RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 KANSL2Q9H9L4 492 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 KCNK4Q9NYG8 393 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 RUVBL2Q9Y230 463 aaKnown RBP10.54□□□□□ -0.72
COL12A1-207ENST00000483888 ECE2O60344 883 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 CCNE2O96020 404 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 RPA3P35244 121 aaPredicted RBP10.54□□□□□ -0.72
COL12A1-207ENST00000483888 ATP2C1P98194 919 aaPredicted RBP10.54□□□□□ -0.72
COL12A1-207ENST00000483888 FAM83EQ2M2I3 478 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 ARSHQ5FYA8 562 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 TNFAIP8L3Q5GJ75 292 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 OLFML2AQ68BL7 652 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 C11orf63Q6NUN7 778 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 ZNF605Q86T29 641 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 GPD1LQ8N335 351 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 CHURC1Q8WUH1 139 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 CNKSR1Q969H4 720 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 PHF12Q96QT6 1004 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 PP2D1A8MPX8 630 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 SNAP23O00161 211 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 NELFEP18615 380 aaKnown RBP10.53□□□□□ -0.72
COL12A1-207ENST00000483888 ADD2P35612 726 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 PHKA1P46020 1223 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 SAMD4BQ5PRF9 694 aaKnown RBP10.53□□□□□ -0.72
COL12A1-207ENST00000483888 KCTD1Q719H9 257 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 KDELC2Q7Z4H8 507 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 DFFAO00273 331 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 KPNA5O15131 536 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 PSIP1O75475 530 aaKnown RBP10.53□□□□□ -0.72
COL12A1-207ENST00000483888 CSPG5O95196 566 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 MLNP12872 115 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 MSH3P20585 1137 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 FAM228AQ86W67 206 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 KCND1Q9NSA2 647 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 METTL21EPA6NDL7 271 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 ZNF879B4DU55 563 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 PTPN7P35236 360 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 NPTX2P47972 431 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 FASTKQ14296 549 aaKnown RBP10.53□□□□□ -0.72
COL12A1-207ENST00000483888 SYTL3Q4VX76 610 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 RPF1Q9H9Y2 349 aaKnown RBP10.53□□□□□ -0.72
COL12A1-207ENST00000483888 KIAA0586Q9BVV6 1533 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 PGK2P07205 417 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 TCF4P15884 667 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 GRK3P35626 688 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 MAZP56270 477 aaKnown RBP10.53□□□□□ -0.72
COL12A1-207ENST00000483888 ATP6AP1LQ52LC2 224 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 LPCAT4Q643R3 524 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 PLET1Q6UQ28 207 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 AP3S1Q92572 193 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 FADS3Q9Y5Q0 445 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 TRIM64A6NGJ6 449 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 TRIM64BA6NI03 449 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 E7ENX8 843 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 M0QX08 132 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 CTSWP56202 376 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 RPS7P62081 194 aaKnown RBP10.53□□□□□ -0.72
COL12A1-207ENST00000483888 UBXN2AP68543 259 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 CYP4F2P78329 520 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 CYP4F3Q08477 520 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 TFDP1Q14186 410 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 LRRC24Q50LG9 513 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 LIN54Q6MZP7 749 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 ZFAND2BQ8WV99 257 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 PIGSQ96S52 555 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 ALDH8A1Q9H2A2 487 aaPredicted RBP10.53□□□□□ -0.72
COL12A1-207ENST00000483888 TTYH1Q9H313 450 aaPredicted RBP10.53□□□□□ -0.72
COL12A1-207ENST00000483888 STARD7Q9NQZ5 370 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 ZNF112Q9UJU3 913 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 ABCA5Q8WWZ7 1642 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 KATNA1O75449 491 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 UGT2B28Q9BY64 529 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 RAB26Q9ULW5 256 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 SIK3Q9Y2K2 1263 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 ARF4P18085 180 aaPredicted RBP10.53□□□□□ -0.72
COL12A1-207ENST00000483888 PTENP60484 403 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 NCOA4Q13772 614 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 ELMOD2Q8IZ81 293 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 SAMD3Q8N6K7 520 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 ZBTB38Q8NAP3 1195 aaPredicted RBP10.53□□□□□ -0.72
COL12A1-207ENST00000483888 SLC7A3Q8WY07 619 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 FUCA2Q9BTY2 467 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 MMTAG2Q9BU76 263 aaKnown RBP10.53□□□□□ -0.72
COL12A1-207ENST00000483888 CLEC11AQ9Y240 323 aa10.53□□□□□ -0.72
COL12A1-207ENST00000483888 hCG_1984214I3L0E3 225 aa10.52□□□□□ -0.72
COL12A1-207ENST00000483888 INO80B-WBP1J3KQ70 363 aa10.52□□□□□ -0.72
COL12A1-207ENST00000483888 PIK3CDO00329 1044 aa10.52□□□□□ -0.72
COL12A1-207ENST00000483888 ERCC2P18074 760 aa10.52□□□□□ -0.72
COL12A1-207ENST00000483888 SPDYCQ5MJ68 293 aa10.52□□□□□ -0.72
COL12A1-207ENST00000483888 CCDC185Q8N715 623 aa10.52□□□□□ -0.72
COL12A1-207ENST00000483888 ZNF713Q8N859 430 aaPredicted RBP10.52□□□□□ -0.72
COL12A1-207ENST00000483888 INO80BQ9C086 356 aaPredicted RBP10.52□□□□□ -0.72
COL12A1-207ENST00000483888 MED28Q9H204 178 aa10.52□□□□□ -0.72
COL12A1-207ENST00000483888 MCUBQ9NWR8 336 aa10.52□□□□□ -0.72
COL12A1-207ENST00000483888 UBAP1LF5GYI3 381 aa10.52□□□□□ -0.72
COL12A1-207ENST00000483888 GSTM1P09488 218 aa10.52□□□□□ -0.72
COL12A1-207ENST00000483888 SLC25A3Q00325 362 aa10.52□□□□□ -0.72
COL12A1-207ENST00000483888 AAGABQ6PD74 315 aa10.52□□□□□ -0.72
COL12A1-207ENST00000483888 SPAG16Q8N0X2 631 aa10.52□□□□□ -0.72
COL12A1-207ENST00000483888 ATG4AQ8WYN0 398 aa10.52□□□□□ -0.72
COL12A1-207ENST00000483888 OSBP2Q969R2 916 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms