RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 GRSF1Q12849 480 aaKnown RBP eCLIP9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 USP4Q13107 963 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 PPP2R5DQ14738 602 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 SPA17Q15506 151 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 SNRNP35Q16560 246 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 EXOC3L4Q17RC7 722 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 DUOXA2Q1HG44 320 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 CFAP221Q4G0U5 840 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 TCEAL6Q6IPX3 200 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 CC2D1AQ6P1N0 951 aaPredicted RBP9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 TRIM65Q6PJ69 517 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 WDR59Q6PJI9 974 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 CEP68Q76N32 757 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 RPLP0P6Q8NHW5 317 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 OSCP1Q8WVF1 389 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 SECISBP2LQ93073 1101 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 TCEAL3Q969E4 200 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 WBP2Q969T9 261 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 SLC35C1Q96A29 364 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 TRMT2BQ96GJ1 504 aaKnown RBP9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 P2RY13Q9BPV8 354 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 B3GNT5Q9BYG0 378 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 TSGA10Q9BZW7 698 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 ZNF518BQ9C0D4 1074 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 SDCBP2Q9H190 292 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 KIAA1586Q9HCI6 787 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 ABCB6Q9NP58 842 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 FAM207AQ9NSI2 230 aaPredicted RBP9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 SMPD4Q9NXE4 827 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 CDH9Q9ULB4 789 aa9.93□□□□□ -0.82
TMEM39A-208ENST00000486159 SDK1Q7Z5N4 2213 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 TRAV19A0A0A6YYK7 116 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 PRR5-ARHGAP8B1AHC4 643 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 K7EQS6 105 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 LEFTY2O00292 366 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 EXOC3O60645 756 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 LCA5LO95447 670 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 ABL1P00519 1130 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 USP17L7P0C7H9 530 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 PTPN1P18031 435 aaKnown RBP9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 TNNI1P19237 187 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 PCSK1P29120 753 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 GNL1P36915 607 aaPredicted RBP9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 OPRD1P41143 372 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 IFNAR2P48551 515 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 ARHGAP8P85298 464 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 LMNB2Q03252 620 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 MYO1EQ12965 1108 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 ORC1Q13415 861 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 ZNF268Q14587 947 aaPredicted RBP9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 CSRP2Q16527 193 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 EMC10Q5UCC4 262 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 SFMBT2Q5VUG0 894 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 SMYD5Q6GMV2 418 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 PAQR9Q6ZVX9 377 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 C12orf40Q86WS4 652 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 WDR49Q8IV35 697 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 FRMD1Q8N878 549 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 XXYLT1Q8NBI6 393 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 OR6B3Q8NGW1 331 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 GAB3Q8WWW8 586 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 BAP1Q92560 729 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 CCDC42Q96M95 316 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 KCNK16Q96T55 309 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 CGRRF1Q99675 332 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 LSM14BQ9BX40 385 aaKnown RBP9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 XYLT2Q9H1B5 865 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 SMYD3Q9H7B4 428 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 L2HGDHQ9H9P8 463 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 NHEJ1Q9H9Q4 299 aaPredicted RBP9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 KIF9Q9HAQ2 790 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 AIPL1Q9NZN9 384 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 NXF1Q9UBU9 619 aaKnown RBP9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 SLC8A2Q9UPR5 921 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 PCDHGA4Q9Y5G9 962 aa9.92□□□□□ -0.82
TMEM39A-208ENST00000486159 ATP8B3O60423 1300 aa9.91□□□□□ -0.82
TMEM39A-208ENST00000486159 UQCRHLA0A096LP55 91 aa9.91□□□□□ -0.82
TMEM39A-208ENST00000486159 ZNF840PA6NDX5 716 aa9.91□□□□□ -0.82
TMEM39A-208ENST00000486159 SLC30A4O14863 429 aa9.91□□□□□ -0.82
TMEM39A-208ENST00000486159 KRT86O43790 486 aa9.91□□□□□ -0.82
TMEM39A-208ENST00000486159 RPP40O75818 363 aaKnown RBP9.91□□□□□ -0.82
TMEM39A-208ENST00000486159 GFPT2O94808 682 aa9.91□□□□□ -0.82
TMEM39A-208ENST00000486159 VNN1O95497 513 aa9.91□□□□□ -0.82
TMEM39A-208ENST00000486159 SERPING1P05155 500 aa9.91□□□□□ -0.82
TMEM39A-208ENST00000486159 UQCRHP07919 91 aa9.91□□□□□ -0.82
TMEM39A-208ENST00000486159 CCDC172P0C7W6 258 aa9.91□□□□□ -0.82
TMEM39A-208ENST00000486159 CASQ1P31415 396 aa9.91□□□□□ -0.82
TMEM39A-208ENST00000486159 GTF2H1P32780 548 aa9.91□□□□□ -0.82
TMEM39A-208ENST00000486159 MAGEA11P43364 429 aa9.91□□□□□ -0.82
TMEM39A-208ENST00000486159 GNG11P61952 73 aa9.91□□□□□ -0.82
TMEM39A-208ENST00000486159 TUBB4BP68371 445 aa9.91□□□□□ -0.82
TMEM39A-208ENST00000486159 DLG4P78352 724 aa9.91□□□□□ -0.82
TMEM39A-208ENST00000486159 TAF10Q12962 218 aa9.91□□□□□ -0.82
TMEM39A-208ENST00000486159 PSMD6Q15008 389 aa9.91□□□□□ -0.82
TMEM39A-208ENST00000486159 PDGFRLQ15198 375 aa9.91□□□□□ -0.82
TMEM39A-208ENST00000486159 WDR72Q3MJ13 1102 aa9.91□□□□□ -0.82
TMEM39A-208ENST00000486159 C2orf27AQ580R0 203 aa9.91□□□□□ -0.82
TMEM39A-208ENST00000486159 PPM1JQ5JR12 505 aa9.91□□□□□ -0.82
TMEM39A-208ENST00000486159 C10orf76Q5T2E6 689 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms