RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 P3H2Q8IVL5 708 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 WDR63Q8IWG1 891 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 RPAP2Q8IXW5 612 aaPredicted RBP4.79□□□□□ -1.64
RTN4-213ENST00000485749 THNSL1Q8IYQ7 743 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 FAM9CQ8IZT9 166 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 SLC7A5P1Q8MH63 180 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 GALNT15Q8N3T1 639 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 AADATQ8N5Z0 425 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 CDYL2Q8N8U2 506 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 C3orf20Q8ND61 904 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 OR10H5Q8NGA6 315 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 MIPOL1Q8TD10 442 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 CALML6Q8TD86 181 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 PIGOQ8TEQ8 1089 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 RNF139Q8WU17 664 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 GAB3Q8WWW8 586 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 CDKL2Q92772 493 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 CALML4Q96GE6 196 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 ATP6V1G3Q96LB4 118 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 TEPSINQ96N21 525 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 CATSPER2Q96P56 530 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 NOX5Q96PH1 765 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 GBP5Q96PP8 586 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 WDR24Q96S15 920 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 CITED2Q99967 270 aaPredicted RBP4.79□□□□□ -1.64
RTN4-213ENST00000485749 PYM1Q9BRP8 204 aaKnown RBP4.79□□□□□ -1.64
RTN4-213ENST00000485749 TBCDQ9BTW9 1192 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 MXD3Q9BW11 206 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 SORBS1Q9BX66 1292 aaKnown RBP4.79□□□□□ -1.64
RTN4-213ENST00000485749 EIF2AQ9BY44 585 aaKnown RBP4.79□□□□□ -1.64
RTN4-213ENST00000485749 KRT23Q9C075 422 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 XYLT2Q9H1B5 865 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 MAGEH1Q9H213 219 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 COPS7BQ9H9Q2 264 aaPredicted RBP4.79□□□□□ -1.64
RTN4-213ENST00000485749 ZMAT3Q9HA38 289 aaKnown RBP4.79□□□□□ -1.64
RTN4-213ENST00000485749 FANCEQ9HB96 536 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 PARVGQ9HBI0 331 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 ZNF287Q9HBT7 754 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 CRLF2Q9HC73 371 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 EIF2B3Q9NR50 452 aaKnown RBP4.79□□□□□ -1.64
RTN4-213ENST00000485749 HOMER3Q9NSC5 361 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 RBM12Q9NTZ6 932 aaKnown RBP4.79□□□□□ -1.64
RTN4-213ENST00000485749 NMRK1Q9NWW6 199 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 ACTR3BQ9P1U1 418 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 UBA2Q9UBT2 640 aaPredicted RBP4.79□□□□□ -1.64
RTN4-213ENST00000485749 MTRF1LQ9UGC7 380 aaKnown RBP4.79□□□□□ -1.64
RTN4-213ENST00000485749 EBF1Q9UH73 591 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 CLEC4AQ9UMR7 237 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 CORO2BQ9UQ03 480 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 MED16Q9Y2X0 877 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 PCDHB6Q9Y5E3 794 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 TAF6LQ9Y6J9 622 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 EVC2Q86UK5 1308 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 MAPKBP1O60336 1514 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 CFAP65Q6ZU64 1925 aaKnown RBP4.78□□□□□ -1.64
RTN4-213ENST00000485749 A0A0A6YYJ9 748 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 A0A1W2PQ27 194 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 A0A1W2PQ64 194 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 A0A1W2PQC6 194 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 A0A1W2PQD8 194 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 ARHGAP10A1A4S6 786 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 PRAMEF22A3QJZ6 481 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 NT5C1B-RDH14C9J2C7 533 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 K7EPI3 171 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 HNRNPDLO14979 420 aaKnown RBP4.78□□□□□ -1.64
RTN4-213ENST00000485749 MAGEB3O15480 346 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 SGPL1O95470 568 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 TMIGD3P0DMS9 266 aaPredicted RBP4.78□□□□□ -1.64
RTN4-213ENST00000485749 FAHP16930 419 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 CDH3P22223 829 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 VIPR1P32241 457 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 HSPA7P48741 367 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 VCPP55072 806 aaKnown RBP4.78□□□□□ -1.64
RTN4-213ENST00000485749 NRG3P56975 720 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 ERVFRD-1P60508 538 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 YBX1P67809 324 aaKnown RBP4.78□□□□□ -1.64
RTN4-213ENST00000485749 HTD2P86397 168 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 FMO1Q01740 532 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 TLE2Q04725 743 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 SPAG1Q07617 926 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 PPARAQ07869 468 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 DBPQ10586 325 aaPredicted RBP4.78□□□□□ -1.64
RTN4-213ENST00000485749 NOGQ13253 232 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 FRG1Q14331 258 aaKnown RBP4.78□□□□□ -1.64
RTN4-213ENST00000485749 SPATS1Q496A3 300 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 CFAP221Q4G0U5 840 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 FBXO47Q5MNV8 452 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 HHATQ5VTY9 493 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 PRAMEF18Q5VWM3 479 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 ARHGAP11AQ6P4F7 1023 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 DRICH1Q6PGQ1 229 aaPredicted RBP4.78□□□□□ -1.64
RTN4-213ENST00000485749 UNQ6494/PRO21346Q6UXR6 183 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 B3GNT6Q6ZMB0 384 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 PRPF39Q86UA1 669 aaKnown RBP4.78□□□□□ -1.64
RTN4-213ENST00000485749 FAM114A1Q8IWE2 563 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 KIAA2013Q8IYS2 634 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 CACNA2D3Q8IZS8 1091 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 TAGAPQ8N103 731 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 ANKRD35Q8N283 1001 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 ATG16L2Q8NAA4 619 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms