RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 EHBP1Q8NDI1 1231 aa10.55□□□□□ -0.72
CPSF4-213ENST00000484112 LMO3Q8TAP4 145 aa10.55□□□□□ -0.72
CPSF4-213ENST00000484112 HMGB4Q8WW32 186 aa10.55□□□□□ -0.72
CPSF4-213ENST00000484112 ZCCHC14Q8WYQ9 949 aaKnown RBP10.55□□□□□ -0.72
CPSF4-213ENST00000484112 OVCA2Q8WZ82 227 aa10.55□□□□□ -0.72
CPSF4-213ENST00000484112 TMEM176AQ96HP8 235 aa10.55□□□□□ -0.72
CPSF4-213ENST00000484112 SPACA7Q96KW9 195 aa10.55□□□□□ -0.72
CPSF4-213ENST00000484112 TTLL2Q9BWV7 592 aa10.55□□□□□ -0.72
CPSF4-213ENST00000484112 TMEM121BQ9BXQ6 578 aaPredicted RBP10.55□□□□□ -0.72
CPSF4-213ENST00000484112 B3GNT5Q9BYG0 378 aa10.55□□□□□ -0.72
CPSF4-213ENST00000484112 DPEP3Q9H4B8 488 aa10.55□□□□□ -0.72
CPSF4-213ENST00000484112 CSNK1G1Q9HCP0 422 aa10.55□□□□□ -0.72
CPSF4-213ENST00000484112 POLMQ9NP87 494 aaPredicted RBP10.55□□□□□ -0.72
CPSF4-213ENST00000484112 DMAP1Q9NPF5 467 aaPredicted RBP10.55□□□□□ -0.72
CPSF4-213ENST00000484112 FSCN3Q9NQT6 498 aa10.55□□□□□ -0.72
CPSF4-213ENST00000484112 CISHQ9NSE2 258 aa10.55□□□□□ -0.72
CPSF4-213ENST00000484112 TMEM74BQ9NUR3 256 aa10.55□□□□□ -0.72
CPSF4-213ENST00000484112 SMPD4Q9NXE4 827 aa10.55□□□□□ -0.72
CPSF4-213ENST00000484112 THADAQ6YHU6 1953 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 SPAARA0A1B0GVQ0 90 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 TMEM8BA6NDV4 472 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 SGK1O00141 431 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 OBSL1O75147 1896 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 KAT7O95251 611 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 APODP05090 189 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 CYP17A1P05093 508 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 CFIP05156 583 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 TPM2P07951 284 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 PAEPP09466 180 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 TCF3P15923 654 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 ENGP17813 658 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 P2RY2P41231 377 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 MTIF2P46199 727 aaKnown RBP10.54□□□□□ -0.72
CPSF4-213ENST00000484112 ATXN3P54252 364 aaPredicted RBP10.54□□□□□ -0.72
CPSF4-213ENST00000484112 SLC8A3P57103 927 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 USP46P62068 366 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 KDSRQ06136 332 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 IFRD2Q12894 506 aaPredicted RBP10.54□□□□□ -0.72
CPSF4-213ENST00000484112 DHCR24Q15392 516 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 STILQ15468 1287 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 GAB4Q2WGN9 574 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 GBP6Q6ZN66 633 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 ACOT1Q86TX2 421 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 FAM35AQ86V20 835 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 ADGRG2Q8IZP9 1017 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 FUKQ8N0W3 1084 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 NUP93Q8N1F7 819 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 KIAA1958Q8N8K9 716 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 PDZD8Q8NEN9 1154 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 OLIG1Q8TAK6 271 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 WHAMMQ8TF30 809 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 GATA6Q92908 595 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 CYFIP2Q96F07 1278 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 PNKPQ96T60 521 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 BPIFA3Q9BQP9 254 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 GTPBP2Q9BX10 602 aaKnown RBP10.54□□□□□ -0.72
CPSF4-213ENST00000484112 UBXN6Q9BZV1 441 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 RNF38Q9H0F5 515 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 FBXO44Q9H4M3 255 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 EVLQ9UI08 416 aaPredicted RBP10.54□□□□□ -0.72
CPSF4-213ENST00000484112 NFE2L3Q9Y4A8 694 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 DAAM1Q9Y4D1 1078 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 CPQQ9Y646 472 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 PTPRDP23468 1912 aa10.54□□□□□ -0.72
CPSF4-213ENST00000484112 TCRBV21S2A2A0A5A6 115 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 FAM92AA1XBS5 289 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 F8VP50 259 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 TNFRSF10BO14763 440 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 FAM200BP0CF97 657 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 MBL2P11226 248 aaPredicted RBP10.53□□□□□ -0.72
CPSF4-213ENST00000484112 CD58P19256 250 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 SIM1P81133 766 aaPredicted RBP10.53□□□□□ -0.72
CPSF4-213ENST00000484112 MYL5Q02045 173 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 MESP2Q0VG99 397 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 EXOC3L4Q17RC7 722 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 VWA3BQ502W6 1294 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 EOGTQ5NDL2 527 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 LYSMD4Q5XG99 296 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 ARHGAP17Q68EM7 881 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 RHBDF2Q6PJF5 856 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 PAQR9Q6ZVX9 377 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 C12orf40Q86WS4 652 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 SYT12Q8IV01 421 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 PPM1KQ8N3J5 372 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 HDDC3Q8N4P3 179 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 UBR7Q8N806 425 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 IL17RCQ8NAC3 791 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 ANKRD20A12PQ8NF67 263 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 SLC2A14Q8TDB8 520 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 TATDN2Q93075 761 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 SLITRK1Q96PX8 696 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 TUBGCP2Q9BSJ2 902 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 MED10Q9BTT4 135 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 ZNF518BQ9C0D4 1074 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 NDST4Q9H3R1 872 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 ARHGEF4Q9NR80 690 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 IL37Q9NZH6 218 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 TMEM63CQ9P1W3 806 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 CFAP97Q9P2B7 532 aa10.53□□□□□ -0.72
CPSF4-213ENST00000484112 MBD1Q9UIS9 605 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms