RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-210	ENST00000485424		A0A1W2PQD8	194 aa		13.97	□□□□□ -0.17
UBA3-210	ENST00000485424	CDX4	O14627	284 aa	Predicted RBP	13.97	□□□□□ -0.17
UBA3-210	ENST00000485424	BEST1	O76090	585 aa		13.97	□□□□□ -0.17
UBA3-210	ENST00000485424	P2RY2	P41231	377 aa		13.97	□□□□□ -0.17
UBA3-210	ENST00000485424	KIR2DL1	P43626	348 aa	Predicted RBP	13.97	□□□□□ -0.17
UBA3-210	ENST00000485424	DHPS	P49366	369 aa	Predicted RBP	13.97	□□□□□ -0.17
UBA3-210	ENST00000485424	SLC8A3	P57103	927 aa		13.97	□□□□□ -0.17
UBA3-210	ENST00000485424	ENPEP	Q07075	957 aa		13.97	□□□□□ -0.17
UBA3-210	ENST00000485424	SH3PXD2A	Q5TCZ1	1133 aa		13.97	□□□□□ -0.17
UBA3-210	ENST00000485424	KRT39	Q6A163	491 aa		13.97	□□□□□ -0.17
UBA3-210	ENST00000485424	SDE2	Q6IQ49	451 aa		13.97	□□□□□ -0.17
UBA3-210	ENST00000485424	BBS7	Q8IWZ6	715 aa		13.97	□□□□□ -0.17
UBA3-210	ENST00000485424	TTC39C	Q8N584	583 aa		13.97	□□□□□ -0.17
UBA3-210	ENST00000485424	ZMIZ2	Q8NF64	920 aa		13.97	□□□□□ -0.17
UBA3-210	ENST00000485424	RLN3	Q8WXF3	142 aa		13.97	□□□□□ -0.17
UBA3-210	ENST00000485424	ZFR	Q96KR1	1074 aa	Known RBP	13.97	□□□□□ -0.17
UBA3-210	ENST00000485424	HNRNPAB	Q99729	332 aa	Known RBP	13.97	□□□□□ -0.17
UBA3-210	ENST00000485424	TSG101	Q99816	390 aa		13.97	□□□□□ -0.17
UBA3-210	ENST00000485424	TMEM8A	Q9HCN3	771 aa		13.97	□□□□□ -0.17
UBA3-210	ENST00000485424	RMND1	Q9NWS8	449 aa		13.97	□□□□□ -0.17
UBA3-210	ENST00000485424	IL37	Q9NZH6	218 aa		13.97	□□□□□ -0.17
UBA3-210	ENST00000485424	SCML2	Q9UQR0	700 aa		13.97	□□□□□ -0.17
UBA3-210	ENST00000485424	ADAMTS20	P59510	1910 aa		13.97	□□□□□ -0.17
UBA3-210	ENST00000485424	LAMA5	O15230	3695 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	MUC22	E2RYF6	1773 aa	Predicted RBP	13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	KNL1	Q8NG31	2342 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	FAM92A	A1XBS5	289 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	NEDD8-MDP1	E9PL57	170 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	CETN3	O15182	167 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	ADAM23	O75077	832 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	PROS1	P07225	676 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	ZDHHC11B	P0C7U3	371 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	RALA	P11233	206 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	PSEN1	P49768	467 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	MXI1	P50539	228 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	IRX4	P78413	519 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	INCA1	Q0VD86	236 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	FOXC1	Q12948	553 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	ZNF394	Q53GI3	561 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	C10orf76	Q5T2E6	689 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	EMC10	Q5UCC4	262 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	TCERG1L	Q5VWI1	586 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	GRAMD4	Q6IC98	578 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	CLEC20A	Q6ZU45	233 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	LPCAT2	Q7L5N7	544 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	PHTF2	Q8N3S3	785 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	FRMD1	Q8N878	549 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	TAS1R2	Q8TE23	839 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	HMGB4	Q8WW32	186 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	PIGK	Q92643	395 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	HEXIM2	Q96MH2	286 aa	Known RBP	13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	BBS2	Q9BXC9	721 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	PNPLA8	Q9NP80	782 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	EVL	Q9UI08	416 aa	Predicted RBP	13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	MBD1	Q9UIS9	605 aa	Predicted RBP	13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	NAGPA	Q9UK23	515 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	WASF3	Q9UPY6	502 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	ZDHHC9	Q9Y397	364 aa		13.96	□□□□□ -0.17
UBA3-210	ENST00000485424	ATXN2	Q99700	1313 aa	Known RBP	13.95	□□□□□ -0.18
UBA3-210	ENST00000485424		A0A0A0MRY4	1105 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	FAM237A	A0A1B0GTK4	181 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	TCRBV21S2A2	A0A5A6	115 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	C1QTNF9B	B2RNN3	333 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	CYP26A1	O43174	497 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	HOXC11	O43248	304 aa	Predicted RBP	13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	TULP3	O75386	442 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	C1QTNF9	P0C862	333 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	RARG	P13631	454 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	CSRP1	P21291	193 aa	Known RBP	13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	GTF2H1	P32780	548 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	PLA2G4A	P47712	749 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	PPP3CA	Q08209	521 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	EDRF1	Q3B7T1	1238 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	TRIM61	Q5EBN2	209 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	C10orf120	Q5SQS8	335 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	C1orf220	Q5T0J3	134 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	UNQ6494/PRO21346	Q6UXR6	183 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	TPGS1	Q6ZTW0	290 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	ARMCX6	Q7L4S7	300 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	TMEM25	Q86YD3	366 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	ETFBKMT	Q8IXQ9	262 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	TMEFF1	Q8IYR6	380 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	TERB1	Q8NA31	727 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	FBXL13	Q8NEE6	735 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	KCNV2	Q8TDN2	545 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	TWNK	Q96RR1	684 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	CDK5RAP1	Q96SZ6	601 aa	Known RBP	13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	DUSP9	Q99956	384 aa	Known RBP	13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	APOBEC3G	Q9HC16	384 aa	Known RBP	13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	GDPD2	Q9HCC8	539 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	CYLD	Q9NQC7	956 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	DNAJC17	Q9NVM6	304 aa	Known RBP	13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	WDR35	Q9P2L0	1181 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	HOOK1	Q9UJC3	728 aa	Known RBP	13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	DNMT3L	Q9UJW3	386 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	CABIN1	Q9Y6J0	2220 aa		13.95	□□□□□ -0.18
UBA3-210	ENST00000485424	PLXNA2	O75051	1894 aa		13.95	□□□□□ -0.18

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