00000486335 NTSR1P30989 418 aa9.76□□□□□ -0.85
CCDC142-208ENST00000486335 DEKP35659 375 aaKnown RBP9.76□□□□□ -0.85
CCDC142-208ENST00000486335 PSMC1P62191 440 aaKnown RBP9.76□□□□□ -0.85
CCDC142-208ENST00000486335 LRRC63Q05C16 580 aa9.76□□□□□ -0.85
CCDC142-208ENST00000486335 SV2CQ496J9 727 aa9.76□□□□□ -0.85
CCDC142-208ENST00000486335 CDKAL1Q5VV42 579 aa9.76□□□□□ -0.85
CCDC142-208ENST00000486335 LMBRD2Q68DH5 695 aaPredicted RBP9.76□□□□□ -0.85
CCDC142-208ENST00000486335 RABEPKQ7Z6M1 372 aa9.76□□□□□ -0.85
CCDC142-208ENST00000486335 SFR1Q86XK3 245 aa9.76□□□□□ -0.85
CCDC142-208ENST00000486335 BBS7Q8IWZ6 715 aa9.76□□□□□ -0.85
CCDC142-208ENST00000486335 MYCT1Q8N699 235 aa9.76□□□□□ -0.85
CCDC142-208ENST00000486335 TERB1Q8NA31 727 aa9.76□□□□□ -0.85
CCDC142-208ENST00000486335 SCFD1Q8WVM8 642 aa9.76□□□□□ -0.85
CCDC142-208ENST00000486335 ANP32BQ92688 251 aaKnown RBP9.76□□□□□ -0.85
CCDC142-208ENST00000486335 MYLPFQ96A32 169 aa9.76□□□□□ -0.85
CCDC142-208ENST00000486335 PDLIM2Q96JY6 352 aa9.76□□□□□ -0.85
CCDC142-208ENST00000486335 UBL7Q96S82 380 aaPredicted RBP9.76□□□□□ -0.85
CCDC142-208ENST00000486335 PPP1R9BQ96SB3 815 aa9.76□□□□□ -0.85
CCDC142-208ENST00000486335 GABRG3Q99928 467 aa9.76□□□□□ -0.85
CCDC142-208ENST00000486335 WSB2Q9NYS7 404 aaPredicted RBP9.76□□□□□ -0.85
CCDC142-208ENST00000486335 AGO2Q9UKV8 859 aaKnown RBP9.76□□□□□ -0.85
CCDC142-208ENST00000486335 MAPK8IP1Q9UQF2 711 aa9.76□□□□□ -0.85
CCDC142-208ENST00000486335 COL6A6A6NMZ7 2263 aa9.76□□□□□ -0.85
CCDC142-208ENST00000486335 NUMA1Q14980 2115 aa9.76□□□□□ -0.85
CCDC142-208ENST00000486335 ATMQ13315 3056 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 H0YCG3 227 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 K7ENM7 598 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 TRIM66O15016 1216 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 COCHO43405 550 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 CILPO75339 1184 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 ITGB3P05106 788 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 ZNF883P0CG24 379 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 HOXB2P14652 356 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 SCP2P22307 547 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 HOXD13P35453 343 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 PMS1P54277 932 aaKnown RBP9.75□□□□□ -0.85
CCDC142-208ENST00000486335 CLDN6P56747 220 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 NOP14P78316 857 aaKnown RBP9.75□□□□□ -0.85
CCDC142-208ENST00000486335 TAF10Q12962 218 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 ALCAMQ13740 583 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 HLA-BQ31612 363 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 ZCWPW2Q504Y3 356 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 KCNT1Q5JUK3 1230 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 ANKRD40Q6AI12 368 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 KLHL10Q6JEL2 608 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 VSTM1Q6UX27 236 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 DENND5BQ6ZUT9 1274 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 SPATA2LQ8IUW3 424 aaPredicted RBP9.75□□□□□ -0.85
CCDC142-208ENST00000486335 TMEM86AQ8N2M4 240 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 TOP6BLQ8N6T0 577 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 PIP4K2CQ8TBX8 421 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 NOC3LQ8WTT2 800 aaKnown RBP9.75□□□□□ -0.85
CCDC142-208ENST00000486335 TMEM174Q8WUU8 243 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 PCED1BQ96HM7 432 aa9.75□□□□□ -0.85
CCDC142-208ENST00000486335 DUSP9Q99956 384 aaKnown RBP9.75□□□□□ -0.85
CCDC142-208ENST00000486335 KCTD10Q9H3F6 313 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms