RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 TSPAN18Q96SJ8 248 aa8.83□□□□□ -1
XRN1-212ENST00000486211 PYM1Q9BRP8 204 aaKnown RBP8.83□□□□□ -1
XRN1-212ENST00000486211 MKRN2Q9H000 416 aaKnown RBP8.83□□□□□ -1
XRN1-212ENST00000486211 TMEM60Q9H2L4 133 aa8.83□□□□□ -1
XRN1-212ENST00000486211 OSGEPQ9NPF4 335 aa8.83□□□□□ -1
XRN1-212ENST00000486211 STARD5Q9NSY2 213 aa8.83□□□□□ -1
XRN1-212ENST00000486211 SMPD4Q9NXE4 827 aa8.83□□□□□ -1
XRN1-212ENST00000486211 CFAP97Q9P2B7 532 aa8.83□□□□□ -1
XRN1-212ENST00000486211 DEC1Q9P2X7 70 aa8.83□□□□□ -1
XRN1-212ENST00000486211 RBM19Q9Y4C8 960 aaKnown RBP8.83□□□□□ -1
XRN1-212ENST00000486211 DOPEY1Q5JWR5 2465 aa8.83□□□□□ -1
XRN1-212ENST00000486211 ZNF840PA6NDX5 716 aa8.82□□□□□ -1
XRN1-212ENST00000486211 WASH3PC4AMC7 463 aa8.82□□□□□ -1
XRN1-212ENST00000486211 PRRT4C9JH25 899 aa8.82□□□□□ -1
XRN1-212ENST00000486211 K7ENP7 123 aa8.82□□□□□ -1
XRN1-212ENST00000486211 CLDN3O15551 220 aa8.82□□□□□ -1
XRN1-212ENST00000486211 NEMFO60524 1076 aa8.82□□□□□ -1
XRN1-212ENST00000486211 OAS1P00973 400 aaKnown RBP8.82□□□□□ -1
XRN1-212ENST00000486211 MYF5P13349 255 aa8.82□□□□□ -1
XRN1-212ENST00000486211 GLDCP23378 1020 aa8.82□□□□□ -1
XRN1-212ENST00000486211 PDIA5Q14554 519 aa8.82□□□□□ -1
XRN1-212ENST00000486211 FUT11Q495W5 492 aa8.82□□□□□ -1
XRN1-212ENST00000486211 CFAP221Q4G0U5 840 aa8.82□□□□□ -1
XRN1-212ENST00000486211 JADE1Q6IE81 842 aa8.82□□□□□ -1
XRN1-212ENST00000486211 SDE2Q6IQ49 451 aa8.82□□□□□ -1
XRN1-212ENST00000486211 INO80CQ6PI98 192 aaPredicted RBP8.82□□□□□ -1
XRN1-212ENST00000486211 ZPBP2Q6X784 338 aa8.82□□□□□ -1
XRN1-212ENST00000486211 GATAD2AQ86YP4 633 aa8.82□□□□□ -1
XRN1-212ENST00000486211 KCNB2Q92953 911 aa8.82□□□□□ -1
XRN1-212ENST00000486211 DRC1Q96MC2 740 aa8.82□□□□□ -1
XRN1-212ENST00000486211 PSMG3-AS1Q96PY0 264 aa8.82□□□□□ -1
XRN1-212ENST00000486211 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.82□□□□□ -1
XRN1-212ENST00000486211 BHMT2Q9H2M3 363 aa8.82□□□□□ -1
XRN1-212ENST00000486211 TM9SF3Q9HD45 589 aa8.82□□□□□ -1
XRN1-212ENST00000486211 KMT5AQ9NQR1 393 aa8.82□□□□□ -1
XRN1-212ENST00000486211 TBC1D14Q9P2M4 693 aa8.82□□□□□ -1
XRN1-212ENST00000486211 BOD1L1Q8NFC6 3051 aa8.82□□□□□ -1
XRN1-212ENST00000486211 CREBBPQ92793 2442 aa8.82□□□□□ -1
XRN1-212ENST00000486211 ABCA12Q86UK0 2595 aa8.81□□□□□ -1
XRN1-212ENST00000486211 A0A1B0GTQ1 180 aa8.81□□□□□ -1
XRN1-212ENST00000486211 GFRA2O00451 464 aa8.81□□□□□ -1
XRN1-212ENST00000486211 SLC16A4O15374 487 aa8.81□□□□□ -1
XRN1-212ENST00000486211 KLK10O43240 276 aa8.81□□□□□ -1
XRN1-212ENST00000486211 HIP1RO75146 1068 aa8.81□□□□□ -1
XRN1-212ENST00000486211 LDOC1O95751 146 aaPredicted RBP8.81□□□□□ -1
XRN1-212ENST00000486211 RPS6KB1P23443 525 aa8.81□□□□□ -1
XRN1-212ENST00000486211 OXTRP30559 389 aa8.81□□□□□ -1
XRN1-212ENST00000486211 GRIK1P39086 918 aa8.81□□□□□ -1
XRN1-212ENST00000486211 TAF6P49848 677 aa8.81□□□□□ -1
XRN1-212ENST00000486211 TSPY1Q01534 308 aa8.81□□□□□ -1
XRN1-212ENST00000486211 SHBQ15464 509 aa8.81□□□□□ -1
XRN1-212ENST00000486211 INTS6LQ5JSJ4 861 aaKnown RBP8.81□□□□□ -1
XRN1-212ENST00000486211 BTBD8Q5XKL5 378 aa8.81□□□□□ -1
XRN1-212ENST00000486211 TMEM25Q86YD3 366 aa8.81□□□□□ -1
XRN1-212ENST00000486211 KCNE4Q8WWG9 221 aa8.81□□□□□ -1
XRN1-212ENST00000486211 OTUB2Q96DC9 234 aa8.81□□□□□ -1
XRN1-212ENST00000486211 JAKMIP1Q96N16 626 aaKnown RBP8.81□□□□□ -1
XRN1-212ENST00000486211 NTPCRQ9BSD7 190 aaKnown RBP8.81□□□□□ -1
XRN1-212ENST00000486211 PCED1AQ9H1Q7 454 aa8.81□□□□□ -1
XRN1-212ENST00000486211 SRPK3Q9UPE1 567 aa8.81□□□□□ -1
XRN1-212ENST00000486211 CLCA2Q9UQC9 943 aa8.81□□□□□ -1
XRN1-212ENST00000486211 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.81□□□□□ -1
XRN1-212ENST00000486211 PAXBP1Q9Y5B6 917 aa8.81□□□□□ -1
XRN1-212ENST00000486211 PCDHB1Q9Y5F3 818 aa8.81□□□□□ -1
XRN1-212ENST00000486211 BSNQ9UPA5 3926 aa8.81□□□□□ -1
XRN1-212ENST00000486211 TCHHQ07283 1943 aa8.8□□□□□ -1
XRN1-212ENST00000486211 MAPTP10636 758 aaKnown RBP8.8□□□□□ -1
XRN1-212ENST00000486211 ITGB6P18564 788 aa8.8□□□□□ -1
XRN1-212ENST00000486211 MUTP22033 750 aa8.8□□□□□ -1
XRN1-212ENST00000486211 ACAT1P24752 427 aaKnown RBP8.8□□□□□ -1
XRN1-212ENST00000486211 MAGEA11P43364 429 aa8.8□□□□□ -1
XRN1-212ENST00000486211 ILKQ13418 452 aa8.8□□□□□ -1
XRN1-212ENST00000486211 TEAD4Q15561 434 aa8.8□□□□□ -1
XRN1-212ENST00000486211 LINC00303Q3SY05 128 aa8.8□□□□□ -1
XRN1-212ENST00000486211 GRAMD4Q6IC98 578 aa8.8□□□□□ -1
XRN1-212ENST00000486211 BLOC1S2Q6QNY1 142 aa8.8□□□□□ -1
XRN1-212ENST00000486211 BBS7Q8IWZ6 715 aa8.8□□□□□ -1
XRN1-212ENST00000486211 LINC00528Q8N1L1 170 aa8.8□□□□□ -1
XRN1-212ENST00000486211 PDCL2Q8N4E4 241 aa8.8□□□□□ -1
XRN1-212ENST00000486211 TMEM161BQ8NDZ6 487 aa8.8□□□□□ -1
XRN1-212ENST00000486211 SAP25Q8TEE9 199 aa8.8□□□□□ -1
XRN1-212ENST00000486211 SNX19Q92543 992 aa8.8□□□□□ -1
XRN1-212ENST00000486211 SPATA17Q96L03 361 aa8.8□□□□□ -1
XRN1-212ENST00000486211 DUSP9Q99956 384 aaKnown RBP8.8□□□□□ -1
XRN1-212ENST00000486211 ACBD6Q9BR61 282 aa8.8□□□□□ -1
XRN1-212ENST00000486211 ORAI3Q9BRQ5 295 aa8.8□□□□□ -1
XRN1-212ENST00000486211 NUP58Q9BVL2 599 aa8.8□□□□□ -1
XRN1-212ENST00000486211 TTLL2Q9BWV7 592 aa8.8□□□□□ -1
XRN1-212ENST00000486211 DPH1Q9BZG8 443 aa8.8□□□□□ -1
XRN1-212ENST00000486211 TRIM9Q9C026 710 aa8.8□□□□□ -1
XRN1-212ENST00000486211 C6orf106Q9H6K1 298 aaPredicted RBP8.8□□□□□ -1
XRN1-212ENST00000486211 RPF1Q9H9Y2 349 aaKnown RBP8.8□□□□□ -1
XRN1-212ENST00000486211 ASCL3Q9NQ33 180 aa8.8□□□□□ -1
XRN1-212ENST00000486211 SPHK2Q9NRA0 654 aa8.8□□□□□ -1
XRN1-212ENST00000486211 TRPM5Q9NZQ8 1165 aa8.8□□□□□ -1
XRN1-212ENST00000486211 LRWD1Q9UFC0 647 aa8.8□□□□□ -1
XRN1-212ENST00000486211 GTF3C4Q9UKN8 822 aa8.8□□□□□ -1
XRN1-212ENST00000486211 MAN2B2Q9Y2E5 1009 aa8.8□□□□□ -1
XRN1-212ENST00000486211 PCDHB6Q9Y5E3 794 aa8.8□□□□□ -1
XRN1-212ENST00000486211 TP53BP1Q12888 1972 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms