RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 STRIP2Q9ULQ0 834 aa18.62■□□□□ 0.57
SREBF1-213ENST00000485080 SIT1Q9Y3P8 196 aa18.62■□□□□ 0.57
SREBF1-213ENST00000485080 GFPT2O94808 682 aa18.61■□□□□ 0.57
SREBF1-213ENST00000485080 LTFP02788 710 aa18.61■□□□□ 0.57
SREBF1-213ENST00000485080 MAGEA9P43362 315 aa18.61■□□□□ 0.57
SREBF1-213ENST00000485080 VCPP55072 806 aaKnown RBP18.61■□□□□ 0.57
SREBF1-213ENST00000485080 UBASH3AP57075 661 aa18.61■□□□□ 0.57
SREBF1-213ENST00000485080 CDR2Q01850 454 aa18.61■□□□□ 0.57
SREBF1-213ENST00000485080 NR1H3Q13133 447 aa18.61■□□□□ 0.57
SREBF1-213ENST00000485080 Q6ZNB5 142 aa18.61■□□□□ 0.57
SREBF1-213ENST00000485080 RSRC2Q7L4I2 434 aaKnown RBP18.61■□□□□ 0.57
SREBF1-213ENST00000485080 ZDHHC17Q8IUH5 632 aa18.61■□□□□ 0.57
SREBF1-213ENST00000485080 TMEM105Q8N8V8 129 aa18.61■□□□□ 0.57
SREBF1-213ENST00000485080 FAM3CQ92520 227 aa18.61■□□□□ 0.57
SREBF1-213ENST00000485080 BAP1Q92560 729 aa18.61■□□□□ 0.57
SREBF1-213ENST00000485080 CPXM1Q96SM3 734 aa18.61■□□□□ 0.57
SREBF1-213ENST00000485080 DCLK3Q9C098 648 aa18.61■□□□□ 0.57
SREBF1-213ENST00000485080 TTYH3Q9C0H2 523 aa18.61■□□□□ 0.57
SREBF1-213ENST00000485080 ASNSD1Q9NWL6 643 aa18.61■□□□□ 0.57
SREBF1-213ENST00000485080 DLGAP2Q9P1A6 1054 aa18.61■□□□□ 0.57
SREBF1-213ENST00000485080 NUDT5Q9UKK9 219 aa18.61■□□□□ 0.57
SREBF1-213ENST00000485080 ZNF510Q9Y2H8 683 aa18.61■□□□□ 0.57
SREBF1-213ENST00000485080 SH3BP1Q9Y3L3 701 aa18.61■□□□□ 0.57
SREBF1-213ENST00000485080 HBS1LQ9Y450 684 aaKnown RBP18.61■□□□□ 0.57
SREBF1-213ENST00000485080 KMT2EQ8IZD2 1858 aa18.6■□□□□ 0.57
SREBF1-213ENST00000485080 MDM4O15151 490 aa18.6■□□□□ 0.57
SREBF1-213ENST00000485080 STC2O76061 302 aa18.6■□□□□ 0.57
SREBF1-213ENST00000485080 FYNP06241 537 aa18.6■□□□□ 0.57
SREBF1-213ENST00000485080 CCDC172P0C7W6 258 aa18.6■□□□□ 0.57
SREBF1-213ENST00000485080 TARSP26639 723 aaKnown RBP18.6■□□□□ 0.57
SREBF1-213ENST00000485080 RPS9P46781 194 aaKnown RBP18.6■□□□□ 0.57
SREBF1-213ENST00000485080 GABRB2P47870 512 aa18.6■□□□□ 0.57
SREBF1-213ENST00000485080 EFEMP1Q12805 493 aa18.6■□□□□ 0.57
SREBF1-213ENST00000485080 FZD5Q13467 585 aa18.6■□□□□ 0.57
SREBF1-213ENST00000485080 TRIM72Q6ZMU5 477 aa18.6■□□□□ 0.57
SREBF1-213ENST00000485080 CACNA2D4Q7Z3S7 1137 aa18.6■□□□□ 0.57
SREBF1-213ENST00000485080 PASD1Q8IV76 773 aa18.6■□□□□ 0.57
SREBF1-213ENST00000485080 CCDC105Q8IYK2 499 aa18.6■□□□□ 0.57
SREBF1-213ENST00000485080 C1orf131Q8NDD1 294 aaKnown RBP18.6■□□□□ 0.57
SREBF1-213ENST00000485080 CLEC4CQ8WTT0 213 aa18.6■□□□□ 0.57
SREBF1-213ENST00000485080 RNF139Q8WU17 664 aa18.6■□□□□ 0.57
SREBF1-213ENST00000485080 GOLGA1Q92805 767 aa18.6■□□□□ 0.57
SREBF1-213ENST00000485080 WBP2Q969T9 261 aa18.6■□□□□ 0.57
SREBF1-213ENST00000485080 IQCDQ96DY2 449 aa18.6■□□□□ 0.57
SREBF1-213ENST00000485080 CHFRQ96EP1 664 aa18.6■□□□□ 0.57
SREBF1-213ENST00000485080 PRRX2Q99811 253 aa18.6■□□□□ 0.57
SREBF1-213ENST00000485080 FOXQ1Q9C009 403 aa18.6■□□□□ 0.57
SREBF1-213ENST00000485080 MIS12Q9H081 205 aa18.6■□□□□ 0.57
SREBF1-213ENST00000485080 LSM7Q9UK45 103 aaKnown RBP18.6■□□□□ 0.57
SREBF1-213ENST00000485080 ARIH1Q9Y4X5 557 aaPredicted RBP18.6■□□□□ 0.57
SREBF1-213ENST00000485080 FAM170BA6NMN3 283 aa18.59■□□□□ 0.57
SREBF1-213ENST00000485080 PIK3R2O00459 728 aa18.59■□□□□ 0.57
SREBF1-213ENST00000485080 STK25O00506 426 aa18.59■□□□□ 0.57
SREBF1-213ENST00000485080 TRDMT1O14717 391 aaKnown RBP18.59■□□□□ 0.57
SREBF1-213ENST00000485080 NCAM2O15394 837 aa18.59■□□□□ 0.57
SREBF1-213ENST00000485080 PI15O43692 258 aa18.59■□□□□ 0.57
SREBF1-213ENST00000485080 CYP1A1P04798 512 aaPredicted RBP18.59■□□□□ 0.57
SREBF1-213ENST00000485080 FERP16591 822 aa18.59■□□□□ 0.57
SREBF1-213ENST00000485080 CHRNB2P17787 502 aa18.59■□□□□ 0.57
SREBF1-213ENST00000485080 GJA4P35212 333 aa18.59■□□□□ 0.57
SREBF1-213ENST00000485080 SCNN1AP37088 669 aa18.59■□□□□ 0.57
SREBF1-213ENST00000485080 SOX9P48436 509 aa18.59■□□□□ 0.57
SREBF1-213ENST00000485080 NNTQ13423 1086 aa18.59■□□□□ 0.57
SREBF1-213ENST00000485080 TRIP4Q15650 581 aaPredicted RBP18.59■□□□□ 0.57
SREBF1-213ENST00000485080 PTPN20Q4JDL3 420 aa18.59■□□□□ 0.57
SREBF1-213ENST00000485080 TXNDC11Q6PKC3 985 aa18.59■□□□□ 0.57
SREBF1-213ENST00000485080 MIB1Q86YT6 1006 aa18.59■□□□□ 0.57
SREBF1-213ENST00000485080 EXOC4Q96A65 974 aa18.59■□□□□ 0.57
SREBF1-213ENST00000485080 PLD4Q96BZ4 506 aa18.59■□□□□ 0.57
SREBF1-213ENST00000485080 NUP58Q9BVL2 599 aa18.59■□□□□ 0.57
SREBF1-213ENST00000485080 PDCL3Q9H2J4 239 aa18.59■□□□□ 0.57
SREBF1-213ENST00000485080 RASAL2Q9UJF2 1139 aa18.59■□□□□ 0.57
SREBF1-213ENST00000485080 CACNA1IQ9P0X4 2223 aa18.58■□□□□ 0.57
SREBF1-213ENST00000485080 ADH1CP00326 375 aa18.58■□□□□ 0.56
SREBF1-213ENST00000485080 CYP17A1P05093 508 aa18.58■□□□□ 0.56
SREBF1-213ENST00000485080 MMEP08473 750 aa18.58■□□□□ 0.56
SREBF1-213ENST00000485080 CD72P21854 359 aa18.58■□□□□ 0.56
SREBF1-213ENST00000485080 YWHAZP63104 245 aaKnown RBP18.58■□□□□ 0.56
SREBF1-213ENST00000485080 NOMO3P69849 1222 aa18.58■□□□□ 0.56
SREBF1-213ENST00000485080 FMO1Q01740 532 aa18.58■□□□□ 0.56
SREBF1-213ENST00000485080 RING1Q06587 406 aa18.58■□□□□ 0.56
SREBF1-213ENST00000485080 UBXN2BQ14CS0 331 aa18.58■□□□□ 0.56
SREBF1-213ENST00000485080 DHCR24Q15392 516 aa18.58■□□□□ 0.56
SREBF1-213ENST00000485080 EFHC1Q5JVL4 640 aa18.58■□□□□ 0.56
SREBF1-213ENST00000485080 RHBDF2Q6PJF5 856 aa18.58■□□□□ 0.56
SREBF1-213ENST00000485080 MAMSTRQ6ZN01 415 aa18.58■□□□□ 0.56
SREBF1-213ENST00000485080 IRF2BP2Q7Z5L9 587 aa18.58■□□□□ 0.56
SREBF1-213ENST00000485080 BBS7Q8IWZ6 715 aa18.58■□□□□ 0.56
SREBF1-213ENST00000485080 ZNF397Q8NF99 534 aaPredicted RBP18.58■□□□□ 0.56
SREBF1-213ENST00000485080 IPO4Q8TEX9 1081 aaKnown RBP18.58■□□□□ 0.56
SREBF1-213ENST00000485080 EDEM1Q92611 657 aa18.58■□□□□ 0.56
SREBF1-213ENST00000485080 IER2Q9BTL4 223 aa18.58■□□□□ 0.56
SREBF1-213ENST00000485080 POPDC2Q9HBU9 364 aa18.58■□□□□ 0.56
SREBF1-213ENST00000485080 AIPL1Q9NZN9 384 aa18.58■□□□□ 0.56
SREBF1-213ENST00000485080 MTF2Q9Y483 593 aaPredicted RBP18.58■□□□□ 0.56
SREBF1-213ENST00000485080 MIA3Q5JRA6 1907 aa18.58■□□□□ 0.56
SREBF1-213ENST00000485080 COL4A3Q01955 1670 aa18.57■□□□□ 0.56
SREBF1-213ENST00000485080 A0A1W2PQJ5 194 aa18.57■□□□□ 0.56
SREBF1-213ENST00000485080 HOXC11O43248 304 aaPredicted RBP18.57■□□□□ 0.56
SREBF1-213ENST00000485080 HSF2BPO75031 334 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms