RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 ITM2CQ9NQX7 267 aa20.38■□□□□ 0.85
CHRD-216ENST00000486066 AGPAT3Q9NRZ7 376 aa20.38■□□□□ 0.85
CHRD-216ENST00000486066 OSER1Q9NX31 292 aa20.38■□□□□ 0.85
CHRD-216ENST00000486066 SMC3Q9UQE7 1217 aa20.38■□□□□ 0.85
CHRD-216ENST00000486066 TMEM131Q92545 1883 aa20.38■□□□□ 0.85
CHRD-216ENST00000486066 TENM4Q6N022 2769 aa20.38■□□□□ 0.85
CHRD-216ENST00000486066 NUMA1Q14980 2115 aa20.38■□□□□ 0.85
CHRD-216ENST00000486066 EIF3DO15371 548 aaKnown RBP eCLIP20.37■□□□□ 0.85
CHRD-216ENST00000486066 BEST1O76090 585 aa20.37■□□□□ 0.85
CHRD-216ENST00000486066 DLATP10515 647 aaKnown RBP20.37■□□□□ 0.85
CHRD-216ENST00000486066 IRF1P10914 325 aa20.37■□□□□ 0.85
CHRD-216ENST00000486066 ACO1P21399 889 aaKnown RBP20.37■□□□□ 0.85
CHRD-216ENST00000486066 ATICP31939 592 aa20.37■□□□□ 0.85
CHRD-216ENST00000486066 FUT11Q495W5 492 aa20.37■□□□□ 0.85
CHRD-216ENST00000486066 SDE2Q6IQ49 451 aa20.37■□□□□ 0.85
CHRD-216ENST00000486066 RBBP8NLQ8NC74 664 aaPredicted RBP20.37■□□□□ 0.85
CHRD-216ENST00000486066 ERLEC1Q96DZ1 483 aa20.37■□□□□ 0.85
CHRD-216ENST00000486066 SMARCD1Q96GM5 515 aa20.37■□□□□ 0.85
CHRD-216ENST00000486066 TOE1Q96GM8 510 aaKnown RBP20.37■□□□□ 0.85
CHRD-216ENST00000486066 XPO6Q96QU8 1125 aaKnown RBP20.37■□□□□ 0.85
CHRD-216ENST00000486066 WDR35Q9P2L0 1181 aa20.37■□□□□ 0.85
CHRD-216ENST00000486066 FNDC3AQ9Y2H6 1198 aaKnown RBP20.37■□□□□ 0.85
CHRD-216ENST00000486066 ATMQ13315 3056 aa20.36■□□□□ 0.85
CHRD-216ENST00000486066 NDUFS2O75306 463 aa20.36■□□□□ 0.85
CHRD-216ENST00000486066 TNNI1P19237 187 aa20.36■□□□□ 0.85
CHRD-216ENST00000486066 STAT6P42226 847 aa20.36■□□□□ 0.85
CHRD-216ENST00000486066 CDH8P55286 799 aa20.36■□□□□ 0.85
CHRD-216ENST00000486066 CCDC65Q8IXS2 484 aa20.36■□□□□ 0.85
CHRD-216ENST00000486066 PLEKHO2Q8TD55 490 aa20.36■□□□□ 0.85
CHRD-216ENST00000486066 SDCBP2Q9H190 292 aa20.36■□□□□ 0.85
CHRD-216ENST00000486066 KBTBD4Q9NVX7 518 aa20.36■□□□□ 0.85
CHRD-216ENST00000486066 SLC27A6Q9Y2P4 619 aa20.36■□□□□ 0.85
CHRD-216ENST00000486066 PCDHGB2Q9Y5G2 931 aa20.36■□□□□ 0.85
CHRD-216ENST00000486066 KNTC1P50748 2209 aa20.36■□□□□ 0.85
CHRD-216ENST00000486066 ATP8B3O60423 1300 aa20.35■□□□□ 0.85
CHRD-216ENST00000486066 NCAM1P13591 858 aa20.35■□□□□ 0.85
CHRD-216ENST00000486066 TXLNAP40222 546 aa20.35■□□□□ 0.85
CHRD-216ENST00000486066 DGKGP49619 791 aa20.35■□□□□ 0.85
CHRD-216ENST00000486066 EHHADHQ08426 723 aa20.35■□□□□ 0.85
CHRD-216ENST00000486066 E2F4Q16254 413 aa20.35■□□□□ 0.85
CHRD-216ENST00000486066 CNNM4Q6P4Q7 775 aa20.35■□□□□ 0.85
CHRD-216ENST00000486066 KLHDC10Q6PID8 442 aa20.35■□□□□ 0.85
CHRD-216ENST00000486066 ZCCHC9Q8N567 271 aaKnown RBP20.35■□□□□ 0.85
CHRD-216ENST00000486066 SCFD1Q8WVM8 642 aa20.35■□□□□ 0.85
CHRD-216ENST00000486066 HNRNPLLQ8WVV9 542 aaKnown RBP20.35■□□□□ 0.85
CHRD-216ENST00000486066 KRT82Q9NSB4 513 aa20.35■□□□□ 0.85
CHRD-216ENST00000486066 NXF1Q9UBU9 619 aaKnown RBP20.35■□□□□ 0.85
CHRD-216ENST00000486066 STON1Q9Y6Q2 735 aa20.35■□□□□ 0.85
CHRD-216ENST00000486066 MUC22E2RYF6 1773 aaPredicted RBP20.35■□□□□ 0.85
CHRD-216ENST00000486066 MGAQ8IWI9 3026 aa20.35■□□□□ 0.85
CHRD-216ENST00000486066 A0A087WV48 116 aa20.34■□□□□ 0.85
CHRD-216ENST00000486066 METTL12A8MUP2 240 aa20.34■□□□□ 0.85
CHRD-216ENST00000486066 HHLA1C9JL84 531 aa20.34■□□□□ 0.85
CHRD-216ENST00000486066 ZBTB24O43167 697 aaPredicted RBP20.34■□□□□ 0.85
CHRD-216ENST00000486066 CILPO75339 1184 aa20.34■□□□□ 0.85
CHRD-216ENST00000486066 AP1G2O75843 785 aa20.34■□□□□ 0.85
CHRD-216ENST00000486066 PENKP01210 267 aaPredicted RBP20.34■□□□□ 0.85
CHRD-216ENST00000486066 ATXN1LP0C7T5 689 aaKnown RBP20.34■□□□□ 0.85
CHRD-216ENST00000486066 ZNF132P52740 706 aa20.34■□□□□ 0.85
CHRD-216ENST00000486066 CLDN10P78369 228 aa20.34■□□□□ 0.85
CHRD-216ENST00000486066 KIAA1324Q6UXG2 1013 aaKnown RBP20.34■□□□□ 0.85
CHRD-216ENST00000486066 TPGS1Q6ZTW0 290 aa20.34■□□□□ 0.85
CHRD-216ENST00000486066 STXBP4Q6ZWJ1 553 aa20.34■□□□□ 0.85
CHRD-216ENST00000486066 GPRIN1Q7Z2K8 1008 aa20.34■□□□□ 0.85
CHRD-216ENST00000486066 RDH13Q8NBN7 331 aa20.34■□□□□ 0.85
CHRD-216ENST00000486066 SYAP1Q96A49 352 aaPredicted RBP20.34■□□□□ 0.85
CHRD-216ENST00000486066 CCDC127Q96BQ5 260 aa20.34■□□□□ 0.85
CHRD-216ENST00000486066 GPR174Q9BXC1 333 aa20.34■□□□□ 0.85
CHRD-216ENST00000486066 PANK2Q9BZ23 570 aa20.34■□□□□ 0.85
CHRD-216ENST00000486066 TNMDQ9H2S6 317 aa20.34■□□□□ 0.85
CHRD-216ENST00000486066 GAREM1Q9H706 876 aa20.34■□□□□ 0.85
CHRD-216ENST00000486066 PRDM16Q9HAZ2 1276 aa20.34■□□□□ 0.85
CHRD-216ENST00000486066 TM7SF3Q9NS93 570 aa20.34■□□□□ 0.85
CHRD-216ENST00000486066 THAP10Q9P2Z0 257 aaPredicted RBP20.34■□□□□ 0.85
CHRD-216ENST00000486066 IL12RB1P42701 662 aa20.33■□□□□ 0.85
CHRD-216ENST00000486066 TPMTP51580 245 aa20.33■□□□□ 0.85
CHRD-216ENST00000486066 COPAP53621 1224 aa20.33■□□□□ 0.85
CHRD-216ENST00000486066 SNRPFP62306 86 aaKnown RBP20.33■□□□□ 0.85
CHRD-216ENST00000486066 FAM173BQ6P4H8 233 aa20.33■□□□□ 0.85
CHRD-216ENST00000486066 C12orf56Q8IXR9 622 aa20.33■□□□□ 0.85
CHRD-216ENST00000486066 CRYBG2Q8N1P7 616 aa20.33■□□□□ 0.85
CHRD-216ENST00000486066 XXYLT1Q8NBI6 393 aa20.33■□□□□ 0.85
CHRD-216ENST00000486066 FBXO44Q9H4M3 255 aa20.33■□□□□ 0.85
CHRD-216ENST00000486066 NMUR1Q9HB89 426 aa20.33■□□□□ 0.85
CHRD-216ENST00000486066 TLR8Q9NR97 1041 aaKnown RBP20.33■□□□□ 0.85
CHRD-216ENST00000486066 SCML2Q9UQR0 700 aa20.33■□□□□ 0.85
CHRD-216ENST00000486066 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.33■□□□□ 0.85
CHRD-216ENST00000486066 SLCO1B1Q9Y6L6 691 aa20.33■□□□□ 0.85
CHRD-216ENST00000486066 PTPRQQ9UMZ3 2332 aa20.33■□□□□ 0.84
CHRD-216ENST00000486066 NPC1O15118 1278 aa20.32■□□□□ 0.84
CHRD-216ENST00000486066 BCAT2O15382 392 aaPredicted RBP20.32■□□□□ 0.84
CHRD-216ENST00000486066 CER1O95813 267 aa20.32■□□□□ 0.84
CHRD-216ENST00000486066 CCDC130P13994 396 aa20.32■□□□□ 0.84
CHRD-216ENST00000486066 MFAP3P55082 362 aa20.32■□□□□ 0.84
CHRD-216ENST00000486066 PTPRNQ16849 979 aa20.32■□□□□ 0.84
CHRD-216ENST00000486066 BMT2Q1RMZ1 405 aa20.32■□□□□ 0.84
CHRD-216ENST00000486066 HLA-BQ31612 363 aa20.32■□□□□ 0.84
CHRD-216ENST00000486066 DCAF12L1Q5VU92 463 aa20.32■□□□□ 0.84
CHRD-216ENST00000486066 FYB2Q5VWT5 728 aa20.32■□□□□ 0.84
CHRD-216ENST00000486066 SCUBE3Q8IX30 993 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms