RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 NMUR1Q9HB89 426 aa9.13□□□□□ -0.95
RTFDC1-208ENST00000484084 CYLDQ9NQC7 956 aa9.13□□□□□ -0.95
RTFDC1-208ENST00000484084 HSPBP1Q9NZL4 362 aa9.13□□□□□ -0.95
RTFDC1-208ENST00000484084 STK17AQ9UEE5 414 aa9.13□□□□□ -0.95
RTFDC1-208ENST00000484084 SUSD2Q9UGT4 822 aa9.13□□□□□ -0.95
RTFDC1-208ENST00000484084 APOBEC2Q9Y235 224 aaKnown RBP9.13□□□□□ -0.95
RTFDC1-208ENST00000484084 SH3BP1Q9Y3L3 701 aa9.13□□□□□ -0.95
RTFDC1-208ENST00000484084 PCDHB9Q9Y5E1 797 aa9.13□□□□□ -0.95
RTFDC1-208ENST00000484084 PCDHB13Q9Y5F0 798 aa9.13□□□□□ -0.95
RTFDC1-208ENST00000484084 PCDHGB2Q9Y5G2 931 aa9.13□□□□□ -0.95
RTFDC1-208ENST00000484084 ZNF233A6NK53 670 aa9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 A8MXQ7 604 aa9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 C10orf142B7Z368 130 aa9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 TULP1O00294 542 aaPredicted RBP9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 BCAT2O15382 392 aaPredicted RBP9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 TLR5O60602 858 aa9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 RTN3O95197 1032 aaPredicted RBP9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 PENKP01210 267 aaPredicted RBP9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 TNNC2P02585 160 aa9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 IRF1P10914 325 aa9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 ITPKBP27987 946 aa9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 MFAP3P55082 362 aa9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 PSMD6Q15008 389 aa9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 KIF19Q2TAC6 998 aa9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 WDR45BQ5MNZ6 344 aa9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 FYB2Q5VWT5 728 aa9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 SETD7Q8WTS6 366 aaKnown RBP9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 PIWIL1Q96J94 861 aaKnown RBP9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 SNX25Q9H3E2 840 aa9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 PRORYQ9H606 182 aa9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 VRTNQ9H8Y1 702 aa9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 PRDM16Q9HAZ2 1276 aa9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 PANK4Q9NVE7 773 aa9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 PLK2Q9NYY3 685 aa9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 THAP10Q9P2Z0 257 aaPredicted RBP9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 HMGXB4Q9UGU5 601 aa9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 EIF2B4Q9UI10 523 aaKnown RBP9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 SLC27A6Q9Y2P4 619 aa9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 SRPRBQ9Y5M8 271 aaKnown RBP9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 RAI2Q9Y5P3 530 aa9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 SNX11Q9Y5W9 270 aa9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 URB1O60287 2271 aaKnown RBP9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 MGAQ8IWI9 3026 aa9.12□□□□□ -0.95
RTFDC1-208ENST00000484084 COL5A1P20908 1838 aaPredicted RBP9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 A0A1B0GVT2 93 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 KCNK3O14649 394 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 KIAA0391O15091 583 aaKnown RBP9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 MDM4O15151 490 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 TLX3O43711 291 aaPredicted RBP9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 NDUFS2O75306 463 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 VNN1O95497 513 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 GNSP15586 552 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 PRKCHP24723 683 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 DGKGP49619 791 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 CASP4P49662 377 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 CSNK1EP49674 416 aaKnown RBP9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 CLDN6P56747 220 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 CLDN10P78369 228 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 CYP24A1Q07973 514 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 EHHADHQ08426 723 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 ORC1Q13415 861 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 ALCAMQ13740 583 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 E2F4Q16254 413 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 SNRNP35Q16560 246 aaKnown RBP9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 SYCP2LQ5T4T6 812 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 RRAGBQ5VZM2 374 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 FAM173BQ6P4H8 233 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 LAYNQ6UX15 382 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 KIAA1324Q6UXG2 1013 aaKnown RBP9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 SV2BQ7L1I2 683 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 SCD5Q86SK9 330 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 TMPRSS6Q8IU80 811 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 SYCP3Q8IZU3 236 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 RDH13Q8NBN7 331 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 ZNF507Q8TCN5 953 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 NOC3LQ8WTT2 800 aaKnown RBP9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 SORCS1Q8WY21 1168 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 CGRRF1Q99675 332 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 PANK2Q9BZ23 570 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 C6orf106Q9H6K1 298 aaPredicted RBP9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 AGPAT3Q9NRZ7 376 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 COMMD8Q9NX08 183 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 WDR35Q9P2L0 1181 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 NUDT5Q9UKK9 219 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 SHROOM3Q8TF72 1996 aa9.11□□□□□ -0.95
RTFDC1-208ENST00000484084 ATXN7O15265 892 aaPredicted RBP9.1□□□□□ -0.95
RTFDC1-208ENST00000484084 FLRT2O43155 660 aa9.1□□□□□ -0.95
RTFDC1-208ENST00000484084 CYP26A1O43174 497 aa9.1□□□□□ -0.95
RTFDC1-208ENST00000484084 STC2O76061 302 aa9.1□□□□□ -0.95
RTFDC1-208ENST00000484084 BMP15O95972 392 aa9.1□□□□□ -0.95
RTFDC1-208ENST00000484084 C4BPAP04003 597 aaKnown RBP9.1□□□□□ -0.95
RTFDC1-208ENST00000484084 DLATP10515 647 aaKnown RBP9.1□□□□□ -0.95
RTFDC1-208ENST00000484084 CCDC130P13994 396 aa9.1□□□□□ -0.95
RTFDC1-208ENST00000484084 PLA2G2AP14555 144 aa9.1□□□□□ -0.95
RTFDC1-208ENST00000484084 IDEP14735 1019 aa9.1□□□□□ -0.95
RTFDC1-208ENST00000484084 ACSL1P33121 698 aa9.1□□□□□ -0.95
RTFDC1-208ENST00000484084 EIF2S3P41091 472 aaKnown RBP9.1□□□□□ -0.95
RTFDC1-208ENST00000484084 MATKP42679 507 aa9.1□□□□□ -0.95
RTFDC1-208ENST00000484084 SHBQ15464 509 aa9.1□□□□□ -0.95
RTFDC1-208ENST00000484084 SURF1Q15526 300 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms